RNA–Protein interactions for RNA: ENST00000350501.9

GRHL3-202, Transcript of grainyhead like transcription factor 3, humanhuman

TSL 2 BASIC

Gene GRHL3, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRHL3-202ENST00000350501 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
GRHL3-202ENST00000350501 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
GRHL3-202ENST00000350501 ABCC9O60706 1549 aa23.55■■□□□ 1.36
GRHL3-202ENST00000350501 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
GRHL3-202ENST00000350501 NACADO15069 1562 aa22.49■■□□□ 1.19
GRHL3-202ENST00000350501 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
GRHL3-202ENST00000350501 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
GRHL3-202ENST00000350501 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
GRHL3-202ENST00000350501 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
GRHL3-202ENST00000350501 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
GRHL3-202ENST00000350501 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
GRHL3-202ENST00000350501 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
GRHL3-202ENST00000350501 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
GRHL3-202ENST00000350501 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
GRHL3-202ENST00000350501 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
GRHL3-202ENST00000350501 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
GRHL3-202ENST00000350501 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
GRHL3-202ENST00000350501 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
GRHL3-202ENST00000350501 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
GRHL3-202ENST00000350501 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
GRHL3-202ENST00000350501 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
GRHL3-202ENST00000350501 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
GRHL3-202ENST00000350501 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
GRHL3-202ENST00000350501 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
GRHL3-202ENST00000350501 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
GRHL3-202ENST00000350501 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
GRHL3-202ENST00000350501 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
GRHL3-202ENST00000350501 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
GRHL3-202ENST00000350501 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.87
GRHL3-202ENST00000350501 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
GRHL3-202ENST00000350501 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
GRHL3-202ENST00000350501 WIZO95785 1651 aa20.38■□□□□ 0.85
GRHL3-202ENST00000350501 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
GRHL3-202ENST00000350501 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
GRHL3-202ENST00000350501 CUX2O14529 1486 aa20.33■□□□□ 0.84
GRHL3-202ENST00000350501 NESP48681 1621 aa20.28■□□□□ 0.84
GRHL3-202ENST00000350501 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
GRHL3-202ENST00000350501 PCGF6Q9BYE7 350 aa20.25■□□□□ 0.83
GRHL3-202ENST00000350501 FAM9AQ8IZU1 332 aaPredicted RBP20.15■□□□□ 0.82
GRHL3-202ENST00000350501 HRCP23327 699 aa20.12■□□□□ 0.81
GRHL3-202ENST00000350501 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
GRHL3-202ENST00000350501 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
GRHL3-202ENST00000350501 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
GRHL3-202ENST00000350501 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.8
GRHL3-202ENST00000350501 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.8
GRHL3-202ENST00000350501 DNAJC5Q9H3Z4 198 aa20.05■□□□□ 0.8
GRHL3-202ENST00000350501 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
GRHL3-202ENST00000350501 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
GRHL3-202ENST00000350501 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
GRHL3-202ENST00000350501 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
GRHL3-202ENST00000350501 CFTRP13569 1480 aa19.92■□□□□ 0.78
GRHL3-202ENST00000350501 WDR62O43379 1518 aa19.89■□□□□ 0.77
GRHL3-202ENST00000350501 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
GRHL3-202ENST00000350501 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
GRHL3-202ENST00000350501 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
GRHL3-202ENST00000350501 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
GRHL3-202ENST00000350501 PPARGC1BQ86YN6 1023 aaKnown RBP19.72■□□□□ 0.75
GRHL3-202ENST00000350501 URB2Q14146 1524 aaKnown RBP19.67■□□□□ 0.74
GRHL3-202ENST00000350501 SOGA1O94964 1423 aa19.64■□□□□ 0.74
GRHL3-202ENST00000350501 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
GRHL3-202ENST00000350501 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
GRHL3-202ENST00000350501 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
GRHL3-202ENST00000350501 EEA1Q15075 1411 aa19.52■□□□□ 0.72
GRHL3-202ENST00000350501 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
GRHL3-202ENST00000350501 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
GRHL3-202ENST00000350501 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
GRHL3-202ENST00000350501 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
GRHL3-202ENST00000350501 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
GRHL3-202ENST00000350501 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
GRHL3-202ENST00000350501 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
GRHL3-202ENST00000350501 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
GRHL3-202ENST00000350501 ZNF608Q9ULD9 1512 aaPredicted RBP19.37■□□□□ 0.69
GRHL3-202ENST00000350501 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
GRHL3-202ENST00000350501 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
GRHL3-202ENST00000350501 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
GRHL3-202ENST00000350501 EIF4G3O43432 1585 aaKnown RBP19.33■□□□□ 0.68
GRHL3-202ENST00000350501 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
GRHL3-202ENST00000350501 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
GRHL3-202ENST00000350501 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
GRHL3-202ENST00000350501 KIF21BO75037 1637 aa19.25■□□□□ 0.67
GRHL3-202ENST00000350501 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
GRHL3-202ENST00000350501 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.67
GRHL3-202ENST00000350501 CUX1P39880 1505 aa19.21■□□□□ 0.67
GRHL3-202ENST00000350501 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
GRHL3-202ENST00000350501 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
GRHL3-202ENST00000350501 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
GRHL3-202ENST00000350501 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
GRHL3-202ENST00000350501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
GRHL3-202ENST00000350501 CHD1O14646 1710 aa19.15■□□□□ 0.66
GRHL3-202ENST00000350501 CLIP1P30622 1438 aa19.13■□□□□ 0.65
GRHL3-202ENST00000350501 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
GRHL3-202ENST00000350501 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
GRHL3-202ENST00000350501 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
GRHL3-202ENST00000350501 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
GRHL3-202ENST00000350501 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
GRHL3-202ENST00000350501 ARHGEF11O15085 1522 aa19.07■□□□□ 0.64
GRHL3-202ENST00000350501 MAGI1Q96QZ7 1491 aaPredicted RBP19.06■□□□□ 0.64
GRHL3-202ENST00000350501 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
GRHL3-202ENST00000350501 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
GRHL3-202ENST00000350501 SNAPC4Q5SXM2 1469 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms