RNA–Protein interactions for RNA: ENST00000312377.9

RACGAP1-201, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-201ENST00000312377 NISCHQ9Y2I1 1504 aa21.66■■□□□ 1.06
RACGAP1-201ENST00000312377 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
RACGAP1-201ENST00000312377 ABCC9O60706 1549 aa18.98■□□□□ 0.63
RACGAP1-201ENST00000312377 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
RACGAP1-201ENST00000312377 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.55
RACGAP1-201ENST00000312377 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
RACGAP1-201ENST00000312377 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
RACGAP1-201ENST00000312377 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
RACGAP1-201ENST00000312377 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
RACGAP1-201ENST00000312377 NACADO15069 1562 aa17.66■□□□□ 0.42
RACGAP1-201ENST00000312377 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
RACGAP1-201ENST00000312377 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
RACGAP1-201ENST00000312377 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
RACGAP1-201ENST00000312377 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
RACGAP1-201ENST00000312377 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
RACGAP1-201ENST00000312377 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
RACGAP1-201ENST00000312377 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
RACGAP1-201ENST00000312377 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
RACGAP1-201ENST00000312377 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
RACGAP1-201ENST00000312377 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
RACGAP1-201ENST00000312377 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
RACGAP1-201ENST00000312377 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
RACGAP1-201ENST00000312377 WIZO95785 1651 aa16.72■□□□□ 0.27
RACGAP1-201ENST00000312377 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
RACGAP1-201ENST00000312377 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
RACGAP1-201ENST00000312377 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
RACGAP1-201ENST00000312377 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
RACGAP1-201ENST00000312377 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
RACGAP1-201ENST00000312377 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
RACGAP1-201ENST00000312377 NESP48681 1621 aa16.44■□□□□ 0.22
RACGAP1-201ENST00000312377 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
RACGAP1-201ENST00000312377 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
RACGAP1-201ENST00000312377 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
RACGAP1-201ENST00000312377 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
RACGAP1-201ENST00000312377 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
RACGAP1-201ENST00000312377 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
RACGAP1-201ENST00000312377 RANGAP1P46060 587 aaPredicted RBP16.23■□□□□ 0.19
RACGAP1-201ENST00000312377 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
RACGAP1-201ENST00000312377 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
RACGAP1-201ENST00000312377 FBLN2P98095 1184 aa16.15■□□□□ 0.18
RACGAP1-201ENST00000312377 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
RACGAP1-201ENST00000312377 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
RACGAP1-201ENST00000312377 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.17
RACGAP1-201ENST00000312377 FANCD2Q9BXW9 1451 aa16.08■□□□□ 0.17
RACGAP1-201ENST00000312377 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
RACGAP1-201ENST00000312377 CFTRP13569 1480 aa16.01■□□□□ 0.15
RACGAP1-201ENST00000312377 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
RACGAP1-201ENST00000312377 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
RACGAP1-201ENST00000312377 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.14
RACGAP1-201ENST00000312377 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.14
RACGAP1-201ENST00000312377 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
RACGAP1-201ENST00000312377 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
RACGAP1-201ENST00000312377 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
RACGAP1-201ENST00000312377 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
RACGAP1-201ENST00000312377 SOGA1O94964 1423 aa15.83■□□□□ 0.12
RACGAP1-201ENST00000312377 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
RACGAP1-201ENST00000312377 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■■■□ 20
RACGAP1-201ENST00000312377 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
RACGAP1-201ENST00000312377 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.12
RACGAP1-201ENST00000312377 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
RACGAP1-201ENST00000312377 CUX1P39880 1505 aa15.76■□□□□ 0.11
RACGAP1-201ENST00000312377 RUSC2Q8N2Y8 1516 aa15.76■□□□□ 0.11
RACGAP1-201ENST00000312377 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
RACGAP1-201ENST00000312377 CUX2O14529 1486 aa15.76■□□□□ 0.11
RACGAP1-201ENST00000312377 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
RACGAP1-201ENST00000312377 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
RACGAP1-201ENST00000312377 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
RACGAP1-201ENST00000312377 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
RACGAP1-201ENST00000312377 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
RACGAP1-201ENST00000312377 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.1
RACGAP1-201ENST00000312377 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
RACGAP1-201ENST00000312377 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
RACGAP1-201ENST00000312377 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.09
RACGAP1-201ENST00000312377 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
RACGAP1-201ENST00000312377 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
RACGAP1-201ENST00000312377 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
RACGAP1-201ENST00000312377 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
RACGAP1-201ENST00000312377 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
RACGAP1-201ENST00000312377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
RACGAP1-201ENST00000312377 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
RACGAP1-201ENST00000312377 IGF1RP08069 1367 aa15.5■□□□□ 0.07
RACGAP1-201ENST00000312377 WDR62O43379 1518 aa15.5■□□□□ 0.07
RACGAP1-201ENST00000312377 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
RACGAP1-201ENST00000312377 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
RACGAP1-201ENST00000312377 SNAPC4Q5SXM2 1469 aa15.45■□□□□ 0.06
RACGAP1-201ENST00000312377 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
RACGAP1-201ENST00000312377 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
RACGAP1-201ENST00000312377 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
RACGAP1-201ENST00000312377 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
RACGAP1-201ENST00000312377 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
RACGAP1-201ENST00000312377 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
RACGAP1-201ENST00000312377 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
RACGAP1-201ENST00000312377 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
RACGAP1-201ENST00000312377 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
RACGAP1-201ENST00000312377 APLP2Q06481 763 aa15.27■□□□□ 0.03
RACGAP1-201ENST00000312377 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
RACGAP1-201ENST00000312377 KCNH8Q96L42 1107 aa15.23■□□□□ 0.03
RACGAP1-201ENST00000312377 GOLGA3Q08378 1498 aa15.21■□□□□ 0.03
RACGAP1-201ENST00000312377 EEA1Q15075 1411 aa15.21■□□□□ 0.03
RACGAP1-201ENST00000312377 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms