RNA–Protein interactions for RNA: ENST00000229812.7

STK38-201, Transcript of serine/threonine kinase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STK38, Length 3,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK38-201ENST00000229812 NISCHQ9Y2I1 1504 aa24.27■■□□□ 1.48
STK38-201ENST00000229812 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
STK38-201ENST00000229812 SHROOM4Q9ULL8 1493 aa20.82■□□□□ 0.92
STK38-201ENST00000229812 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
STK38-201ENST00000229812 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.84
STK38-201ENST00000229812 ABCC9O60706 1549 aa20.26■□□□□ 0.83
STK38-201ENST00000229812 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
STK38-201ENST00000229812 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
STK38-201ENST00000229812 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
STK38-201ENST00000229812 NACADO15069 1562 aa19.44■□□□□ 0.7
STK38-201ENST00000229812 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
STK38-201ENST00000229812 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
STK38-201ENST00000229812 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
STK38-201ENST00000229812 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
STK38-201ENST00000229812 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
STK38-201ENST00000229812 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
STK38-201ENST00000229812 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
STK38-201ENST00000229812 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
STK38-201ENST00000229812 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
STK38-201ENST00000229812 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
STK38-201ENST00000229812 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
STK38-201ENST00000229812 WIZO95785 1651 aa18.72■□□□□ 0.59
STK38-201ENST00000229812 BAZ1AQ9NRL2 1556 aaPredicted RBP18.71■□□□□ 0.59
STK38-201ENST00000229812 BICRAQ9NZM4 1560 aa18.66■□□□□ 0.58
STK38-201ENST00000229812 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
STK38-201ENST00000229812 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
STK38-201ENST00000229812 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
STK38-201ENST00000229812 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
STK38-201ENST00000229812 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
STK38-201ENST00000229812 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
STK38-201ENST00000229812 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
STK38-201ENST00000229812 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
STK38-201ENST00000229812 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
STK38-201ENST00000229812 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
STK38-201ENST00000229812 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
STK38-201ENST00000229812 PCGF6Q9BYE7 350 aa18.09■□□□□ 0.49
STK38-201ENST00000229812 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
STK38-201ENST00000229812 NCAPD3P42695 1498 aa18.05■□□□□ 0.48
STK38-201ENST00000229812 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
STK38-201ENST00000229812 WRNQ14191 1432 aaPredicted RBP eCLIP18.04■□□□□ 0.48
STK38-201ENST00000229812 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
STK38-201ENST00000229812 SOGA1O94964 1423 aa17.98■□□□□ 0.47
STK38-201ENST00000229812 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
STK38-201ENST00000229812 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
STK38-201ENST00000229812 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
STK38-201ENST00000229812 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
STK38-201ENST00000229812 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
STK38-201ENST00000229812 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.44
STK38-201ENST00000229812 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
STK38-201ENST00000229812 CFTRP13569 1480 aa17.74■□□□□ 0.43
STK38-201ENST00000229812 NESP48681 1621 aa17.74■□□□□ 0.43
STK38-201ENST00000229812 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
STK38-201ENST00000229812 EEA1Q15075 1411 aa17.66■□□□□ 0.42
STK38-201ENST00000229812 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
STK38-201ENST00000229812 APLP2Q06481 763 aa17.63■□□□□ 0.41
STK38-201ENST00000229812 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
STK38-201ENST00000229812 CUX1P39880 1505 aa17.6■□□□□ 0.41
STK38-201ENST00000229812 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
STK38-201ENST00000229812 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
STK38-201ENST00000229812 CUX2O14529 1486 aa17.57■□□□□ 0.4
STK38-201ENST00000229812 TNIKQ9UKE5 1360 aa17.56■□□□□ 0.4
STK38-201ENST00000229812 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
STK38-201ENST00000229812 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
STK38-201ENST00000229812 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
STK38-201ENST00000229812 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
STK38-201ENST00000229812 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
STK38-201ENST00000229812 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
STK38-201ENST00000229812 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
STK38-201ENST00000229812 CLIP1P30622 1438 aa17.48■□□□□ 0.39
STK38-201ENST00000229812 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
STK38-201ENST00000229812 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
STK38-201ENST00000229812 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
STK38-201ENST00000229812 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
STK38-201ENST00000229812 IGF1RP08069 1367 aa17.38■□□□□ 0.37
STK38-201ENST00000229812 HRCP23327 699 aa17.38■□□□□ 0.37
STK38-201ENST00000229812 BIVM-ERCC5R4GMW8 1640 aa17.37■□□□□ 0.37
STK38-201ENST00000229812 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
STK38-201ENST00000229812 FBLN2P98095 1184 aa17.35■□□□□ 0.37
STK38-201ENST00000229812 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
STK38-201ENST00000229812 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.37
STK38-201ENST00000229812 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
STK38-201ENST00000229812 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
STK38-201ENST00000229812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
STK38-201ENST00000229812 PRXQ9BXM0 1461 aa17.29■□□□□ 0.36
STK38-201ENST00000229812 KIF21BO75037 1637 aa17.28■□□□□ 0.36
STK38-201ENST00000229812 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
STK38-201ENST00000229812 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.35
STK38-201ENST00000229812 ITGAEP38570 1179 aa17.25■□□□□ 0.35
STK38-201ENST00000229812 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
STK38-201ENST00000229812 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
STK38-201ENST00000229812 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
STK38-201ENST00000229812 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
STK38-201ENST00000229812 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
STK38-201ENST00000229812 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
STK38-201ENST00000229812 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
STK38-201ENST00000229812 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
STK38-201ENST00000229812 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
STK38-201ENST00000229812 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
STK38-201ENST00000229812 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
STK38-201ENST00000229812 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms