RNA–Protein interactions for RNA: ENST00000260257.8

FDXACB1-201, Transcript of ferredoxin-fold anticodon binding domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDXACB1, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDXACB1-201ENST00000260257 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
FDXACB1-201ENST00000260257 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
FDXACB1-201ENST00000260257 ABCC9O60706 1549 aa22.56■■□□□ 1.2
FDXACB1-201ENST00000260257 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
FDXACB1-201ENST00000260257 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
FDXACB1-201ENST00000260257 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
FDXACB1-201ENST00000260257 NACADO15069 1562 aa21.7■■□□□ 1.06
FDXACB1-201ENST00000260257 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
FDXACB1-201ENST00000260257 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
FDXACB1-201ENST00000260257 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
FDXACB1-201ENST00000260257 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
FDXACB1-201ENST00000260257 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
FDXACB1-201ENST00000260257 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
FDXACB1-201ENST00000260257 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
FDXACB1-201ENST00000260257 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
FDXACB1-201ENST00000260257 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
FDXACB1-201ENST00000260257 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
FDXACB1-201ENST00000260257 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
FDXACB1-201ENST00000260257 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
FDXACB1-201ENST00000260257 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.84
FDXACB1-201ENST00000260257 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
FDXACB1-201ENST00000260257 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
FDXACB1-201ENST00000260257 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
FDXACB1-201ENST00000260257 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
FDXACB1-201ENST00000260257 LOC105371045A0A1W2PR82 267 aa20■□□□□ 0.79
FDXACB1-201ENST00000260257 HRCP23327 699 aa19.98■□□□□ 0.79
FDXACB1-201ENST00000260257 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
FDXACB1-201ENST00000260257 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
FDXACB1-201ENST00000260257 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
FDXACB1-201ENST00000260257 WIZO95785 1651 aa19.94■□□□□ 0.78
FDXACB1-201ENST00000260257 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
FDXACB1-201ENST00000260257 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
FDXACB1-201ENST00000260257 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
FDXACB1-201ENST00000260257 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
FDXACB1-201ENST00000260257 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
FDXACB1-201ENST00000260257 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
FDXACB1-201ENST00000260257 PELP1Q8IZL8 1130 aaKnown RBP19.72■□□□□ 0.75
FDXACB1-201ENST00000260257 CCDC88BA6NC98 1476 aa19.57■□□□□ 0.72
FDXACB1-201ENST00000260257 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
FDXACB1-201ENST00000260257 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
FDXACB1-201ENST00000260257 NESP48681 1621 aa19.49■□□□□ 0.71
FDXACB1-201ENST00000260257 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
FDXACB1-201ENST00000260257 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
FDXACB1-201ENST00000260257 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
FDXACB1-201ENST00000260257 CUX2O14529 1486 aa19.39■□□□□ 0.69
FDXACB1-201ENST00000260257 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
FDXACB1-201ENST00000260257 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
FDXACB1-201ENST00000260257 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
FDXACB1-201ENST00000260257 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
FDXACB1-201ENST00000260257 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
FDXACB1-201ENST00000260257 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
FDXACB1-201ENST00000260257 CFTRP13569 1480 aa19.23■□□□□ 0.67
FDXACB1-201ENST00000260257 SOGA1O94964 1423 aa19.21■□□□□ 0.67
FDXACB1-201ENST00000260257 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
FDXACB1-201ENST00000260257 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
FDXACB1-201ENST00000260257 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
FDXACB1-201ENST00000260257 WDR62O43379 1518 aa19.14■□□□□ 0.65
FDXACB1-201ENST00000260257 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
FDXACB1-201ENST00000260257 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
FDXACB1-201ENST00000260257 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
FDXACB1-201ENST00000260257 MYT1Q01538 1121 aa19.07■□□□□ 0.64
FDXACB1-201ENST00000260257 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
FDXACB1-201ENST00000260257 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
FDXACB1-201ENST00000260257 CSRNP3Q8WYN3 585 aa19.04■□□□□ 0.64
FDXACB1-201ENST00000260257 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
FDXACB1-201ENST00000260257 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
FDXACB1-201ENST00000260257 SYNJ1O43426 1573 aa18.97■□□□□ 0.63
FDXACB1-201ENST00000260257 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
FDXACB1-201ENST00000260257 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
FDXACB1-201ENST00000260257 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
FDXACB1-201ENST00000260257 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
FDXACB1-201ENST00000260257 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
FDXACB1-201ENST00000260257 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
FDXACB1-201ENST00000260257 IFT140Q96RY7 1462 aa18.75■□□□□ 0.59
FDXACB1-201ENST00000260257 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
FDXACB1-201ENST00000260257 CUX1P39880 1505 aa18.72■□□□□ 0.59
FDXACB1-201ENST00000260257 EEA1Q15075 1411 aa18.7■□□□□ 0.58
FDXACB1-201ENST00000260257 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
FDXACB1-201ENST00000260257 TARBP1Q13395 1621 aaKnown RBP18.7■□□□□ 0.58
FDXACB1-201ENST00000260257 GOLGA3Q08378 1498 aa18.67■□□□□ 0.58
FDXACB1-201ENST00000260257 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
FDXACB1-201ENST00000260257 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
FDXACB1-201ENST00000260257 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
FDXACB1-201ENST00000260257 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
FDXACB1-201ENST00000260257 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
FDXACB1-201ENST00000260257 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
FDXACB1-201ENST00000260257 CLIP1P30622 1438 aa18.55■□□□□ 0.56
FDXACB1-201ENST00000260257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
FDXACB1-201ENST00000260257 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
FDXACB1-201ENST00000260257 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
FDXACB1-201ENST00000260257 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
FDXACB1-201ENST00000260257 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.55
FDXACB1-201ENST00000260257 CHD1O14646 1710 aa18.48■□□□□ 0.55
FDXACB1-201ENST00000260257 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
FDXACB1-201ENST00000260257 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
FDXACB1-201ENST00000260257 IGF1RP08069 1367 aa18.45■□□□□ 0.54
FDXACB1-201ENST00000260257 KIF21BO75037 1637 aa18.45■□□□□ 0.54
FDXACB1-201ENST00000260257 P3H3Q8IVL6 736 aa18.44■□□□□ 0.54
FDXACB1-201ENST00000260257 PRXQ9BXM0 1461 aa18.44■□□□□ 0.54
FDXACB1-201ENST00000260257 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms