RNA–Protein interactions for RNA: ENST00000299355.10

ACAT1-202, Transcript of acetyl-CoA acetyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene ACAT1, Length 1,345 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAT1-202ENST00000299355 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.34
ACAT1-202ENST00000299355 CHIC1Q5VXU3 224 aa28.96■■■□□ 2.23
ACAT1-202ENST00000299355 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
ACAT1-202ENST00000299355 PHF23Q9BUL5 403 aaPredicted RBP25.43■■□□□ 1.66
ACAT1-202ENST00000299355 SENP3Q9H4L4 574 aaPredicted RBP25.25■■□□□ 1.63
ACAT1-202ENST00000299355 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
ACAT1-202ENST00000299355 ABCC9O60706 1549 aa24.34■■□□□ 1.49
ACAT1-202ENST00000299355 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
ACAT1-202ENST00000299355 FOXD1Q16676 465 aa23.39■■□□□ 1.34
ACAT1-202ENST00000299355 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
ACAT1-202ENST00000299355 NACADO15069 1562 aa23.13■■□□□ 1.29
ACAT1-202ENST00000299355 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
ACAT1-202ENST00000299355 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
ACAT1-202ENST00000299355 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
ACAT1-202ENST00000299355 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
ACAT1-202ENST00000299355 ZCCHC6Q5VYS8 1495 aaKnown RBP22.65■■□□□ 1.22
ACAT1-202ENST00000299355 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
ACAT1-202ENST00000299355 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
ACAT1-202ENST00000299355 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
ACAT1-202ENST00000299355 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
ACAT1-202ENST00000299355 ADRA2BP18089 450 aa22.38■■□□□ 1.17
ACAT1-202ENST00000299355 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
ACAT1-202ENST00000299355 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
ACAT1-202ENST00000299355 PIAS4Q8N2W9 510 aaPredicted RBP22.05■■□□□ 1.12
ACAT1-202ENST00000299355 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
ACAT1-202ENST00000299355 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
ACAT1-202ENST00000299355 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
ACAT1-202ENST00000299355 MSH5O43196 834 aa21.65■■□□□ 1.06
ACAT1-202ENST00000299355 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
ACAT1-202ENST00000299355 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
ACAT1-202ENST00000299355 SMARCA4P51532 1647 aa21.27■■□□□ 1
ACAT1-202ENST00000299355 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
ACAT1-202ENST00000299355 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
ACAT1-202ENST00000299355 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
ACAT1-202ENST00000299355 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
ACAT1-202ENST00000299355 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
ACAT1-202ENST00000299355 CUX2O14529 1486 aa21.04■□□□□ 0.96
ACAT1-202ENST00000299355 ERCC6Q03468 1493 aa21■□□□□ 0.95
ACAT1-202ENST00000299355 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
ACAT1-202ENST00000299355 NESP48681 1621 aa20.94■□□□□ 0.94
ACAT1-202ENST00000299355 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
ACAT1-202ENST00000299355 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
ACAT1-202ENST00000299355 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
ACAT1-202ENST00000299355 WIZO95785 1651 aa20.72■□□□□ 0.91
ACAT1-202ENST00000299355 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
ACAT1-202ENST00000299355 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
ACAT1-202ENST00000299355 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
ACAT1-202ENST00000299355 PPP4R3CPQ6ZMV5 832 aa20.64■□□□□ 0.89
ACAT1-202ENST00000299355 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
ACAT1-202ENST00000299355 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
ACAT1-202ENST00000299355 WDR62O43379 1518 aa20.52■□□□□ 0.88
ACAT1-202ENST00000299355 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.87
ACAT1-202ENST00000299355 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
ACAT1-202ENST00000299355 CFTRP13569 1480 aa20.48■□□□□ 0.87
ACAT1-202ENST00000299355 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
ACAT1-202ENST00000299355 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
ACAT1-202ENST00000299355 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
ACAT1-202ENST00000299355 URB2Q14146 1524 aaKnown RBP20.27■□□□□ 0.84
ACAT1-202ENST00000299355 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
ACAT1-202ENST00000299355 CCDC88BA6NC98 1476 aa20.25■□□□□ 0.83
ACAT1-202ENST00000299355 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
ACAT1-202ENST00000299355 CNKSR2Q8WXI2 1034 aa20.11■□□□□ 0.81
ACAT1-202ENST00000299355 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
ACAT1-202ENST00000299355 KCNA4P22459 653 aa20.08■□□□□ 0.81
ACAT1-202ENST00000299355 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
ACAT1-202ENST00000299355 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
ACAT1-202ENST00000299355 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
ACAT1-202ENST00000299355 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
ACAT1-202ENST00000299355 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
ACAT1-202ENST00000299355 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
ACAT1-202ENST00000299355 EIF4G3O43432 1585 aaKnown RBP19.91■□□□□ 0.78
ACAT1-202ENST00000299355 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
ACAT1-202ENST00000299355 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
ACAT1-202ENST00000299355 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
ACAT1-202ENST00000299355 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
ACAT1-202ENST00000299355 POTEDQ86YR6 584 aa19.8■□□□□ 0.76
ACAT1-202ENST00000299355 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
ACAT1-202ENST00000299355 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
ACAT1-202ENST00000299355 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
ACAT1-202ENST00000299355 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
ACAT1-202ENST00000299355 RNF216Q9NWF9 866 aaPredicted RBP19.76■□□□□ 0.75
ACAT1-202ENST00000299355 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
ACAT1-202ENST00000299355 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
ACAT1-202ENST00000299355 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
ACAT1-202ENST00000299355 CUX1P39880 1505 aa19.73■□□□□ 0.75
ACAT1-202ENST00000299355 SOGA1O94964 1423 aa19.72■□□□□ 0.75
ACAT1-202ENST00000299355 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
ACAT1-202ENST00000299355 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
ACAT1-202ENST00000299355 CHD1O14646 1710 aa19.72■□□□□ 0.75
ACAT1-202ENST00000299355 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
ACAT1-202ENST00000299355 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
ACAT1-202ENST00000299355 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
ACAT1-202ENST00000299355 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
ACAT1-202ENST00000299355 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
ACAT1-202ENST00000299355 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
ACAT1-202ENST00000299355 FBLN2P98095 1184 aa19.55■□□□□ 0.72
ACAT1-202ENST00000299355 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
ACAT1-202ENST00000299355 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
ACAT1-202ENST00000299355 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
ACAT1-202ENST00000299355 ABCA5Q8WWZ7 1642 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms