RNA–Protein interactions for RNA: ENST00000316334.4

LNX2-201, Transcript of ligand of numb-protein X 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LNX2, Length 4,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNX2-201ENST00000316334 NISCHQ9Y2I1 1504 aa12.98□□□□□ -0.33
LNX2-201ENST00000316334 CCDC180Q9P1Z9 1646 aa11.53□□□□□ -0.56
LNX2-201ENST00000316334 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
LNX2-201ENST00000316334 ZCCHC6Q5VYS8 1495 aaKnown RBP10.92□□□□□ -0.66
LNX2-201ENST00000316334 DCAF1Q9Y4B6 1507 aa10.86□□□□□ -0.67
LNX2-201ENST00000316334 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
LNX2-201ENST00000316334 ABCC9O60706 1549 aa10.76□□□□□ -0.69
LNX2-201ENST00000316334 NACADO15069 1562 aa10.67□□□□□ -0.7
LNX2-201ENST00000316334 UNC13AQ9UPW8 1703 aa10.6□□□□□ -0.71
LNX2-201ENST00000316334 RB1CC1Q8TDY2 1594 aa10.57□□□□□ -0.72
LNX2-201ENST00000316334 BICRAQ9NZM4 1560 aa10.44□□□□□ -0.74
LNX2-201ENST00000316334 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
LNX2-201ENST00000316334 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
LNX2-201ENST00000316334 SCRIBQ14160 1630 aa10.38□□□□□ -0.75
LNX2-201ENST00000316334 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
LNX2-201ENST00000316334 HRCP23327 699 aa10.14□□□□□ -0.79
LNX2-201ENST00000316334 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
LNX2-201ENST00000316334 CECR2Q9BXF3 1484 aa10.06□□□□□ -0.8
LNX2-201ENST00000316334 PEG3Q9GZU2 1588 aa10.06□□□□□ -0.8
LNX2-201ENST00000316334 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
LNX2-201ENST00000316334 EIF4G1Q04637 1599 aaKnown RBP10.01□□□□□ -0.81
LNX2-201ENST00000316334 MROH2BQ7Z745 1585 aa10.01□□□□□ -0.81
LNX2-201ENST00000316334 PABPN1Q86U42 306 aaKnown RBP eCLIP10□□□□□ -0.81
LNX2-201ENST00000316334 BAZ1AQ9NRL2 1556 aaPredicted RBP9.99□□□□□ -0.81
LNX2-201ENST00000316334 RSF1Q96T23 1441 aaPredicted RBP9.95□□□□□ -0.82
LNX2-201ENST00000316334 WIZO95785 1651 aa9.93□□□□□ -0.82
LNX2-201ENST00000316334 FAM9AQ8IZU1 332 aaPredicted RBP9.92□□□□□ -0.82
LNX2-201ENST00000316334 CC2D2AQ9P2K1 1620 aa9.9□□□□□ -0.82
LNX2-201ENST00000316334 CHIC1Q5VXU3 224 aa9.88□□□□□ -0.83
LNX2-201ENST00000316334 ATAD2BQ9ULI0 1458 aa9.87□□□□□ -0.83
LNX2-201ENST00000316334 HMGXB3Q12766 1538 aa9.86□□□□□ -0.83
LNX2-201ENST00000316334 NCAPD3P42695 1498 aa9.85□□□□□ -0.83
LNX2-201ENST00000316334 TRIM41Q8WV44 630 aa9.84□□□□□ -0.83
LNX2-201ENST00000316334 EHMT2Q96KQ7 1210 aa9.83□□□□□ -0.84
LNX2-201ENST00000316334 SMARCA2P51531 1590 aa9.83□□□□□ -0.84
LNX2-201ENST00000316334 TOP2AP11388 1531 aaKnown RBP9.82□□□□□ -0.84
LNX2-201ENST00000316334 LOC105371045A0A1W2PR82 267 aa9.82□□□□□ -0.84
LNX2-201ENST00000316334 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
LNX2-201ENST00000316334 DNAJC5BQ9UF47 199 aa9.75□□□□□ -0.85
LNX2-201ENST00000316334 APLP2Q06481 763 aa9.75□□□□□ -0.85
LNX2-201ENST00000316334 TRIM26Q12899 539 aaPredicted RBP9.7□□□□□ -0.86
LNX2-201ENST00000316334 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
LNX2-201ENST00000316334 PRDM2Q13029 1718 aa9.68□□□□□ -0.86
LNX2-201ENST00000316334 CCDC88BA6NC98 1476 aa9.67□□□□□ -0.86
LNX2-201ENST00000316334 ZEB1P37275 1124 aaPredicted RBP9.63□□□□□ -0.87
LNX2-201ENST00000316334 SCAF1Q9H7N4 1312 aaKnown RBP9.59□□□□□ -0.87
LNX2-201ENST00000316334 CFTRP13569 1480 aa9.57□□□□□ -0.88
LNX2-201ENST00000316334 TTBK1Q5TCY1 1321 aaPredicted RBP9.56□□□□□ -0.88
LNX2-201ENST00000316334 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
LNX2-201ENST00000316334 LAMC3Q9Y6N6 1575 aa9.54□□□□□ -0.88
LNX2-201ENST00000316334 CCER1Q8TC90 406 aaPredicted RBP9.51□□□□□ -0.89
LNX2-201ENST00000316334 KIF21AQ7Z4S6 1674 aa9.49□□□□□ -0.89
LNX2-201ENST00000316334 NESP48681 1621 aa9.49□□□□□ -0.89
LNX2-201ENST00000316334 CENPBP07199 599 aaPredicted RBP9.49□□□□□ -0.89
LNX2-201ENST00000316334 CADPSQ9ULU8 1353 aa9.47□□□□□ -0.89
LNX2-201ENST00000316334 YTHDC1Q96MU7 727 aaKnown RBP9.47□□□□□ -0.89
LNX2-201ENST00000316334 EEA1Q15075 1411 aa9.46□□□□□ -0.9
LNX2-201ENST00000316334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.46□□□□□ -0.9
LNX2-201ENST00000316334 GTF3C3Q9Y5Q9 886 aa9.45□□□□□ -0.9
LNX2-201ENST00000316334 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
LNX2-201ENST00000316334 BIVM-ERCC5R4GMW8 1640 aa9.44□□□□□ -0.9
LNX2-201ENST00000316334 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
LNX2-201ENST00000316334 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
LNX2-201ENST00000316334 MYT1Q01538 1121 aa9.4□□□□□ -0.91
LNX2-201ENST00000316334 SYNJ1O43426 1573 aa9.4□□□□□ -0.91
LNX2-201ENST00000316334 CUX1P39880 1505 aa9.39□□□□□ -0.91
LNX2-201ENST00000316334 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
LNX2-201ENST00000316334 WDR97A6NE52 1622 aa9.38□□□□□ -0.91
LNX2-201ENST00000316334 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
LNX2-201ENST00000316334 DIEXFQ68CQ4 756 aaKnown RBP9.37□□□□□ -0.91
LNX2-201ENST00000316334 WDR62O43379 1518 aa9.37□□□□□ -0.91
LNX2-201ENST00000316334 FANCD2Q9BXW9 1451 aa9.37□□□□□ -0.91
LNX2-201ENST00000316334 URB2Q14146 1524 aaKnown RBP9.36□□□□□ -0.91
LNX2-201ENST00000316334 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
LNX2-201ENST00000316334 DNMBPQ6XZF7 1577 aa9.34□□□□□ -0.91
LNX2-201ENST00000316334 WRNQ14191 1432 aaPredicted RBP eCLIP9.33□□□□□ -0.92
LNX2-201ENST00000316334 PDS5BQ9NTI5 1447 aa9.33□□□□□ -0.92
LNX2-201ENST00000316334 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
LNX2-201ENST00000316334 TOPBP1Q92547 1522 aa9.3□□□□□ -0.92
LNX2-201ENST00000316334 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
LNX2-201ENST00000316334 ATP1B4Q9UN42 357 aaPredicted RBP9.3□□□□□ -0.92
LNX2-201ENST00000316334 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
LNX2-201ENST00000316334 CUX2O14529 1486 aa9.27□□□□□ -0.93
LNX2-201ENST00000316334 KIF27Q86VH2 1401 aa9.26□□□□□ -0.93
LNX2-201ENST00000316334 RANGAP1P46060 587 aaPredicted RBP9.26□□□□□ -0.93
LNX2-201ENST00000316334 ABCA5Q8WWZ7 1642 aa9.24□□□□□ -0.93
LNX2-201ENST00000316334 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
LNX2-201ENST00000316334 ERCC6Q03468 1493 aa9.24□□□□□ -0.93
LNX2-201ENST00000316334 FGD5Q6ZNL6 1462 aa9.22□□□□□ -0.93
LNX2-201ENST00000316334 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
LNX2-201ENST00000316334 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.94
LNX2-201ENST00000316334 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
LNX2-201ENST00000316334 HNRNPUL2Q1KMD3 747 aaKnown RBP9.18□□□□□ -0.94
LNX2-201ENST00000316334 PBRM1Q86U86 1689 aa9.17□□□□□ -0.94
LNX2-201ENST00000316334 RAD54L2Q9Y4B4 1467 aa9.15□□□□□ -0.94
LNX2-201ENST00000316334 RUSC2Q8N2Y8 1516 aa9.15□□□□□ -0.94
LNX2-201ENST00000316334 EIF4G3O43432 1585 aaKnown RBP9.15□□□□□ -0.95
LNX2-201ENST00000316334 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
LNX2-201ENST00000316334 IFT140Q96RY7 1462 aa9.13□□□□□ -0.95
LNX2-201ENST00000316334 FBLN2P98095 1184 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms