RNA–Protein interactions for RNA: ENST00000335119.3

CCIN-201, Transcript of calicin, humanhuman

APPRIS P1 BASIC

Gene CCIN, Length 1,941 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCIN-201ENST00000335119 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
CCIN-201ENST00000335119 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
CCIN-201ENST00000335119 ABCC9O60706 1549 aa21.52■■□□□ 1.04
CCIN-201ENST00000335119 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
CCIN-201ENST00000335119 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
CCIN-201ENST00000335119 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
CCIN-201ENST00000335119 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
CCIN-201ENST00000335119 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
CCIN-201ENST00000335119 NACADO15069 1562 aa20.32■□□□□ 0.84
CCIN-201ENST00000335119 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
CCIN-201ENST00000335119 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
CCIN-201ENST00000335119 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCIN-201ENST00000335119 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
CCIN-201ENST00000335119 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
CCIN-201ENST00000335119 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
CCIN-201ENST00000335119 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
CCIN-201ENST00000335119 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
CCIN-201ENST00000335119 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
CCIN-201ENST00000335119 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
CCIN-201ENST00000335119 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
CCIN-201ENST00000335119 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
CCIN-201ENST00000335119 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
CCIN-201ENST00000335119 WIZO95785 1651 aa19.13■□□□□ 0.65
CCIN-201ENST00000335119 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
CCIN-201ENST00000335119 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.63
CCIN-201ENST00000335119 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
CCIN-201ENST00000335119 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
CCIN-201ENST00000335119 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
CCIN-201ENST00000335119 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
CCIN-201ENST00000335119 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
CCIN-201ENST00000335119 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
CCIN-201ENST00000335119 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
CCIN-201ENST00000335119 HMGXB3Q12766 1538 aa18.62■□□□□ 0.57
CCIN-201ENST00000335119 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
CCIN-201ENST00000335119 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
CCIN-201ENST00000335119 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
CCIN-201ENST00000335119 CUX2O14529 1486 aa18.52■□□□□ 0.55
CCIN-201ENST00000335119 NESP48681 1621 aa18.5■□□□□ 0.55
CCIN-201ENST00000335119 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
CCIN-201ENST00000335119 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
CCIN-201ENST00000335119 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
CCIN-201ENST00000335119 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
CCIN-201ENST00000335119 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
CCIN-201ENST00000335119 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
CCIN-201ENST00000335119 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
CCIN-201ENST00000335119 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
CCIN-201ENST00000335119 CFTRP13569 1480 aa18.21■□□□□ 0.51
CCIN-201ENST00000335119 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
CCIN-201ENST00000335119 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
CCIN-201ENST00000335119 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
CCIN-201ENST00000335119 SOGA1O94964 1423 aa18.12■□□□□ 0.49
CCIN-201ENST00000335119 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.48
CCIN-201ENST00000335119 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
CCIN-201ENST00000335119 RUSC2Q8N2Y8 1516 aa18.05■□□□□ 0.48
CCIN-201ENST00000335119 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
CCIN-201ENST00000335119 WDR62O43379 1518 aa18.04■□□□□ 0.48
CCIN-201ENST00000335119 EEA1Q15075 1411 aa18.01■□□□□ 0.47
CCIN-201ENST00000335119 CUX1P39880 1505 aa18.01■□□□□ 0.47
CCIN-201ENST00000335119 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
CCIN-201ENST00000335119 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
CCIN-201ENST00000335119 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
CCIN-201ENST00000335119 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
CCIN-201ENST00000335119 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
CCIN-201ENST00000335119 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
CCIN-201ENST00000335119 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
CCIN-201ENST00000335119 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
CCIN-201ENST00000335119 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
CCIN-201ENST00000335119 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
CCIN-201ENST00000335119 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
CCIN-201ENST00000335119 KIF21BO75037 1637 aa17.76■□□□□ 0.43
CCIN-201ENST00000335119 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
CCIN-201ENST00000335119 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
CCIN-201ENST00000335119 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
CCIN-201ENST00000335119 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
CCIN-201ENST00000335119 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
CCIN-201ENST00000335119 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
CCIN-201ENST00000335119 PRXQ9BXM0 1461 aa17.67■□□□□ 0.42
CCIN-201ENST00000335119 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
CCIN-201ENST00000335119 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
CCIN-201ENST00000335119 PCGF6Q9BYE7 350 aa17.64■□□□□ 0.41
CCIN-201ENST00000335119 IGF1RP08069 1367 aa17.63■□□□□ 0.41
CCIN-201ENST00000335119 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
CCIN-201ENST00000335119 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
CCIN-201ENST00000335119 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
CCIN-201ENST00000335119 CLIP1P30622 1438 aa17.55■□□□□ 0.4
CCIN-201ENST00000335119 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
CCIN-201ENST00000335119 CARMIL1Q5VZK9 1371 aa17.55■□□□□ 0.4
CCIN-201ENST00000335119 PPARGC1BQ86YN6 1023 aaKnown RBP17.54■□□□□ 0.4
CCIN-201ENST00000335119 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
CCIN-201ENST00000335119 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
CCIN-201ENST00000335119 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
CCIN-201ENST00000335119 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
CCIN-201ENST00000335119 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCIN-201ENST00000335119 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
CCIN-201ENST00000335119 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
CCIN-201ENST00000335119 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
CCIN-201ENST00000335119 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
CCIN-201ENST00000335119 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
CCIN-201ENST00000335119 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
CCIN-201ENST00000335119 CUL7Q14999 1698 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms