RNA–Protein interactions for RNA: ENSMUST00000215295.1

Syne1-205, Transcript of Nesprin-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Syne1, Length 27,908 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-205ENSMUST00000215295 Rpgrip1Q9EPQ2 1331 aa7.38□□□□□ -1.23
Syne1-205ENSMUST00000215295 Myt1Q8CFC2 1127 aa7.14□□□□□ -1.27
Syne1-205ENSMUST00000215295 Las1lA2BE28 776 aaKnown RBP7.06□□□□□ -1.28
Syne1-205ENSMUST00000215295 Cngb1E1AZ71 1325 aa6.95□□□□□ -1.3
Syne1-205ENSMUST00000215295 Pelp1Q9DBD5 1123 aaKnown RBP6.75□□□□□ -1.33
Syne1-205ENSMUST00000215295 Amer1Q7TS75 1132 aa6.61□□□□□ -1.35
Syne1-205ENSMUST00000215295 CenpbP27790 599 aa6.6□□□□□ -1.35
Syne1-205ENSMUST00000215295 Rtl5Q5DTT4 599 aa6.48□□□□□ -1.37
Syne1-205ENSMUST00000215295 DiexfQ8BTT6 772 aaKnown RBP6.42□□□□□ -1.38
Syne1-205ENSMUST00000215295 Wdr66E9Q743 1299 aa6.39□□□□□ -1.39
Syne1-205ENSMUST00000215295 Rhox8Q6VSS7 320 aa6.37□□□□□ -1.39
Syne1-205ENSMUST00000215295 Ccdc9Q8VC31 543 aaKnown RBP6.34□□□□□ -1.39
Syne1-205ENSMUST00000215295 Acin1Q9JIX8 1338 aaKnown RBP6.31□□□□□ -1.4
Syne1-205ENSMUST00000215295 Stra8P70278 393 aa6.28□□□□□ -1.4
Syne1-205ENSMUST00000215295 NefmP08553 848 aa6.28□□□□□ -1.4
Syne1-205ENSMUST00000215295 Tnnt3Q9QZ47 272 aa6.27□□□□□ -1.41
Syne1-205ENSMUST00000215295 4930567H17RikQ3V0K5 233 aa6.23□□□□□ -1.41
Syne1-205ENSMUST00000215295 Neurod1Q60867 357 aa6.22□□□□□ -1.41
Syne1-205ENSMUST00000215295 Cdk11bP24788 784 aaKnown RBP6.16□□□□□ -1.42
Syne1-205ENSMUST00000215295 Pcgf6Q99NA9 353 aa6.15□□□□□ -1.43
Syne1-205ENSMUST00000215295 CatipB9EKE5 520 aa6.13□□□□□ -1.43
Syne1-205ENSMUST00000215295 Aplp2Q06335 707 aa6.11□□□□□ -1.43
Syne1-205ENSMUST00000215295 HrcG5E8J6 738 aa6.1□□□□□ -1.43
Syne1-205ENSMUST00000215295 Ythdc1E9Q5K9 736 aaKnown RBP6.06□□□□□ -1.44
Syne1-205ENSMUST00000215295 Ehmt2Q9Z148 1263 aaKnown RBP6.06□□□□□ -1.44
Syne1-205ENSMUST00000215295 Anks4bQ8K3X6 423 aa6.05□□□□□ -1.44
Syne1-205ENSMUST00000215295 Myt1lP97500 1187 aa6.02□□□□□ -1.45
Syne1-205ENSMUST00000215295 Ttbk1Q6PCN3 1308 aa5.99□□□□□ -1.45
Syne1-205ENSMUST00000215295 Anp32bQ9EST5 272 aaKnown RBP5.97□□□□□ -1.45
Syne1-205ENSMUST00000215295 Anp32aO35381 247 aa5.95□□□□□ -1.46
Syne1-205ENSMUST00000215295 Bcl11aQ9QYE3 773 aa5.9□□□□□ -1.46
Syne1-205ENSMUST00000215295 Nop58Q6DFW4 536 aaKnown RBP5.9□□□□□ -1.47
Syne1-205ENSMUST00000215295 Zeb1Q64318 1117 aa5.86□□□□□ -1.47
Syne1-205ENSMUST00000215295 Supt5hO55201 1082 aaKnown RBP5.86□□□□□ -1.47
Syne1-205ENSMUST00000215295 Ube2uB1AUC4 352 aa5.85□□□□□ -1.47
Syne1-205ENSMUST00000215295 NeflP08551 543 aa5.84□□□□□ -1.47
Syne1-205ENSMUST00000215295 4933416C03RikQ3V063 378 aa5.84□□□□□ -1.47
Syne1-205ENSMUST00000215295 BccipQ9CWI3 316 aa5.82□□□□□ -1.48
Syne1-205ENSMUST00000215295 NclP09405 707 aaKnown RBP5.79□□□□□ -1.48
Syne1-205ENSMUST00000215295 Trim41Q5NCC3 630 aa5.79□□□□□ -1.48
Syne1-205ENSMUST00000215295 Ccdc180J3QNE4 1664 aa5.77□□□□□ -1.49
Syne1-205ENSMUST00000215295 4933402E13RikQ9D4D2 429 aa5.77□□□□□ -1.49
Syne1-205ENSMUST00000215295 Ccdc27Q3V036 639 aa5.77□□□□□ -1.49
Syne1-205ENSMUST00000215295 NrdcQ8BHG1 1161 aa5.77□□□□□ -1.49
Syne1-205ENSMUST00000215295 Hsp90aa1P07901 733 aaKnown RBP5.76□□□□□ -1.49
Syne1-205ENSMUST00000215295 ClspnQ80YR7 1315 aa5.75□□□□□ -1.49
Syne1-205ENSMUST00000215295 Znf316Q6PGE4 1016 aa5.74□□□□□ -1.49
Syne1-205ENSMUST00000215295 Rangap1P46061 589 aaKnown RBP5.74□□□□□ -1.49
Syne1-205ENSMUST00000215295 Irx3P81067 507 aa5.72□□□□□ -1.49
Syne1-205ENSMUST00000215295 AU015836B2RUM3 263 aa5.71□□□□□ -1.49
Syne1-205ENSMUST00000215295 1700123L14RikQ3V2K7 440 aa5.7□□□□□ -1.5
Syne1-205ENSMUST00000215295 Eif5bQ05D44 1216 aaKnown RBP5.69□□□□□ -1.5
Syne1-205ENSMUST00000215295 Dcaf1Q80TR8 1506 aa5.69□□□□□ -1.5
Syne1-205ENSMUST00000215295 Pknox2Q8BG99 474 aa5.68□□□□□ -1.5
Syne1-205ENSMUST00000215295 Upf2A2AT37 1269 aaKnown RBP5.67□□□□□ -1.5
Syne1-205ENSMUST00000215295 Pdcl3Q8BVF2 240 aa5.65□□□□□ -1.51
Syne1-205ENSMUST00000215295 Polr3glQ8R0C0 218 aa5.65□□□□□ -1.51
Syne1-205ENSMUST00000215295 Csrnp3P59055 597 aa5.64□□□□□ -1.51
Syne1-205ENSMUST00000215295 Rtl1Q7M732 1744 aa5.64□□□□□ -1.51
Syne1-205ENSMUST00000215295 Adam1bQ8R534 806 aa5.64□□□□□ -1.51
Syne1-205ENSMUST00000215295 DaxxO35613 739 aa5.63□□□□□ -1.51
Syne1-205ENSMUST00000215295 Htatsf1Q8BGC0 757 aa5.62□□□□□ -1.51
Syne1-205ENSMUST00000215295 Erich6D3Z6S9 713 aa5.61□□□□□ -1.51
Syne1-205ENSMUST00000215295 Map7d2A2AG50 781 aa5.6□□□□□ -1.51
Syne1-205ENSMUST00000215295 Ccer2J3QPU5 274 aa5.6□□□□□ -1.51
Syne1-205ENSMUST00000215295 Hmgb1P63158 215 aaKnown RBP5.59□□□□□ -1.51
Syne1-205ENSMUST00000215295 Znf326O88291 580 aa5.58□□□□□ -1.52
Syne1-205ENSMUST00000215295 Rrp9Q91WM3 475 aaKnown RBP5.58□□□□□ -1.52
Syne1-205ENSMUST00000215295 TonslQ6NZL6 1363 aa5.57□□□□□ -1.52
Syne1-205ENSMUST00000215295 Q8BT18 775 aa5.56□□□□□ -1.52
Syne1-205ENSMUST00000215295 Rrp12Q6P5B0 1295 aaKnown RBP5.56□□□□□ -1.52
Syne1-205ENSMUST00000215295 Trim44Q9QXA7 346 aa5.56□□□□□ -1.52
Syne1-205ENSMUST00000215295 Gtf3c3Q3TMP1 882 aa5.55□□□□□ -1.52
Syne1-205ENSMUST00000215295 Wdr43Q6ZQL4 677 aaKnown RBP5.55□□□□□ -1.52
Syne1-205ENSMUST00000215295 Gtf3c5Q8R2T8 520 aa5.55□□□□□ -1.52
Syne1-205ENSMUST00000215295 Ppm1gQ61074 542 aa5.55□□□□□ -1.52
Syne1-205ENSMUST00000215295 Calr4Q3TQS0 420 aa5.54□□□□□ -1.52
Syne1-205ENSMUST00000215295 Tnnt2P50752 301 aa5.54□□□□□ -1.52
Syne1-205ENSMUST00000215295 PtmsQ9D0J8 101 aaKnown RBP5.53□□□□□ -1.52
Syne1-205ENSMUST00000215295 Ddrgk1Q80WW9 315 aa5.53□□□□□ -1.52
Syne1-205ENSMUST00000215295 Dnttip2Q8R2M2 758 aaKnown RBP5.52□□□□□ -1.53
Syne1-205ENSMUST00000215295 Fam71e1A1L3C1 212 aa5.51□□□□□ -1.53
Syne1-205ENSMUST00000215295 Hdac5Q9Z2V6 1113 aa5.5□□□□□ -1.53
Syne1-205ENSMUST00000215295 Mbd3Q9Z2D8 285 aaKnown RBP5.49□□□□□ -1.53
Syne1-205ENSMUST00000215295 Isy1Q69ZQ2 285 aaKnown RBP5.48□□□□□ -1.53
Syne1-205ENSMUST00000215295 Gtf2a1Q99PM3 378 aa5.48□□□□□ -1.53
Syne1-205ENSMUST00000215295 CalrP14211 416 aaKnown RBP5.47□□□□□ -1.53
Syne1-205ENSMUST00000215295 Ipo9Q91YE6 1041 aa5.46□□□□□ -1.53
Syne1-205ENSMUST00000215295 Sall2Q9QX96 1004 aa5.46□□□□□ -1.54
Syne1-205ENSMUST00000215295 Ipo4Q8VI75 1082 aa5.46□□□□□ -1.54
Syne1-205ENSMUST00000215295 AampJ3QN89 436 aa5.45□□□□□ -1.54
Syne1-205ENSMUST00000215295 Trap1aP19473 224 aa5.45□□□□□ -1.54
Syne1-205ENSMUST00000215295 Tcerg1Q8CGF7 1100 aaKnown RBP5.45□□□□□ -1.54
Syne1-205ENSMUST00000215295 Fam43aQ8BUP8 424 aa5.44□□□□□ -1.54
Syne1-205ENSMUST00000215295 Fgd1P52734 960 aa5.44□□□□□ -1.54
Syne1-205ENSMUST00000215295 PrkcshO08795 521 aa5.44□□□□□ -1.54
Syne1-205ENSMUST00000215295 Mier1Q5UAK0 511 aa5.44□□□□□ -1.54
Syne1-205ENSMUST00000215295 Tpm2P58774 284 aa5.44□□□□□ -1.54
Syne1-205ENSMUST00000215295 Phf14Q9D4H9 881 aa5.43□□□□□ -1.54
Syne1-205ENSMUST00000215295 Rsph6aQ8CDR2 708 aa5.43□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms