RNA–Protein interactions for RNA: ENST00000254271.8

LRRC9-201, Transcript of leucine rich repeat containing 9, humanhuman

TSL 2

Gene LRRC9, Length 4,915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-201ENST00000254271 NISCHQ9Y2I1 1504 aa7.3□□□□□ -1.24
LRRC9-201ENST00000254271 CCDC180Q9P1Z9 1646 aa6.84□□□□□ -1.31
LRRC9-201ENST00000254271 UNC13AQ9UPW8 1703 aa6.79□□□□□ -1.32
LRRC9-201ENST00000254271 BICRAQ9NZM4 1560 aa6.54□□□□□ -1.36
LRRC9-201ENST00000254271 MYO15BQ96JP2 1530 aa6.38□□□□□ -1.39
LRRC9-201ENST00000254271 DNAJC5BQ9UF47 199 aa6.31□□□□□ -1.4
LRRC9-201ENST00000254271 ABCC9O60706 1549 aa6.29□□□□□ -1.4
LRRC9-201ENST00000254271 DCAF1Q9Y4B6 1507 aa6.24□□□□□ -1.41
LRRC9-201ENST00000254271 NACADO15069 1562 aa6.2□□□□□ -1.42
LRRC9-201ENST00000254271 ZCCHC6Q5VYS8 1495 aaKnown RBP6.15□□□□□ -1.43
LRRC9-201ENST00000254271 RB1CC1Q8TDY2 1594 aa6.14□□□□□ -1.43
LRRC9-201ENST00000254271 SHROOM4Q9ULL8 1493 aa6.1□□□□□ -1.43
LRRC9-201ENST00000254271 CC2D2AQ9P2K1 1620 aa6.04□□□□□ -1.44
LRRC9-201ENST00000254271 EIF4G1Q04637 1599 aaKnown RBP6.03□□□□□ -1.44
LRRC9-201ENST00000254271 PEG3Q9GZU2 1588 aa6.01□□□□□ -1.45
LRRC9-201ENST00000254271 SCRIBQ14160 1630 aa5.96□□□□□ -1.46
LRRC9-201ENST00000254271 THOC2Q8NI27 1593 aaKnown RBP5.95□□□□□ -1.46
LRRC9-201ENST00000254271 AEBP2Q6ZN18 517 aaPredicted RBP5.94□□□□□ -1.46
LRRC9-201ENST00000254271 PRDM2Q13029 1718 aa5.85□□□□□ -1.47
LRRC9-201ENST00000254271 POTEDQ86YR6 584 aa5.84□□□□□ -1.47
LRRC9-201ENST00000254271 KIF21AQ7Z4S6 1674 aa5.83□□□□□ -1.48
LRRC9-201ENST00000254271 HMGXB3Q12766 1538 aa5.79□□□□□ -1.48
LRRC9-201ENST00000254271 SMARCA4P51532 1647 aa5.79□□□□□ -1.48
LRRC9-201ENST00000254271 NCAPD3P42695 1498 aa5.74□□□□□ -1.49
LRRC9-201ENST00000254271 CECR2Q9BXF3 1484 aa5.72□□□□□ -1.49
LRRC9-201ENST00000254271 WDR97A6NE52 1622 aa5.71□□□□□ -1.5
LRRC9-201ENST00000254271 ATAD2BQ9ULI0 1458 aa5.68□□□□□ -1.5
LRRC9-201ENST00000254271 WDR62O43379 1518 aa5.66□□□□□ -1.5
LRRC9-201ENST00000254271 MROH2BQ7Z745 1585 aa5.66□□□□□ -1.5
LRRC9-201ENST00000254271 SMARCA2P51531 1590 aa5.66□□□□□ -1.5
LRRC9-201ENST00000254271 WIZO95785 1651 aa5.64□□□□□ -1.51
LRRC9-201ENST00000254271 NESP48681 1621 aa5.64□□□□□ -1.51
LRRC9-201ENST00000254271 LAMC3Q9Y6N6 1575 aa5.62□□□□□ -1.51
LRRC9-201ENST00000254271 TARBP1Q13395 1621 aaKnown RBP5.62□□□□□ -1.51
LRRC9-201ENST00000254271 CUX2O14529 1486 aa5.62□□□□□ -1.51
LRRC9-201ENST00000254271 PABPN1Q86U42 306 aaKnown RBP eCLIP5.58□□□□□ -1.52
LRRC9-201ENST00000254271 BAZ1AQ9NRL2 1556 aaPredicted RBP5.55□□□□□ -1.52
LRRC9-201ENST00000254271 DNAJC5Q9H3Z4 198 aa5.54□□□□□ -1.52
LRRC9-201ENST00000254271 URB2Q14146 1524 aaKnown RBP5.51□□□□□ -1.53
LRRC9-201ENST00000254271 KIF13AQ9H1H9 1805 aa5.51□□□□□ -1.53
LRRC9-201ENST00000254271 CHD1O14646 1710 aa5.51□□□□□ -1.53
LRRC9-201ENST00000254271 CLASP1Q7Z460 1538 aa5.49□□□□□ -1.53
LRRC9-201ENST00000254271 SHROOM2Q13796 1616 aa5.48□□□□□ -1.53
LRRC9-201ENST00000254271 CFTRP13569 1480 aa5.48□□□□□ -1.53
LRRC9-201ENST00000254271 RIMBP3CA6NJZ7 1639 aa5.47□□□□□ -1.53
LRRC9-201ENST00000254271 RIMBP3BA6NNM3 1639 aa5.47□□□□□ -1.53
LRRC9-201ENST00000254271 RIMBP3Q9UFD9 1639 aa5.47□□□□□ -1.53
LRRC9-201ENST00000254271 PPRC1Q5VV67 1664 aaKnown RBP5.45□□□□□ -1.54
LRRC9-201ENST00000254271 ABCA5Q8WWZ7 1642 aa5.45□□□□□ -1.54
LRRC9-201ENST00000254271 EIF4G3O43432 1585 aaKnown RBP5.44□□□□□ -1.54
LRRC9-201ENST00000254271 TOP2AP11388 1531 aaKnown RBP5.44□□□□□ -1.54
LRRC9-201ENST00000254271 PBRM1Q86U86 1689 aa5.41□□□□□ -1.54
LRRC9-201ENST00000254271 BIVM-ERCC5R4GMW8 1640 aa5.38□□□□□ -1.55
LRRC9-201ENST00000254271 RSF1Q96T23 1441 aaPredicted RBP5.38□□□□□ -1.55
LRRC9-201ENST00000254271 ZNF608Q9ULD9 1512 aaPredicted RBP5.37□□□□□ -1.55
LRRC9-201ENST00000254271 ERCC6L2Q5T890 1561 aa5.36□□□□□ -1.55
LRRC9-201ENST00000254271 SIGLEC1Q9BZZ2 1709 aa5.34□□□□□ -1.55
LRRC9-201ENST00000254271 MRC2Q9UBG0 1479 aa5.34□□□□□ -1.56
LRRC9-201ENST00000254271 BAZ1BQ9UIG0 1483 aaKnown RBP5.33□□□□□ -1.56
LRRC9-201ENST00000254271 SRCAPQ6ZRS2 3230 aa5.32□□□□□ -1.56
LRRC9-201ENST00000254271 CUX1P39880 1505 aa5.32□□□□□ -1.56
LRRC9-201ENST00000254271 ARAP1Q96P48 1450 aa5.32□□□□□ -1.56
LRRC9-201ENST00000254271 DNMBPQ6XZF7 1577 aa5.32□□□□□ -1.56
LRRC9-201ENST00000254271 TOPBP1Q92547 1522 aa5.31□□□□□ -1.56
LRRC9-201ENST00000254271 ARHGEF11O15085 1522 aa5.31□□□□□ -1.56
LRRC9-201ENST00000254271 CCDC88BA6NC98 1476 aa5.3□□□□□ -1.56
LRRC9-201ENST00000254271 CADPSQ9ULU8 1353 aa5.3□□□□□ -1.56
LRRC9-201ENST00000254271 CEP170Q5SW79 1584 aa5.28□□□□□ -1.56
LRRC9-201ENST00000254271 TOP2BQ02880 1626 aa5.27□□□□□ -1.57
LRRC9-201ENST00000254271 FANCD2Q9BXW9 1451 aa5.27□□□□□ -1.57
LRRC9-201ENST00000254271 POLA1P09884 1462 aaPredicted RBP5.25□□□□□ -1.57
LRRC9-201ENST00000254271 SYNJ1O43426 1573 aa5.25□□□□□ -1.57
LRRC9-201ENST00000254271 RUSC2Q8N2Y8 1516 aa5.25□□□□□ -1.57
LRRC9-201ENST00000254271 LRRIQ1Q96JM4 1722 aa5.24□□□□□ -1.57
LRRC9-201ENST00000254271 ADAMTS12P58397 1594 aa5.24□□□□□ -1.57
LRRC9-201ENST00000254271 ADCY10Q96PN6 1610 aa5.23□□□□□ -1.57
LRRC9-201ENST00000254271 CEP164Q9UPV0 1460 aa5.19□□□□□ -1.58
LRRC9-201ENST00000254271 ABCA10Q8WWZ4 1543 aa5.18□□□□□ -1.58
LRRC9-201ENST00000254271 NUP160Q12769 1436 aa5.18□□□□□ -1.58
LRRC9-201ENST00000254271 DIP2BQ9P265 1576 aa5.18□□□□□ -1.58
LRRC9-201ENST00000254271 MAP3K4Q9Y6R4 1608 aa5.18□□□□□ -1.58
LRRC9-201ENST00000254271 EP400Q96L91 3159 aa5.16□□□□□ -1.58
LRRC9-201ENST00000254271 CHIC1Q5VXU3 224 aa5.15□□□□□ -1.58
LRRC9-201ENST00000254271 IFT140Q96RY7 1462 aa5.15□□□□□ -1.58
LRRC9-201ENST00000254271 PDS5BQ9NTI5 1447 aa5.14□□□□□ -1.59
LRRC9-201ENST00000254271 UTRNP46939 3433 aa5.14□□□□□ -1.59
LRRC9-201ENST00000254271 FRMPD1Q5SYB0 1578 aa5.13□□□□□ -1.59
LRRC9-201ENST00000254271 KDM5BQ9UGL1 1544 aa5.13□□□□□ -1.59
LRRC9-201ENST00000254271 MAPKBP1O60336 1514 aa5.12□□□□□ -1.59
LRRC9-201ENST00000254271 RAD54L2Q9Y4B4 1467 aa5.12□□□□□ -1.59
LRRC9-201ENST00000254271 FGD5Q6ZNL6 1462 aa5.11□□□□□ -1.59
LRRC9-201ENST00000254271 MAGI1Q96QZ7 1491 aaPredicted RBP5.09□□□□□ -1.59
LRRC9-201ENST00000254271 ABCC2Q92887 1545 aa5.09□□□□□ -1.59
LRRC9-201ENST00000254271 ERICH3Q5RHP9 1530 aa5.09□□□□□ -1.6
LRRC9-201ENST00000254271 ERCC6Q03468 1493 aa5.08□□□□□ -1.6
LRRC9-201ENST00000254271 AQRO60306 1485 aaKnown RBP eCLIP5.08□□□□□ -1.6
LRRC9-201ENST00000254271 GLI2P10070 1586 aa5.08□□□□□ -1.6
LRRC9-201ENST00000254271 COL17A1Q9UMD9 1497 aaPredicted RBP5.07□□□□□ -1.6
LRRC9-201ENST00000254271 SNAPC4Q5SXM2 1469 aa5.06□□□□□ -1.6
LRRC9-201ENST00000254271 RICTORQ6R327 1708 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms