RNA–Protein interactions for RNA: ENST00000228741.7

ELK3-201, Transcript of ELK3, ETS transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELK3, Length 4,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK3-201ENST00000228741 NISCHQ9Y2I1 1504 aa19.65■□□□□ 0.74
ELK3-201ENST00000228741 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
ELK3-201ENST00000228741 ABCC9O60706 1549 aa17.27■□□□□ 0.35
ELK3-201ENST00000228741 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
ELK3-201ENST00000228741 SHROOM4Q9ULL8 1493 aa16.56■□□□□ 0.24
ELK3-201ENST00000228741 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
ELK3-201ENST00000228741 ZCCHC6Q5VYS8 1495 aaKnown RBP16.31■□□□□ 0.2
ELK3-201ENST00000228741 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
ELK3-201ENST00000228741 NACADO15069 1562 aa16.18■□□□□ 0.18
ELK3-201ENST00000228741 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
ELK3-201ENST00000228741 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
ELK3-201ENST00000228741 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
ELK3-201ENST00000228741 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
ELK3-201ENST00000228741 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
ELK3-201ENST00000228741 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.12
ELK3-201ENST00000228741 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
ELK3-201ENST00000228741 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
ELK3-201ENST00000228741 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
ELK3-201ENST00000228741 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
ELK3-201ENST00000228741 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
ELK3-201ENST00000228741 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
ELK3-201ENST00000228741 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
ELK3-201ENST00000228741 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
ELK3-201ENST00000228741 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
ELK3-201ENST00000228741 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
ELK3-201ENST00000228741 WIZO95785 1651 aa15.13■□□□□ 0.01
ELK3-201ENST00000228741 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
ELK3-201ENST00000228741 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
ELK3-201ENST00000228741 NESP48681 1621 aa14.92□□□□□ -0.02
ELK3-201ENST00000228741 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
ELK3-201ENST00000228741 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
ELK3-201ENST00000228741 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
ELK3-201ENST00000228741 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
ELK3-201ENST00000228741 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
ELK3-201ENST00000228741 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
ELK3-201ENST00000228741 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
ELK3-201ENST00000228741 FAM9AQ8IZU1 332 aaPredicted RBP14.74□□□□□ -0.05
ELK3-201ENST00000228741 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
ELK3-201ENST00000228741 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
ELK3-201ENST00000228741 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
ELK3-201ENST00000228741 FBLN2P98095 1184 aa14.61□□□□□ -0.07
ELK3-201ENST00000228741 CFTRP13569 1480 aa14.55□□□□□ -0.08
ELK3-201ENST00000228741 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
ELK3-201ENST00000228741 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
ELK3-201ENST00000228741 RANGAP1P46060 587 aaPredicted RBP14.54□□□□□ -0.08
ELK3-201ENST00000228741 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
ELK3-201ENST00000228741 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
ELK3-201ENST00000228741 CHIC1Q5VXU3 224 aa14.47□□□□□ -0.09
ELK3-201ENST00000228741 TTBK1Q5TCY1 1321 aaPredicted RBP14.44□□□□□ -0.1
ELK3-201ENST00000228741 TDRD9Q8NDG6 1382 aaKnown RBP14.44□□□□□ -0.1
ELK3-201ENST00000228741 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
ELK3-201ENST00000228741 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
ELK3-201ENST00000228741 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
ELK3-201ENST00000228741 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
ELK3-201ENST00000228741 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
ELK3-201ENST00000228741 SOGA1O94964 1423 aa14.36□□□□□ -0.11
ELK3-201ENST00000228741 AQRO60306 1485 aaKnown RBP eCLIP14.33□□□□□ -0.12
ELK3-201ENST00000228741 TOPBP1Q92547 1522 aa14.32□□□□□ -0.12
ELK3-201ENST00000228741 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
ELK3-201ENST00000228741 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
ELK3-201ENST00000228741 CUX2O14529 1486 aa14.29□□□□□ -0.12
ELK3-201ENST00000228741 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
ELK3-201ENST00000228741 CUX1P39880 1505 aa14.28□□□□□ -0.12
ELK3-201ENST00000228741 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.13
ELK3-201ENST00000228741 WDR62O43379 1518 aa14.26□□□□□ -0.13
ELK3-201ENST00000228741 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
ELK3-201ENST00000228741 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
ELK3-201ENST00000228741 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
ELK3-201ENST00000228741 LOC105371045A0A1W2PR82 267 aa14.22□□□□□ -0.13
ELK3-201ENST00000228741 DNMBPQ6XZF7 1577 aa14.19□□□□□ -0.14
ELK3-201ENST00000228741 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
ELK3-201ENST00000228741 P3H3Q8IVL6 736 aa14.16□□□□□ -0.14
ELK3-201ENST00000228741 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
ELK3-201ENST00000228741 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
ELK3-201ENST00000228741 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
ELK3-201ENST00000228741 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
ELK3-201ENST00000228741 ARID3CA6NKF2 412 aa14.11□□□□□ -0.15
ELK3-201ENST00000228741 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
ELK3-201ENST00000228741 KIF27Q86VH2 1401 aa14.1□□□□□ -0.15
ELK3-201ENST00000228741 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
ELK3-201ENST00000228741 SNAPC4Q5SXM2 1469 aa14.04□□□□□ -0.16
ELK3-201ENST00000228741 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
ELK3-201ENST00000228741 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.16
ELK3-201ENST00000228741 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
ELK3-201ENST00000228741 IGF1RP08069 1367 aa14.01□□□□□ -0.17
ELK3-201ENST00000228741 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
ELK3-201ENST00000228741 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
ELK3-201ENST00000228741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
ELK3-201ENST00000228741 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
ELK3-201ENST00000228741 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
ELK3-201ENST00000228741 BIVM-ERCC5R4GMW8 1640 aa13.96□□□□□ -0.18
ELK3-201ENST00000228741 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
ELK3-201ENST00000228741 PPARGC1BQ86YN6 1023 aaKnown RBP13.9□□□□□ -0.18
ELK3-201ENST00000228741 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
ELK3-201ENST00000228741 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
ELK3-201ENST00000228741 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
ELK3-201ENST00000228741 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
ELK3-201ENST00000228741 SYNJ2O15056 1496 aa13.84□□□□□ -0.19
ELK3-201ENST00000228741 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
ELK3-201ENST00000228741 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms