RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
MTRF1-201ENST00000239852 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
MTRF1-201ENST00000239852 NISCHQ9Y2I1 1504 aa17.27■□□□□ 0.35
MTRF1-201ENST00000239852 ABCC9O60706 1549 aa17.26■□□□□ 0.35
MTRF1-201ENST00000239852 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.31
MTRF1-201ENST00000239852 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
MTRF1-201ENST00000239852 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
MTRF1-201ENST00000239852 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
MTRF1-201ENST00000239852 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
MTRF1-201ENST00000239852 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
MTRF1-201ENST00000239852 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
MTRF1-201ENST00000239852 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
MTRF1-201ENST00000239852 TRIM41Q8WV44 630 aa15.58■□□□□ 0.09
MTRF1-201ENST00000239852 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
MTRF1-201ENST00000239852 NACADO15069 1562 aa15.51■□□□□ 0.07
MTRF1-201ENST00000239852 CUX2O14529 1486 aa15.47■□□□□ 0.07
MTRF1-201ENST00000239852 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
MTRF1-201ENST00000239852 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
MTRF1-201ENST00000239852 PHF23Q9BUL5 403 aaPredicted RBP15.38■□□□□ 0.05
MTRF1-201ENST00000239852 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
MTRF1-201ENST00000239852 EIF4G1Q04637 1599 aaKnown RBP15.2■□□□□ 0.02
MTRF1-201ENST00000239852 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
MTRF1-201ENST00000239852 ERCC6Q03468 1493 aa15.03■□□□□ -0
MTRF1-201ENST00000239852 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
MTRF1-201ENST00000239852 FOXD1Q16676 465 aa14.86□□□□□ -0.03
MTRF1-201ENST00000239852 ILDR1Q86SU0 546 aaPredicted RBP14.68□□□□□ -0.06
MTRF1-201ENST00000239852 SCRIBQ14160 1630 aa14.58□□□□□ -0.08
MTRF1-201ENST00000239852 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
MTRF1-201ENST00000239852 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
MTRF1-201ENST00000239852 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
MTRF1-201ENST00000239852 NESP48681 1621 aa14.45□□□□□ -0.1
MTRF1-201ENST00000239852 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
MTRF1-201ENST00000239852 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
MTRF1-201ENST00000239852 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
MTRF1-201ENST00000239852 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
MTRF1-201ENST00000239852 MSH5O43196 834 aa14.35□□□□□ -0.11
MTRF1-201ENST00000239852 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
MTRF1-201ENST00000239852 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
MTRF1-201ENST00000239852 ARHGEF11O15085 1522 aa14.29□□□□□ -0.12
MTRF1-201ENST00000239852 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
MTRF1-201ENST00000239852 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
MTRF1-201ENST00000239852 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
MTRF1-201ENST00000239852 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
MTRF1-201ENST00000239852 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
MTRF1-201ENST00000239852 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
MTRF1-201ENST00000239852 WDR62O43379 1518 aa14.11□□□□□ -0.15
MTRF1-201ENST00000239852 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
MTRF1-201ENST00000239852 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
MTRF1-201ENST00000239852 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
MTRF1-201ENST00000239852 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
MTRF1-201ENST00000239852 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
MTRF1-201ENST00000239852 LMTK3Q96Q04 1460 aa13.87□□□□□ -0.19
MTRF1-201ENST00000239852 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
MTRF1-201ENST00000239852 SOCS7O14512 581 aa13.85□□□□□ -0.19
MTRF1-201ENST00000239852 FBXO41Q8TF61 875 aa13.85□□□□□ -0.19
MTRF1-201ENST00000239852 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
MTRF1-201ENST00000239852 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.19
MTRF1-201ENST00000239852 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
MTRF1-201ENST00000239852 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
MTRF1-201ENST00000239852 ERCC6L2Q5T890 1561 aa13.77□□□□□ -0.21
MTRF1-201ENST00000239852 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
MTRF1-201ENST00000239852 MYT1Q01538 1121 aa13.68□□□□□ -0.22
MTRF1-201ENST00000239852 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
MTRF1-201ENST00000239852 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
MTRF1-201ENST00000239852 ILDR2Q71H61 639 aa13.64□□□□□ -0.23
MTRF1-201ENST00000239852 PEG3Q9GZU2 1588 aa13.64□□□□□ -0.23
MTRF1-201ENST00000239852 CHD1O14646 1710 aa13.62□□□□□ -0.23
MTRF1-201ENST00000239852 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
MTRF1-201ENST00000239852 HECW2Q9P2P5 1572 aa13.6□□□□□ -0.23
MTRF1-201ENST00000239852 IFT140Q96RY7 1462 aa13.58□□□□□ -0.24
MTRF1-201ENST00000239852 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
MTRF1-201ENST00000239852 FBLN2P98095 1184 aa13.54□□□□□ -0.24
MTRF1-201ENST00000239852 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
MTRF1-201ENST00000239852 DISP3Q9P2K9 1392 aa13.5□□□□□ -0.25
MTRF1-201ENST00000239852 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
MTRF1-201ENST00000239852 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
MTRF1-201ENST00000239852 SYNJ2O15056 1496 aa13.46□□□□□ -0.26
MTRF1-201ENST00000239852 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.26
MTRF1-201ENST00000239852 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
MTRF1-201ENST00000239852 CFTRP13569 1480 aa13.41□□□□□ -0.26
MTRF1-201ENST00000239852 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
MTRF1-201ENST00000239852 ADGRL1O94910 1474 aa13.38□□□□□ -0.27
MTRF1-201ENST00000239852 AQRO60306 1485 aaKnown RBP eCLIP13.37□□□□□ -0.27
MTRF1-201ENST00000239852 SYNJ1O43426 1573 aa13.36□□□□□ -0.27
MTRF1-201ENST00000239852 KDM6BO15054 1643 aa13.35□□□□□ -0.27
MTRF1-201ENST00000239852 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
MTRF1-201ENST00000239852 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
MTRF1-201ENST00000239852 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
MTRF1-201ENST00000239852 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
MTRF1-201ENST00000239852 ABCC10Q5T3U5 1492 aa13.24□□□□□ -0.29
MTRF1-201ENST00000239852 SPATA31D1Q6ZQQ2 1576 aa13.22□□□□□ -0.29
MTRF1-201ENST00000239852 TARBP1Q13395 1621 aaKnown RBP13.22□□□□□ -0.29
MTRF1-201ENST00000239852 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
MTRF1-201ENST00000239852 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
MTRF1-201ENST00000239852 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
MTRF1-201ENST00000239852 DIP2BQ9P265 1576 aa13.14□□□□□ -0.31
MTRF1-201ENST00000239852 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
MTRF1-201ENST00000239852 PRDM2Q13029 1718 aa13.11□□□□□ -0.31
MTRF1-201ENST00000239852 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
MTRF1-201ENST00000239852 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms