RNA–Protein interactions for RNA: ENSMUST00000215295.1

Syne1-205, Transcript of Nesprin-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Syne1, Length 27,908 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-205ENSMUST00000215295 Rpgrip1Q9EPQ2 1331 aa7,38□□□□□ -1,23
Syne1-205ENSMUST00000215295 Myt1Q8CFC2 1127 aa7,14□□□□□ -1,27
Syne1-205ENSMUST00000215295 Las1lA2BE28 776 aaKnown RBP7,06□□□□□ -1,28
Syne1-205ENSMUST00000215295 Cngb1E1AZ71 1325 aa6,95□□□□□ -1,3
Syne1-205ENSMUST00000215295 Pelp1Q9DBD5 1123 aaKnown RBP6,75□□□□□ -1,33
Syne1-205ENSMUST00000215295 Amer1Q7TS75 1132 aa6,61□□□□□ -1,35
Syne1-205ENSMUST00000215295 CenpbP27790 599 aa6,6□□□□□ -1,35
Syne1-205ENSMUST00000215295 Rtl5Q5DTT4 599 aa6,48□□□□□ -1,37
Syne1-205ENSMUST00000215295 DiexfQ8BTT6 772 aaKnown RBP6,42□□□□□ -1,38
Syne1-205ENSMUST00000215295 Wdr66E9Q743 1299 aa6,39□□□□□ -1,39
Syne1-205ENSMUST00000215295 Rhox8Q6VSS7 320 aa6,37□□□□□ -1,39
Syne1-205ENSMUST00000215295 Ccdc9Q8VC31 543 aaKnown RBP6,34□□□□□ -1,39
Syne1-205ENSMUST00000215295 Acin1Q9JIX8 1338 aaKnown RBP6,31□□□□□ -1,4
Syne1-205ENSMUST00000215295 Stra8P70278 393 aa6,28□□□□□ -1,4
Syne1-205ENSMUST00000215295 NefmP08553 848 aa6,28□□□□□ -1,4
Syne1-205ENSMUST00000215295 Tnnt3Q9QZ47 272 aa6,27□□□□□ -1,41
Syne1-205ENSMUST00000215295 4930567H17RikQ3V0K5 233 aa6,23□□□□□ -1,41
Syne1-205ENSMUST00000215295 Neurod1Q60867 357 aa6,22□□□□□ -1,41
Syne1-205ENSMUST00000215295 Cdk11bP24788 784 aaKnown RBP6,16□□□□□ -1,42
Syne1-205ENSMUST00000215295 Pcgf6Q99NA9 353 aa6,15□□□□□ -1,43
Syne1-205ENSMUST00000215295 CatipB9EKE5 520 aa6,13□□□□□ -1,43
Syne1-205ENSMUST00000215295 Aplp2Q06335 707 aa6,11□□□□□ -1,43
Syne1-205ENSMUST00000215295 HrcG5E8J6 738 aa6,1□□□□□ -1,43
Syne1-205ENSMUST00000215295 Ythdc1E9Q5K9 736 aaKnown RBP6,06□□□□□ -1,44
Syne1-205ENSMUST00000215295 Ehmt2Q9Z148 1263 aaKnown RBP6,06□□□□□ -1,44
Syne1-205ENSMUST00000215295 Anks4bQ8K3X6 423 aa6,05□□□□□ -1,44
Syne1-205ENSMUST00000215295 Myt1lP97500 1187 aa6,02□□□□□ -1,45
Syne1-205ENSMUST00000215295 Ttbk1Q6PCN3 1308 aa5,99□□□□□ -1,45
Syne1-205ENSMUST00000215295 Anp32bQ9EST5 272 aaKnown RBP5,97□□□□□ -1,45
Syne1-205ENSMUST00000215295 Anp32aO35381 247 aa5,95□□□□□ -1,46
Syne1-205ENSMUST00000215295 Bcl11aQ9QYE3 773 aa5,9□□□□□ -1,46
Syne1-205ENSMUST00000215295 Nop58Q6DFW4 536 aaKnown RBP5,9□□□□□ -1,47
Syne1-205ENSMUST00000215295 Zeb1Q64318 1117 aa5,86□□□□□ -1,47
Syne1-205ENSMUST00000215295 Supt5hO55201 1082 aaKnown RBP5,86□□□□□ -1,47
Syne1-205ENSMUST00000215295 Ube2uB1AUC4 352 aa5,85□□□□□ -1,47
Syne1-205ENSMUST00000215295 NeflP08551 543 aa5,84□□□□□ -1,47
Syne1-205ENSMUST00000215295 4933416C03RikQ3V063 378 aa5,84□□□□□ -1,47
Syne1-205ENSMUST00000215295 BccipQ9CWI3 316 aa5,82□□□□□ -1,48
Syne1-205ENSMUST00000215295 NclP09405 707 aaKnown RBP5,79□□□□□ -1,48
Syne1-205ENSMUST00000215295 Trim41Q5NCC3 630 aa5,79□□□□□ -1,48
Syne1-205ENSMUST00000215295 Ccdc180J3QNE4 1664 aa5,77□□□□□ -1,49
Syne1-205ENSMUST00000215295 4933402E13RikQ9D4D2 429 aa5,77□□□□□ -1,49
Syne1-205ENSMUST00000215295 Ccdc27Q3V036 639 aa5,77□□□□□ -1,49
Syne1-205ENSMUST00000215295 NrdcQ8BHG1 1161 aa5,77□□□□□ -1,49
Syne1-205ENSMUST00000215295 Hsp90aa1P07901 733 aaKnown RBP5,76□□□□□ -1,49
Syne1-205ENSMUST00000215295 ClspnQ80YR7 1315 aa5,75□□□□□ -1,49
Syne1-205ENSMUST00000215295 Znf316Q6PGE4 1016 aa5,74□□□□□ -1,49
Syne1-205ENSMUST00000215295 Rangap1P46061 589 aaKnown RBP5,74□□□□□ -1,49
Syne1-205ENSMUST00000215295 Irx3P81067 507 aa5,72□□□□□ -1,49
Syne1-205ENSMUST00000215295 AU015836B2RUM3 263 aa5,71□□□□□ -1,49
Syne1-205ENSMUST00000215295 1700123L14RikQ3V2K7 440 aa5,7□□□□□ -1,5
Syne1-205ENSMUST00000215295 Eif5bQ05D44 1216 aaKnown RBP5,69□□□□□ -1,5
Syne1-205ENSMUST00000215295 Dcaf1Q80TR8 1506 aa5,69□□□□□ -1,5
Syne1-205ENSMUST00000215295 Pknox2Q8BG99 474 aa5,68□□□□□ -1,5
Syne1-205ENSMUST00000215295 Upf2A2AT37 1269 aaKnown RBP5,67□□□□□ -1,5
Syne1-205ENSMUST00000215295 Pdcl3Q8BVF2 240 aa5,65□□□□□ -1,51
Syne1-205ENSMUST00000215295 Polr3glQ8R0C0 218 aa5,65□□□□□ -1,51
Syne1-205ENSMUST00000215295 Csrnp3P59055 597 aa5,64□□□□□ -1,51
Syne1-205ENSMUST00000215295 Rtl1Q7M732 1744 aa5,64□□□□□ -1,51
Syne1-205ENSMUST00000215295 Adam1bQ8R534 806 aa5,64□□□□□ -1,51
Syne1-205ENSMUST00000215295 DaxxO35613 739 aa5,63□□□□□ -1,51
Syne1-205ENSMUST00000215295 Htatsf1Q8BGC0 757 aa5,62□□□□□ -1,51
Syne1-205ENSMUST00000215295 Erich6D3Z6S9 713 aa5,61□□□□□ -1,51
Syne1-205ENSMUST00000215295 Map7d2A2AG50 781 aa5,6□□□□□ -1,51
Syne1-205ENSMUST00000215295 Ccer2J3QPU5 274 aa5,6□□□□□ -1,51
Syne1-205ENSMUST00000215295 Hmgb1P63158 215 aaKnown RBP5,59□□□□□ -1,51
Syne1-205ENSMUST00000215295 Znf326O88291 580 aa5,58□□□□□ -1,52
Syne1-205ENSMUST00000215295 Rrp9Q91WM3 475 aaKnown RBP5,58□□□□□ -1,52
Syne1-205ENSMUST00000215295 TonslQ6NZL6 1363 aa5,57□□□□□ -1,52
Syne1-205ENSMUST00000215295 Q8BT18 775 aa5,56□□□□□ -1,52
Syne1-205ENSMUST00000215295 Rrp12Q6P5B0 1295 aaKnown RBP5,56□□□□□ -1,52
Syne1-205ENSMUST00000215295 Trim44Q9QXA7 346 aa5,56□□□□□ -1,52
Syne1-205ENSMUST00000215295 Gtf3c3Q3TMP1 882 aa5,55□□□□□ -1,52
Syne1-205ENSMUST00000215295 Wdr43Q6ZQL4 677 aaKnown RBP5,55□□□□□ -1,52
Syne1-205ENSMUST00000215295 Gtf3c5Q8R2T8 520 aa5,55□□□□□ -1,52
Syne1-205ENSMUST00000215295 Ppm1gQ61074 542 aa5,55□□□□□ -1,52
Syne1-205ENSMUST00000215295 Calr4Q3TQS0 420 aa5,54□□□□□ -1,52
Syne1-205ENSMUST00000215295 Tnnt2P50752 301 aa5,54□□□□□ -1,52
Syne1-205ENSMUST00000215295 PtmsQ9D0J8 101 aaKnown RBP5,53□□□□□ -1,52
Syne1-205ENSMUST00000215295 Ddrgk1Q80WW9 315 aa5,53□□□□□ -1,52
Syne1-205ENSMUST00000215295 Dnttip2Q8R2M2 758 aaKnown RBP5,52□□□□□ -1,53
Syne1-205ENSMUST00000215295 Fam71e1A1L3C1 212 aa5,51□□□□□ -1,53
Syne1-205ENSMUST00000215295 Hdac5Q9Z2V6 1113 aa5,5□□□□□ -1,53
Syne1-205ENSMUST00000215295 Mbd3Q9Z2D8 285 aaKnown RBP5,49□□□□□ -1,53
Syne1-205ENSMUST00000215295 Isy1Q69ZQ2 285 aaKnown RBP5,48□□□□□ -1,53
Syne1-205ENSMUST00000215295 Gtf2a1Q99PM3 378 aa5,48□□□□□ -1,53
Syne1-205ENSMUST00000215295 CalrP14211 416 aaKnown RBP5,47□□□□□ -1,53
Syne1-205ENSMUST00000215295 Ipo9Q91YE6 1041 aa5,46□□□□□ -1,53
Syne1-205ENSMUST00000215295 Sall2Q9QX96 1004 aa5,46□□□□□ -1,54
Syne1-205ENSMUST00000215295 Ipo4Q8VI75 1082 aa5,46□□□□□ -1,54
Syne1-205ENSMUST00000215295 AampJ3QN89 436 aa5,45□□□□□ -1,54
Syne1-205ENSMUST00000215295 Trap1aP19473 224 aa5,45□□□□□ -1,54
Syne1-205ENSMUST00000215295 Tcerg1Q8CGF7 1100 aaKnown RBP5,45□□□□□ -1,54
Syne1-205ENSMUST00000215295 Fam43aQ8BUP8 424 aa5,44□□□□□ -1,54
Syne1-205ENSMUST00000215295 Fgd1P52734 960 aa5,44□□□□□ -1,54
Syne1-205ENSMUST00000215295 PrkcshO08795 521 aa5,44□□□□□ -1,54
Syne1-205ENSMUST00000215295 Mier1Q5UAK0 511 aa5,44□□□□□ -1,54
Syne1-205ENSMUST00000215295 Tpm2P58774 284 aa5,44□□□□□ -1,54
Syne1-205ENSMUST00000215295 Phf14Q9D4H9 881 aa5,43□□□□□ -1,54
Syne1-205ENSMUST00000215295 Rsph6aQ8CDR2 708 aa5,43□□□□□ -1,54
Retrieved 100 of 22,080 RNA–protein pairs in 10,6 ms