RNA–Protein interactions for RNA: ENSMUST00000193389.1

Pcdha6-201, Transcript of Pcdha6 protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha6, Length 4,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6-201ENSMUST00000193389 Rhox8Q6VSS7 320 aa18.82■□□□□ 0.6
Pcdha6-201ENSMUST00000193389 Rpgrip1Q9EPQ2 1331 aa17.51■□□□□ 0.39
Pcdha6-201ENSMUST00000193389 Las1lA2BE28 776 aaKnown RBP17.5■□□□□ 0.39
Pcdha6-201ENSMUST00000193389 Cngb1E1AZ71 1325 aa17.31■□□□□ 0.36
Pcdha6-201ENSMUST00000193389 NischQ80TM9 1593 aa17.25■□□□□ 0.35
Pcdha6-201ENSMUST00000193389 Amer1Q7TS75 1132 aa17.01■□□□□ 0.31
Pcdha6-201ENSMUST00000193389 Ccdc136Q3TVA9 1136 aa16.99■□□□□ 0.31
Pcdha6-201ENSMUST00000193389 Pelp1Q9DBD5 1123 aaKnown RBP16.89■□□□□ 0.29
Pcdha6-201ENSMUST00000193389 Myt1Q8CFC2 1127 aa16.87■□□□□ 0.29
Pcdha6-201ENSMUST00000193389 Esf1Q3V1V3 845 aaKnown RBP16.87■□□□□ 0.29
Pcdha6-201ENSMUST00000193389 Abcc9P70170 1546 aa16.85■□□□□ 0.29
Pcdha6-201ENSMUST00000193389 Gm35339A0A140LHH9 1649 aa16.57■□□□□ 0.24
Pcdha6-201ENSMUST00000193389 CenpbP27790 599 aa16.46■□□□□ 0.22
Pcdha6-201ENSMUST00000193389 Zeb1Q64318 1117 aa16.39■□□□□ 0.21
Pcdha6-201ENSMUST00000193389 DiexfQ8BTT6 772 aaKnown RBP16.32■□□□□ 0.2
Pcdha6-201ENSMUST00000193389 Trim41Q5NCC3 630 aa16.31■□□□□ 0.2
Pcdha6-201ENSMUST00000193389 Gab3Q8BSM5 595 aa16.3■□□□□ 0.2
Pcdha6-201ENSMUST00000193389 Il27Q8K3I6 234 aa16.18■□□□□ 0.18
Pcdha6-201ENSMUST00000193389 Npm2Q80W85 207 aa16.17■□□□□ 0.18
Pcdha6-201ENSMUST00000193389 4930567H17RikQ3V0K5 233 aa16.14■□□□□ 0.17
Pcdha6-201ENSMUST00000193389 Ehmt2Q9Z148 1263 aaKnown RBP16.13■□□□□ 0.17
Pcdha6-201ENSMUST00000193389 Myt1lP97500 1187 aa16.08■□□□□ 0.16
Pcdha6-201ENSMUST00000193389 Zcchc6Q5BLK4 1491 aaKnown RBP16.02■□□□□ 0.16
Pcdha6-201ENSMUST00000193389 Wdr66E9Q743 1299 aa15.95■□□□□ 0.14
Pcdha6-201ENSMUST00000193389 Abcc8B2RUS7 1588 aa15.95■□□□□ 0.14
Pcdha6-201ENSMUST00000193389 Ube2uB1AUC4 352 aa15.85■□□□□ 0.13
Pcdha6-201ENSMUST00000193389 Acin1Q9JIX8 1338 aaKnown RBP15.64■□□□□ 0.09
Pcdha6-201ENSMUST00000193389 Rtl5Q5DTT4 599 aa15.56■□□□□ 0.08
Pcdha6-201ENSMUST00000193389 Npm1Q61937 292 aaKnown RBP15.55■□□□□ 0.08
Pcdha6-201ENSMUST00000193389 Stra8P70278 393 aa15.5■□□□□ 0.07
Pcdha6-201ENSMUST00000193389 Ttbk1Q6PCN3 1308 aa15.47■□□□□ 0.07
Pcdha6-201ENSMUST00000193389 4933416C03RikQ3V063 378 aa15.43■□□□□ 0.06
Pcdha6-201ENSMUST00000193389 Ubl4bQ9CQ84 188 aa15.42■□□□□ 0.06
Pcdha6-201ENSMUST00000193389 Ap3b1Q9Z1T1 1105 aa15.42■□□□□ 0.06
Pcdha6-201ENSMUST00000193389 Ifnlr1Q8CGK5 535 aa15.42■□□□□ 0.06
Pcdha6-201ENSMUST00000193389 Ythdc1E9Q5K9 736 aaKnown RBP15.41■□□□□ 0.06
Pcdha6-201ENSMUST00000193389 NefmP08553 848 aa15.4■□□□□ 0.06
Pcdha6-201ENSMUST00000193389 Pcgf6Q99NA9 353 aa15.36■□□□□ 0.05
Pcdha6-201ENSMUST00000193389 UbtfP25976 765 aaKnown RBP15.33■□□□□ 0.04
Pcdha6-201ENSMUST00000193389 Cdk11bP24788 784 aaKnown RBP15.3■□□□□ 0.04
Pcdha6-201ENSMUST00000193389 Tnnt3Q9QZ47 272 aa15.26■□□□□ 0.03
Pcdha6-201ENSMUST00000193389 Plppr3Q7TPB0 716 aa15.24■□□□□ 0.03
Pcdha6-201ENSMUST00000193389 NacadQ5SWP3 1504 aa15.2■□□□□ 0.02
Pcdha6-201ENSMUST00000193389 Fkbp15Q6P9Q6 1216 aaKnown RBP15.19■□□□□ 0.02
Pcdha6-201ENSMUST00000193389 Rb1cc1Q9ESK9 1588 aa15.11■□□□□ 0.01
Pcdha6-201ENSMUST00000193389 Zbtb7cQ8VCZ7 619 aa15.08■□□□□ 0
Pcdha6-201ENSMUST00000193389 Fam50aQ9WV03 339 aaKnown RBP15.08■□□□□ 0
Pcdha6-201ENSMUST00000193389 Lmod2Q3UHZ5 550 aa15.07■□□□□ 0
Pcdha6-201ENSMUST00000193389 Nop58Q6DFW4 536 aaKnown RBP15.02■□□□□ -0
Pcdha6-201ENSMUST00000193389 HrcG5E8J6 738 aa15.01□□□□□ -0.01
Pcdha6-201ENSMUST00000193389 Brd4Q9ESU6 1400 aaKnown RBP14.99□□□□□ -0.01
Pcdha6-201ENSMUST00000193389 Kdm5dQ62240 1548 aa14.95□□□□□ -0.02
Pcdha6-201ENSMUST00000193389 Ccdc180J3QNE4 1664 aa14.9□□□□□ -0.02
Pcdha6-201ENSMUST00000193389 Ccdc9Q8VC31 543 aaKnown RBP14.9□□□□□ -0.02
Pcdha6-201ENSMUST00000193389 Chic1Q8CBW7 227 aa14.89□□□□□ -0.03
Pcdha6-201ENSMUST00000193389 Neurod1Q60867 357 aa14.88□□□□□ -0.03
Pcdha6-201ENSMUST00000193389 Slc24a1Q91WD8 1130 aa14.87□□□□□ -0.03
Pcdha6-201ENSMUST00000193389 Hnrnpul2Q00PI9 745 aaKnown RBP14.87□□□□□ -0.03
Pcdha6-201ENSMUST00000193389 Bcl11aQ9QYE3 773 aa14.86□□□□□ -0.03
Pcdha6-201ENSMUST00000193389 Gm13697A2AK42 830 aa14.86□□□□□ -0.03
Pcdha6-201ENSMUST00000193389 Plekhg3Q4VAC9 1341 aa14.83□□□□□ -0.03
Pcdha6-201ENSMUST00000193389 Kif15Q6P9L6 1387 aa14.83□□□□□ -0.04
Pcdha6-201ENSMUST00000193389 Ercc6F8VPZ5 1481 aa14.82□□□□□ -0.04
Pcdha6-201ENSMUST00000193389 Os9Q8K2C7 672 aa14.81□□□□□ -0.04
Pcdha6-201ENSMUST00000193389 Supt5hO55201 1082 aaKnown RBP14.8□□□□□ -0.04
Pcdha6-201ENSMUST00000193389 Anp32aO35381 247 aa14.77□□□□□ -0.04
Pcdha6-201ENSMUST00000193389 NeflP08551 543 aa14.77□□□□□ -0.05
Pcdha6-201ENSMUST00000193389 Anp32bQ9EST5 272 aaKnown RBP14.76□□□□□ -0.05
Pcdha6-201ENSMUST00000193389 Aplp2Q06335 707 aa14.75□□□□□ -0.05
Pcdha6-201ENSMUST00000193389 NrdcQ8BHG1 1161 aa14.7□□□□□ -0.06
Pcdha6-201ENSMUST00000193389 Baz1aO88379 1555 aa14.69□□□□□ -0.06
Pcdha6-201ENSMUST00000193389 Rsf1E9PWW9 1441 aaKnown RBP14.69□□□□□ -0.06
Pcdha6-201ENSMUST00000193389 DaxxO35613 739 aa14.68□□□□□ -0.06
Pcdha6-201ENSMUST00000193389 Pds5bQ4VA53 1446 aaKnown RBP14.67□□□□□ -0.06
Pcdha6-201ENSMUST00000193389 Dcaf1Q80TR8 1506 aa14.67□□□□□ -0.06
Pcdha6-201ENSMUST00000193389 Erich6D3Z6S9 713 aa14.63□□□□□ -0.07
Pcdha6-201ENSMUST00000193389 NclP09405 707 aaKnown RBP14.62□□□□□ -0.07
Pcdha6-201ENSMUST00000193389 Sycp2Q9CUU3 1500 aa14.57□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Atp1b4Q99ME6 356 aa14.57□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Anks4bQ8K3X6 423 aa14.57□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Arhgap27A2AB59 869 aa14.55□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Zbtb4Q5F293 982 aa14.55□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Gm13695A2AK44 830 aa14.54□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 ScribQ80U72 1612 aa14.54□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Eif5bQ05D44 1216 aaKnown RBP14.53□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Safb2Q80YR5 991 aaKnown RBP14.52□□□□□ -0.08
Pcdha6-201ENSMUST00000193389 Rtl1Q7M732 1744 aa14.52□□□□□ -0.09
Pcdha6-201ENSMUST00000193389 Ppargc1bQ8VHJ7 1014 aa14.49□□□□□ -0.09
Pcdha6-201ENSMUST00000193389 Clip1Q922J3 1391 aa14.48□□□□□ -0.09
Pcdha6-201ENSMUST00000193389 Cep164Q5DU05 1446 aa14.47□□□□□ -0.09
Pcdha6-201ENSMUST00000193389 Ccdc18Q640L5 1455 aa14.45□□□□□ -0.1
Pcdha6-201ENSMUST00000193389 Chic2Q9D9G3 165 aa14.43□□□□□ -0.1
Pcdha6-201ENSMUST00000193389 Csrnp3P59055 597 aa14.41□□□□□ -0.1
Pcdha6-201ENSMUST00000193389 Arid3cA6PWV5 409 aa14.39□□□□□ -0.11
Pcdha6-201ENSMUST00000193389 CatipB9EKE5 520 aa14.39□□□□□ -0.11
Pcdha6-201ENSMUST00000193389 Prdm10Q3UTQ7 1184 aa14.39□□□□□ -0.11
Pcdha6-201ENSMUST00000193389 Ppp1r18Q8BQ30 594 aa14.39□□□□□ -0.11
Pcdha6-201ENSMUST00000193389 Eid3Q3V124 375 aa14.38□□□□□ -0.11
Pcdha6-201ENSMUST00000193389 Golga3P55937 1487 aa14.38□□□□□ -0.11
Pcdha6-201ENSMUST00000193389 ClspnQ80YR7 1315 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms