RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 NISCHQ9Y2I1 1504 aa9.37□□□□□ -0.91
RTTN-201ENST00000255674 MYO15BQ96JP2 1530 aa9.11□□□□□ -0.95
RTTN-201ENST00000255674 DCAF1Q9Y4B6 1507 aa8.93□□□□□ -0.98
RTTN-201ENST00000255674 SHROOM4Q9ULL8 1493 aa8.46□□□□□ -1.05
RTTN-201ENST00000255674 CCDC180Q9P1Z9 1646 aa8.4□□□□□ -1.06
RTTN-201ENST00000255674 ZCCHC6Q5VYS8 1495 aaKnown RBP8.16□□□□□ -1.1
RTTN-201ENST00000255674 PEG3Q9GZU2 1588 aa7.88□□□□□ -1.15
RTTN-201ENST00000255674 BAZ1BQ9UIG0 1483 aaKnown RBP7.7□□□□□ -1.18
RTTN-201ENST00000255674 NACADO15069 1562 aa7.69□□□□□ -1.18
RTTN-201ENST00000255674 EIF4G1Q04637 1599 aaKnown RBP7.5□□□□□ -1.21
RTTN-201ENST00000255674 ABCC9O60706 1549 aa7.39□□□□□ -1.23
RTTN-201ENST00000255674 NCAPD3P42695 1498 aa7.39□□□□□ -1.23
RTTN-201ENST00000255674 HMGXB3Q12766 1538 aa7.35□□□□□ -1.23
RTTN-201ENST00000255674 BICRAQ9NZM4 1560 aa7.32□□□□□ -1.24
RTTN-201ENST00000255674 BAZ1AQ9NRL2 1556 aaPredicted RBP7.2□□□□□ -1.26
RTTN-201ENST00000255674 SMARCA2P51531 1590 aa7.18□□□□□ -1.26
RTTN-201ENST00000255674 RSF1Q96T23 1441 aaPredicted RBP7.15□□□□□ -1.27
RTTN-201ENST00000255674 RB1CC1Q8TDY2 1594 aa7.12□□□□□ -1.27
RTTN-201ENST00000255674 WDR97A6NE52 1622 aa7.09□□□□□ -1.27
RTTN-201ENST00000255674 EEA1Q15075 1411 aa7.09□□□□□ -1.28
RTTN-201ENST00000255674 WRNQ14191 1432 aaPredicted RBP eCLIP7.02□□□□□ -1.29
RTTN-201ENST00000255674 CFTRP13569 1480 aa7.01□□□□□ -1.29
RTTN-201ENST00000255674 MAP3K1Q13233 1512 aa6.99□□□□□ -1.29
RTTN-201ENST00000255674 TOP2AP11388 1531 aaKnown RBP6.97□□□□□ -1.29
RTTN-201ENST00000255674 ATAD2BQ9ULI0 1458 aa6.95□□□□□ -1.3
RTTN-201ENST00000255674 PRXQ9BXM0 1461 aa6.9□□□□□ -1.31
RTTN-201ENST00000255674 CUX2O14529 1486 aa6.87□□□□□ -1.31
RTTN-201ENST00000255674 SMARCA4P51532 1647 aa6.84□□□□□ -1.31
RTTN-201ENST00000255674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.84□□□□□ -1.32
RTTN-201ENST00000255674 ERICH3Q5RHP9 1530 aa6.82□□□□□ -1.32
RTTN-201ENST00000255674 MROH2BQ7Z745 1585 aa6.81□□□□□ -1.32
RTTN-201ENST00000255674 AKNAQ7Z591 1439 aa6.78□□□□□ -1.32
RTTN-201ENST00000255674 AQRO60306 1485 aaKnown RBP eCLIP6.74□□□□□ -1.335e-8■■■■■ 34.8
RTTN-201ENST00000255674 CECR2Q9BXF3 1484 aa6.74□□□□□ -1.33
RTTN-201ENST00000255674 ABCC8Q09428 1581 aa6.73□□□□□ -1.33
RTTN-201ENST00000255674 KDM5BQ9UGL1 1544 aa6.72□□□□□ -1.33
RTTN-201ENST00000255674 ABCA10Q8WWZ4 1543 aa6.72□□□□□ -1.33
RTTN-201ENST00000255674 ARHGEF11O15085 1522 aa6.71□□□□□ -1.33
RTTN-201ENST00000255674 BIVM-ERCC5R4GMW8 1640 aa6.71□□□□□ -1.34
RTTN-201ENST00000255674 WDR62O43379 1518 aa6.67□□□□□ -1.34
RTTN-201ENST00000255674 IFT140Q96RY7 1462 aa6.67□□□□□ -1.34
RTTN-201ENST00000255674 ARAP3Q8WWN8 1544 aa6.64□□□□□ -1.35
RTTN-201ENST00000255674 TOP2BQ02880 1626 aa6.63□□□□□ -1.35
RTTN-201ENST00000255674 THOC2Q8NI27 1593 aaKnown RBP6.62□□□□□ -1.35
RTTN-201ENST00000255674 CADPSQ9ULU8 1353 aa6.61□□□□□ -1.35
RTTN-201ENST00000255674 KIF21BO75037 1637 aa6.61□□□□□ -1.35
RTTN-201ENST00000255674 LAMC3Q9Y6N6 1575 aa6.61□□□□□ -1.35
RTTN-201ENST00000255674 HRCP23327 699 aa6.6□□□□□ -1.35
RTTN-201ENST00000255674 PRAG1Q86YV5 1406 aa6.6□□□□□ -1.35
RTTN-201ENST00000255674 NEURL4Q96JN8 1562 aa6.6□□□□□ -1.35
RTTN-201ENST00000255674 ZNF608Q9ULD9 1512 aaPredicted RBP6.57□□□□□ -1.36
RTTN-201ENST00000255674 WDR7Q9Y4E6 1490 aa6.57□□□□□ -1.36
RTTN-201ENST00000255674 NUP160Q12769 1436 aa6.56□□□□□ -1.36
RTTN-201ENST00000255674 CCDC88BA6NC98 1476 aa6.55□□□□□ -1.36
RTTN-201ENST00000255674 ERCC6Q03468 1493 aa6.54□□□□□ -1.36
RTTN-201ENST00000255674 TNIKQ9UKE5 1360 aa6.53□□□□□ -1.36
RTTN-201ENST00000255674 FAM135AQ9P2D6 1515 aa6.53□□□□□ -1.36
RTTN-201ENST00000255674 RAPGEF2Q9Y4G8 1499 aa6.52□□□□□ -1.37
RTTN-201ENST00000255674 ATP10AO60312 1499 aa6.51□□□□□ -1.37
RTTN-201ENST00000255674 GOLGA3Q08378 1498 aa6.5□□□□□ -1.37
RTTN-201ENST00000255674 ABCA5Q8WWZ7 1642 aa6.48□□□□□ -1.37
RTTN-201ENST00000255674 CLSPNQ9HAW4 1339 aa6.46□□□□□ -1.37
RTTN-201ENST00000255674 EFCAB5A4FU69 1503 aa6.46□□□□□ -1.38
RTTN-201ENST00000255674 ACIN1Q9UKV3 1341 aaKnown RBP6.46□□□□□ -1.38
RTTN-201ENST00000255674 SAMD9Q5K651 1589 aa6.44□□□□□ -1.38
RTTN-201ENST00000255674 DNMBPQ6XZF7 1577 aa6.44□□□□□ -1.38
RTTN-201ENST00000255674 ZNF518AQ6AHZ1 1483 aa6.43□□□□□ -1.38
RTTN-201ENST00000255674 UGGT2Q9NYU1 1516 aa6.42□□□□□ -1.38
RTTN-201ENST00000255674 TARBP1Q13395 1621 aaKnown RBP6.42□□□□□ -1.38
RTTN-201ENST00000255674 MAGI2Q86UL8 1455 aa6.42□□□□□ -1.38
RTTN-201ENST00000255674 UHRF1BP1LA0JNW5 1464 aa6.41□□□□□ -1.38
RTTN-201ENST00000255674 GAPVD1Q14C86 1478 aa6.4□□□□□ -1.38
RTTN-201ENST00000255674 SHROOM2Q13796 1616 aa6.4□□□□□ -1.38
RTTN-201ENST00000255674 PTPRGP23470 1445 aa6.4□□□□□ -1.38
RTTN-201ENST00000255674 ZMYM4Q5VZL5 1548 aa6.39□□□□□ -1.39
RTTN-201ENST00000255674 CC2D2AQ9P2K1 1620 aa6.39□□□□□ -1.39
RTTN-201ENST00000255674 IQGAP2Q13576 1575 aa6.38□□□□□ -1.39
RTTN-201ENST00000255674 RRBP1Q9P2E9 1410 aaKnown RBP6.38□□□□□ -1.39
RTTN-201ENST00000255674 TCOF1Q13428 1488 aaKnown RBP6.37□□□□□ -1.39
RTTN-201ENST00000255674 IGF1RP08069 1367 aa6.37□□□□□ -1.39
RTTN-201ENST00000255674 UNC13AQ9UPW8 1703 aa6.36□□□□□ -1.39
RTTN-201ENST00000255674 RUSC2Q8N2Y8 1516 aa6.36□□□□□ -1.39
RTTN-201ENST00000255674 SNAPC4Q5SXM2 1469 aa6.36□□□□□ -1.39
RTTN-201ENST00000255674 CEP164Q9UPV0 1460 aa6.35□□□□□ -1.39
RTTN-201ENST00000255674 INSRP06213 1382 aa6.35□□□□□ -1.39
RTTN-201ENST00000255674 CHIC1Q5VXU3 224 aa6.35□□□□□ -1.39
RTTN-201ENST00000255674 SCRIBQ14160 1630 aa6.35□□□□□ -1.39
RTTN-201ENST00000255674 TEX14Q8IWB6 1497 aa6.34□□□□□ -1.4
RTTN-201ENST00000255674 NESP48681 1621 aa6.34□□□□□ -1.4
RTTN-201ENST00000255674 KDM5DQ9BY66 1539 aa6.33□□□□□ -1.4
RTTN-201ENST00000255674 KIAA0586Q9BVV6 1533 aa6.33□□□□□ -1.4
RTTN-201ENST00000255674 NCOA2Q15596 1464 aa6.33□□□□□ -1.4
RTTN-201ENST00000255674 SYNJ1O43426 1573 aa6.33□□□□□ -1.4
RTTN-201ENST00000255674 CUX1P39880 1505 aa6.32□□□□□ -1.4
RTTN-201ENST00000255674 MAGI1Q96QZ7 1491 aaPredicted RBP6.32□□□□□ -1.4
RTTN-201ENST00000255674 CCDC18Q5T9S5 1454 aa6.32□□□□□ -1.4
RTTN-201ENST00000255674 REREQ9P2R6 1566 aa6.31□□□□□ -1.4
RTTN-201ENST00000255674 ADGRL2O95490 1459 aa6.31□□□□□ -1.4
RTTN-201ENST00000255674 TOPBP1Q92547 1522 aa6.31□□□□□ -1.4
RTTN-201ENST00000255674 POLA1P09884 1462 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms