RNA–Protein interactions for RNA: ENST00000354441.10

TTC8-204, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 1 (best) BASIC

Gene TTC8, Length 1,342 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-204ENST00000354441 AEBP2Q6ZN18 517 aaPredicted RBP27.93■■■□□ 2.06
TTC8-204ENST00000354441 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
TTC8-204ENST00000354441 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
TTC8-204ENST00000354441 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
TTC8-204ENST00000354441 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
TTC8-204ENST00000354441 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
TTC8-204ENST00000354441 FOXD1Q16676 465 aa22.2■■□□□ 1.14
TTC8-204ENST00000354441 ABCC9O60706 1549 aa21.67■■□□□ 1.06
TTC8-204ENST00000354441 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
TTC8-204ENST00000354441 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
TTC8-204ENST00000354441 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
TTC8-204ENST00000354441 NACADO15069 1562 aa20.99■□□□□ 0.95
TTC8-204ENST00000354441 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
TTC8-204ENST00000354441 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
TTC8-204ENST00000354441 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
TTC8-204ENST00000354441 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
TTC8-204ENST00000354441 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
TTC8-204ENST00000354441 MSH5O43196 834 aa20.68■□□□□ 0.9
TTC8-204ENST00000354441 PIAS4Q8N2W9 510 aaPredicted RBP20.64■□□□□ 0.89
TTC8-204ENST00000354441 ADRA2BP18089 450 aa20.61■□□□□ 0.89
TTC8-204ENST00000354441 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
TTC8-204ENST00000354441 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
TTC8-204ENST00000354441 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
TTC8-204ENST00000354441 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
TTC8-204ENST00000354441 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
TTC8-204ENST00000354441 CECR2Q9BXF3 1484 aa19.82■□□□□ 0.76
TTC8-204ENST00000354441 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
TTC8-204ENST00000354441 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
TTC8-204ENST00000354441 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
TTC8-204ENST00000354441 BAZ1AQ9NRL2 1556 aaPredicted RBP19.65■□□□□ 0.74
TTC8-204ENST00000354441 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
TTC8-204ENST00000354441 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
TTC8-204ENST00000354441 WIZO95785 1651 aa19.51■□□□□ 0.71
TTC8-204ENST00000354441 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
TTC8-204ENST00000354441 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
TTC8-204ENST00000354441 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
TTC8-204ENST00000354441 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
TTC8-204ENST00000354441 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
TTC8-204ENST00000354441 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
TTC8-204ENST00000354441 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
TTC8-204ENST00000354441 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
TTC8-204ENST00000354441 SUPT5HO00267 1087 aaKnown RBP19.21■□□□□ 0.67
TTC8-204ENST00000354441 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
TTC8-204ENST00000354441 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
TTC8-204ENST00000354441 NESP48681 1621 aa18.91■□□□□ 0.62
TTC8-204ENST00000354441 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
TTC8-204ENST00000354441 LAMC3Q9Y6N6 1575 aa18.82■□□□□ 0.6
TTC8-204ENST00000354441 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
TTC8-204ENST00000354441 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
TTC8-204ENST00000354441 CFTRP13569 1480 aa18.79■□□□□ 0.6
TTC8-204ENST00000354441 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
TTC8-204ENST00000354441 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
TTC8-204ENST00000354441 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
TTC8-204ENST00000354441 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
TTC8-204ENST00000354441 ERCC6Q03468 1493 aa18.57■□□□□ 0.56
TTC8-204ENST00000354441 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
TTC8-204ENST00000354441 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
TTC8-204ENST00000354441 ABCC8Q09428 1581 aa18.49■□□□□ 0.55
TTC8-204ENST00000354441 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
TTC8-204ENST00000354441 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
TTC8-204ENST00000354441 WDR62O43379 1518 aa18.43■□□□□ 0.54
TTC8-204ENST00000354441 CUX1P39880 1505 aa18.42■□□□□ 0.54
TTC8-204ENST00000354441 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
TTC8-204ENST00000354441 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
TTC8-204ENST00000354441 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
TTC8-204ENST00000354441 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
TTC8-204ENST00000354441 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
TTC8-204ENST00000354441 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
TTC8-204ENST00000354441 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.52
TTC8-204ENST00000354441 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
TTC8-204ENST00000354441 CUX2O14529 1486 aa18.27■□□□□ 0.51
TTC8-204ENST00000354441 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
TTC8-204ENST00000354441 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
TTC8-204ENST00000354441 TARBP1Q13395 1621 aaKnown RBP18.22■□□□□ 0.51
TTC8-204ENST00000354441 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
TTC8-204ENST00000354441 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
TTC8-204ENST00000354441 KCNA4P22459 653 aa18.19■□□□□ 0.5
TTC8-204ENST00000354441 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
TTC8-204ENST00000354441 SOGA1O94964 1423 aa18.12■□□□□ 0.49
TTC8-204ENST00000354441 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
TTC8-204ENST00000354441 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.49
TTC8-204ENST00000354441 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
TTC8-204ENST00000354441 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
TTC8-204ENST00000354441 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
TTC8-204ENST00000354441 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
TTC8-204ENST00000354441 PBRM1Q86U86 1689 aa18.02■□□□□ 0.48
TTC8-204ENST00000354441 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.47
TTC8-204ENST00000354441 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
TTC8-204ENST00000354441 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
TTC8-204ENST00000354441 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
TTC8-204ENST00000354441 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
TTC8-204ENST00000354441 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
TTC8-204ENST00000354441 GAPVD1Q14C86 1478 aa17.94■□□□□ 0.46
TTC8-204ENST00000354441 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
TTC8-204ENST00000354441 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
TTC8-204ENST00000354441 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
TTC8-204ENST00000354441 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
TTC8-204ENST00000354441 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
TTC8-204ENST00000354441 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
TTC8-204ENST00000354441 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms