RNA–Protein interactions for RNA: ENST00000298919.7

PDZRN4-201, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 2 BASIC

Gene PDZRN4, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-201ENST00000298919 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.18
PDZRN4-201ENST00000298919 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
PDZRN4-201ENST00000298919 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
PDZRN4-201ENST00000298919 ZCCHC6Q5VYS8 1495 aaKnown RBP11.75□□□□□ -0.53
PDZRN4-201ENST00000298919 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
PDZRN4-201ENST00000298919 CHIC1Q5VXU3 224 aa11.47□□□□□ -0.57
PDZRN4-201ENST00000298919 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
PDZRN4-201ENST00000298919 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
PDZRN4-201ENST00000298919 DCAF1Q9Y4B6 1507 aa11.39□□□□□ -0.59
PDZRN4-201ENST00000298919 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
PDZRN4-201ENST00000298919 SCRIBQ14160 1630 aa11.1□□□□□ -0.63
PDZRN4-201ENST00000298919 ABCC9O60706 1549 aa11.07□□□□□ -0.64
PDZRN4-201ENST00000298919 RSF1Q96T23 1441 aaPredicted RBP10.98□□□□□ -0.65
PDZRN4-201ENST00000298919 NACADO15069 1562 aa10.93□□□□□ -0.66
PDZRN4-201ENST00000298919 CECR2Q9BXF3 1484 aa10.9□□□□□ -0.66
PDZRN4-201ENST00000298919 RB1CC1Q8TDY2 1594 aa10.88□□□□□ -0.67
PDZRN4-201ENST00000298919 LOC105371045A0A1W2PR82 267 aa10.85□□□□□ -0.67
PDZRN4-201ENST00000298919 MROH2BQ7Z745 1585 aa10.84□□□□□ -0.67
PDZRN4-201ENST00000298919 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
PDZRN4-201ENST00000298919 WIZO95785 1651 aa10.79□□□□□ -0.68
PDZRN4-201ENST00000298919 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
PDZRN4-201ENST00000298919 PCGF6Q9BYE7 350 aa10.67□□□□□ -0.7
PDZRN4-201ENST00000298919 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
PDZRN4-201ENST00000298919 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
PDZRN4-201ENST00000298919 TRIM41Q8WV44 630 aa10.63□□□□□ -0.71
PDZRN4-201ENST00000298919 HRCP23327 699 aa10.62□□□□□ -0.71
PDZRN4-201ENST00000298919 SMARCA4P51532 1647 aa10.61□□□□□ -0.71
PDZRN4-201ENST00000298919 BICRAQ9NZM4 1560 aa10.61□□□□□ -0.71
PDZRN4-201ENST00000298919 FAM9AQ8IZU1 332 aaPredicted RBP10.57□□□□□ -0.72
PDZRN4-201ENST00000298919 TOP2AP11388 1531 aaKnown RBP10.55□□□□□ -0.72
PDZRN4-201ENST00000298919 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
PDZRN4-201ENST00000298919 SMARCA2P51531 1590 aa10.54□□□□□ -0.72
PDZRN4-201ENST00000298919 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
PDZRN4-201ENST00000298919 ABCC8Q09428 1581 aa10.51□□□□□ -0.73
PDZRN4-201ENST00000298919 PPARGC1BQ86YN6 1023 aaKnown RBP10.51□□□□□ -0.73
PDZRN4-201ENST00000298919 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
PDZRN4-201ENST00000298919 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
PDZRN4-201ENST00000298919 PEG3Q9GZU2 1588 aa10.43□□□□□ -0.74
PDZRN4-201ENST00000298919 SOGA1O94964 1423 aa10.38□□□□□ -0.75
PDZRN4-201ENST00000298919 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
PDZRN4-201ENST00000298919 ATAD2BQ9ULI0 1458 aa10.35□□□□□ -0.75
PDZRN4-201ENST00000298919 SYNJ1O43426 1573 aa10.3□□□□□ -0.76
PDZRN4-201ENST00000298919 BAZ1BQ9UIG0 1483 aaKnown RBP10.26□□□□□ -0.77
PDZRN4-201ENST00000298919 WRNQ14191 1432 aaPredicted RBP eCLIP10.25□□□□□ -0.77
PDZRN4-201ENST00000298919 PHF23Q9BUL5 403 aaPredicted RBP10.23□□□□□ -0.77
PDZRN4-201ENST00000298919 CEP162Q5TB80 1403 aa10.23□□□□□ -0.77
PDZRN4-201ENST00000298919 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
PDZRN4-201ENST00000298919 TNIKQ9UKE5 1360 aa10.2□□□□□ -0.78
PDZRN4-201ENST00000298919 EEA1Q15075 1411 aa10.17□□□□□ -0.78
PDZRN4-201ENST00000298919 NCAPD3P42695 1498 aa10.14□□□□□ -0.79
PDZRN4-201ENST00000298919 TOP2BQ02880 1626 aa10.14□□□□□ -0.79
PDZRN4-201ENST00000298919 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
PDZRN4-201ENST00000298919 KIF21BO75037 1637 aa10.13□□□□□ -0.79
PDZRN4-201ENST00000298919 HMGXB3Q12766 1538 aa10.13□□□□□ -0.79
PDZRN4-201ENST00000298919 TTBK1Q5TCY1 1321 aaPredicted RBP10.13□□□□□ -0.79
PDZRN4-201ENST00000298919 BIVM-ERCC5R4GMW8 1640 aa10.12□□□□□ -0.79
PDZRN4-201ENST00000298919 RAPGEF2Q9Y4G8 1499 aa10.12□□□□□ -0.79
PDZRN4-201ENST00000298919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.11□□□□□ -0.79
PDZRN4-201ENST00000298919 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
PDZRN4-201ENST00000298919 CUX1P39880 1505 aa10.09□□□□□ -0.79
PDZRN4-201ENST00000298919 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
PDZRN4-201ENST00000298919 ZEB1P37275 1124 aaPredicted RBP10.07□□□□□ -0.8
PDZRN4-201ENST00000298919 CFTRP13569 1480 aa10.05□□□□□ -0.8
PDZRN4-201ENST00000298919 CLIP1P30622 1438 aa10.03□□□□□ -0.8
PDZRN4-201ENST00000298919 PRXQ9BXM0 1461 aa10.02□□□□□ -0.81
PDZRN4-201ENST00000298919 PRDM2Q13029 1718 aa9.99□□□□□ -0.81
PDZRN4-201ENST00000298919 VPS8Q8N3P4 1428 aa9.99□□□□□ -0.81
PDZRN4-201ENST00000298919 CCER1Q8TC90 406 aaPredicted RBP9.97□□□□□ -0.81
PDZRN4-201ENST00000298919 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
PDZRN4-201ENST00000298919 ERICH3Q5RHP9 1530 aa9.97□□□□□ -0.81
PDZRN4-201ENST00000298919 ARAP1Q96P48 1450 aa9.97□□□□□ -0.81
PDZRN4-201ENST00000298919 CC2D2AQ9P2K1 1620 aa9.96□□□□□ -0.82
PDZRN4-201ENST00000298919 CADPSQ9ULU8 1353 aa9.92□□□□□ -0.82
PDZRN4-201ENST00000298919 KIF27Q86VH2 1401 aa9.9□□□□□ -0.82
PDZRN4-201ENST00000298919 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
PDZRN4-201ENST00000298919 IGF1RP08069 1367 aa9.89□□□□□ -0.83
PDZRN4-201ENST00000298919 HNRNPUL2Q1KMD3 747 aaKnown RBP9.88□□□□□ -0.83
PDZRN4-201ENST00000298919 ARHGAP35Q9NRY4 1499 aa9.88□□□□□ -0.83
PDZRN4-201ENST00000298919 FGD5Q6ZNL6 1462 aa9.88□□□□□ -0.83
PDZRN4-201ENST00000298919 NESP48681 1621 aa9.86□□□□□ -0.83
PDZRN4-201ENST00000298919 CUX2O14529 1486 aa9.86□□□□□ -0.83
PDZRN4-201ENST00000298919 DNAJC5BQ9UF47 199 aa9.86□□□□□ -0.83
PDZRN4-201ENST00000298919 FANCD2Q9BXW9 1451 aa9.83□□□□□ -0.84
PDZRN4-201ENST00000298919 RAD54L2Q9Y4B4 1467 aa9.82□□□□□ -0.84
PDZRN4-201ENST00000298919 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
PDZRN4-201ENST00000298919 CARMIL1Q5VZK9 1371 aa9.79□□□□□ -0.84
PDZRN4-201ENST00000298919 SCAF1Q9H7N4 1312 aaKnown RBP9.78□□□□□ -0.84
PDZRN4-201ENST00000298919 POLA1P09884 1462 aaPredicted RBP9.78□□□□□ -0.84
PDZRN4-201ENST00000298919 TOPBP1Q92547 1522 aa9.78□□□□□ -0.84
PDZRN4-201ENST00000298919 DNMBPQ6XZF7 1577 aa9.78□□□□□ -0.84
PDZRN4-201ENST00000298919 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
PDZRN4-201ENST00000298919 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
PDZRN4-201ENST00000298919 DIEXFQ68CQ4 756 aaKnown RBP9.76□□□□□ -0.85
PDZRN4-201ENST00000298919 URB2Q14146 1524 aaKnown RBP9.76□□□□□ -0.85
PDZRN4-201ENST00000298919 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
PDZRN4-201ENST00000298919 APLP2Q06481 763 aa9.76□□□□□ -0.85
PDZRN4-201ENST00000298919 WDR97A6NE52 1622 aa9.75□□□□□ -0.85
PDZRN4-201ENST00000298919 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
PDZRN4-201ENST00000298919 TIAM1Q13009 1591 aa9.73□□□□□ -0.85
PDZRN4-201ENST00000298919 DAXXQ9UER7 740 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms