RNA–Protein interactions for RNA: ENST00000340273.4

MMP13-202, Transcript of matrix metallopeptidase 13, humanhuman

TSL 1 (best) BASIC

Gene MMP13, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13-202ENST00000340273 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
MMP13-202ENST00000340273 NISCHQ9Y2I1 1504 aa18.61■□□□□ 0.57
MMP13-202ENST00000340273 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
MMP13-202ENST00000340273 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
MMP13-202ENST00000340273 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
MMP13-202ENST00000340273 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
MMP13-202ENST00000340273 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
MMP13-202ENST00000340273 ABCC9O60706 1549 aa15.94■□□□□ 0.14
MMP13-202ENST00000340273 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
MMP13-202ENST00000340273 FOXD1Q16676 465 aa15.59■□□□□ 0.09
MMP13-202ENST00000340273 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
MMP13-202ENST00000340273 NACADO15069 1562 aa15.32■□□□□ 0.04
MMP13-202ENST00000340273 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
MMP13-202ENST00000340273 DCAF1Q9Y4B6 1507 aa15.28■□□□□ 0.04
MMP13-202ENST00000340273 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.02
MMP13-202ENST00000340273 MYO15BQ96JP2 1530 aa15.2■□□□□ 0.02
MMP13-202ENST00000340273 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
MMP13-202ENST00000340273 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
MMP13-202ENST00000340273 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
MMP13-202ENST00000340273 MSH5O43196 834 aa14.8□□□□□ -0.04
MMP13-202ENST00000340273 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
MMP13-202ENST00000340273 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
MMP13-202ENST00000340273 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
MMP13-202ENST00000340273 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
MMP13-202ENST00000340273 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
MMP13-202ENST00000340273 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
MMP13-202ENST00000340273 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
MMP13-202ENST00000340273 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
MMP13-202ENST00000340273 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
MMP13-202ENST00000340273 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
MMP13-202ENST00000340273 CC2D2AQ9P2K1 1620 aa14.31□□□□□ -0.12
MMP13-202ENST00000340273 WIZO95785 1651 aa14.27□□□□□ -0.13
MMP13-202ENST00000340273 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
MMP13-202ENST00000340273 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
MMP13-202ENST00000340273 BAZ1BQ9UIG0 1483 aaKnown RBP14.2□□□□□ -0.14
MMP13-202ENST00000340273 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
MMP13-202ENST00000340273 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
MMP13-202ENST00000340273 TOP2AP11388 1531 aaKnown RBP14.07□□□□□ -0.16
MMP13-202ENST00000340273 HMGXB3Q12766 1538 aa14.06□□□□□ -0.16
MMP13-202ENST00000340273 HRCP23327 699 aa13.99□□□□□ -0.17
MMP13-202ENST00000340273 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
MMP13-202ENST00000340273 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
MMP13-202ENST00000340273 LOC105371045A0A1W2PR82 267 aa13.91□□□□□ -0.18
MMP13-202ENST00000340273 PCGF6Q9BYE7 350 aa13.87□□□□□ -0.19
MMP13-202ENST00000340273 NESP48681 1621 aa13.84□□□□□ -0.19
MMP13-202ENST00000340273 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.19
MMP13-202ENST00000340273 ADRA2BP18089 450 aa13.83□□□□□ -0.2
MMP13-202ENST00000340273 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
MMP13-202ENST00000340273 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
MMP13-202ENST00000340273 CFTRP13569 1480 aa13.74□□□□□ -0.21
MMP13-202ENST00000340273 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
MMP13-202ENST00000340273 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
MMP13-202ENST00000340273 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
MMP13-202ENST00000340273 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
MMP13-202ENST00000340273 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
MMP13-202ENST00000340273 PPARGC1BQ86YN6 1023 aaKnown RBP13.6□□□□□ -0.23
MMP13-202ENST00000340273 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
MMP13-202ENST00000340273 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
MMP13-202ENST00000340273 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
MMP13-202ENST00000340273 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
MMP13-202ENST00000340273 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
MMP13-202ENST00000340273 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
MMP13-202ENST00000340273 URB2Q14146 1524 aaKnown RBP13.5□□□□□ -0.25
MMP13-202ENST00000340273 CUX1P39880 1505 aa13.48□□□□□ -0.25
MMP13-202ENST00000340273 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
MMP13-202ENST00000340273 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
MMP13-202ENST00000340273 DNMBPQ6XZF7 1577 aa13.45□□□□□ -0.26
MMP13-202ENST00000340273 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
MMP13-202ENST00000340273 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
MMP13-202ENST00000340273 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
MMP13-202ENST00000340273 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
MMP13-202ENST00000340273 SOGA1O94964 1423 aa13.41□□□□□ -0.26
MMP13-202ENST00000340273 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
MMP13-202ENST00000340273 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
MMP13-202ENST00000340273 EEA1Q15075 1411 aa13.4□□□□□ -0.27
MMP13-202ENST00000340273 WDR62O43379 1518 aa13.39□□□□□ -0.27
MMP13-202ENST00000340273 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
MMP13-202ENST00000340273 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
MMP13-202ENST00000340273 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
MMP13-202ENST00000340273 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
MMP13-202ENST00000340273 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
MMP13-202ENST00000340273 CUX2O14529 1486 aa13.32□□□□□ -0.28
MMP13-202ENST00000340273 TNIKQ9UKE5 1360 aa13.32□□□□□ -0.28
MMP13-202ENST00000340273 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
MMP13-202ENST00000340273 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
MMP13-202ENST00000340273 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
MMP13-202ENST00000340273 KIF21BO75037 1637 aa13.3□□□□□ -0.28
MMP13-202ENST00000340273 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
MMP13-202ENST00000340273 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
MMP13-202ENST00000340273 FBLN2P98095 1184 aa13.28□□□□□ -0.28
MMP13-202ENST00000340273 ZNF608Q9ULD9 1512 aaPredicted RBP13.27□□□□□ -0.29
MMP13-202ENST00000340273 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
MMP13-202ENST00000340273 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
MMP13-202ENST00000340273 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
MMP13-202ENST00000340273 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
MMP13-202ENST00000340273 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
MMP13-202ENST00000340273 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
MMP13-202ENST00000340273 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
MMP13-202ENST00000340273 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
MMP13-202ENST00000340273 IGF1RP08069 1367 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms