RNA–Protein interactions for RNA: ENSMUST00000189948.1

Gm28315-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28315, Length 2,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28315-201ENSMUST00000189948 Chic1Q8CBW7 227 aa16.8■□□□□ 0.28
Gm28315-201ENSMUST00000189948 Mapk8ip2Q9ERE9 830 aa16.54■□□□□ 0.24
Gm28315-201ENSMUST00000189948 Phf23Q8BSN5 401 aa15.29■□□□□ 0.04
Gm28315-201ENSMUST00000189948 Plppr3Q7TPB0 716 aa14.54□□□□□ -0.08
Gm28315-201ENSMUST00000189948 Gab3Q8BSM5 595 aa14.44□□□□□ -0.1
Gm28315-201ENSMUST00000189948 Senp3Q9EP97 568 aaKnown RBP13.93□□□□□ -0.18
Gm28315-201ENSMUST00000189948 Rpgrip1Q9EPQ2 1331 aa13.8□□□□□ -0.2
Gm28315-201ENSMUST00000189948 Kcna4Q61423 654 aa13.4□□□□□ -0.26
Gm28315-201ENSMUST00000189948 DiexfQ8BTT6 772 aaKnown RBP13.17□□□□□ -0.3
Gm28315-201ENSMUST00000189948 Myt1Q8CFC2 1127 aa13.13□□□□□ -0.31
Gm28315-201ENSMUST00000189948 Rtl1Q7M732 1744 aa13.12□□□□□ -0.31
Gm28315-201ENSMUST00000189948 Acin1Q9JIX8 1338 aaKnown RBP13.07□□□□□ -0.32
Gm28315-201ENSMUST00000189948 Ccdc180J3QNE4 1664 aa12.98□□□□□ -0.33
Gm28315-201ENSMUST00000189948 Pcgf6Q99NA9 353 aa12.97□□□□□ -0.33
Gm28315-201ENSMUST00000189948 Gm35339A0A140LHH9 1649 aa12.77□□□□□ -0.37
Gm28315-201ENSMUST00000189948 Amer1Q7TS75 1132 aa12.74□□□□□ -0.37
Gm28315-201ENSMUST00000189948 CenpbP27790 599 aa12.71□□□□□ -0.37
Gm28315-201ENSMUST00000189948 CatipB9EKE5 520 aa12.71□□□□□ -0.37
Gm28315-201ENSMUST00000189948 Las1lA2BE28 776 aaKnown RBP12.69□□□□□ -0.38
Gm28315-201ENSMUST00000189948 Rhox8Q6VSS7 320 aa12.67□□□□□ -0.38
Gm28315-201ENSMUST00000189948 NischQ80TM9 1593 aa12.62□□□□□ -0.39
Gm28315-201ENSMUST00000189948 Bcl11aQ9QYE3 773 aa12.6□□□□□ -0.39
Gm28315-201ENSMUST00000189948 Trim41Q5NCC3 630 aa12.57□□□□□ -0.4
Gm28315-201ENSMUST00000189948 Dcaf1Q80TR8 1506 aa12.54□□□□□ -0.4
Gm28315-201ENSMUST00000189948 Neurod1Q60867 357 aa12.5□□□□□ -0.41
Gm28315-201ENSMUST00000189948 Ube2uB1AUC4 352 aa12.41□□□□□ -0.42
Gm28315-201ENSMUST00000189948 Supt5hO55201 1082 aaKnown RBP12.4□□□□□ -0.42
Gm28315-201ENSMUST00000189948 Abcc9P70170 1546 aa12.34□□□□□ -0.43
Gm28315-201ENSMUST00000189948 1700123L14RikQ3V2K7 440 aa12.33□□□□□ -0.44
Gm28315-201ENSMUST00000189948 Ttbk1Q6PCN3 1308 aa12.3□□□□□ -0.44
Gm28315-201ENSMUST00000189948 Zcchc6Q5BLK4 1491 aaKnown RBP12.29□□□□□ -0.44
Gm28315-201ENSMUST00000189948 Hoxd11P23813 323 aa12.25□□□□□ -0.45
Gm28315-201ENSMUST00000189948 PrkcshO08795 521 aa12.23□□□□□ -0.45
Gm28315-201ENSMUST00000189948 Fam163aQ8CAA5 168 aa12.23□□□□□ -0.45
Gm28315-201ENSMUST00000189948 Anks4bQ8K3X6 423 aa12.22□□□□□ -0.45
Gm28315-201ENSMUST00000189948 Abcc8B2RUS7 1588 aa12.22□□□□□ -0.45
Gm28315-201ENSMUST00000189948 HrcG5E8J6 738 aa12.21□□□□□ -0.45
Gm28315-201ENSMUST00000189948 Ehmt2Q9Z148 1263 aaKnown RBP12.21□□□□□ -0.45
Gm28315-201ENSMUST00000189948 Aplp2Q06335 707 aa12.15□□□□□ -0.46
Gm28315-201ENSMUST00000189948 Trap1aP19473 224 aa12.15□□□□□ -0.47
Gm28315-201ENSMUST00000189948 Cngb1E1AZ71 1325 aa12.08□□□□□ -0.48
Gm28315-201ENSMUST00000189948 Csrnp3P59055 597 aa12.08□□□□□ -0.48
Gm28315-201ENSMUST00000189948 ScribQ80U72 1612 aa11.92□□□□□ -0.5
Gm28315-201ENSMUST00000189948 Dmrt2Q8BG36 561 aa11.91□□□□□ -0.5
Gm28315-201ENSMUST00000189948 NefmP08553 848 aa11.88□□□□□ -0.51
Gm28315-201ENSMUST00000189948 Gtf3c5Q8R2T8 520 aa11.87□□□□□ -0.51
Gm28315-201ENSMUST00000189948 Pknox2Q8BG99 474 aa11.86□□□□□ -0.51
Gm28315-201ENSMUST00000189948 Sall2Q9QX96 1004 aa11.86□□□□□ -0.51
Gm28315-201ENSMUST00000189948 BccipQ9CWI3 316 aa11.85□□□□□ -0.51
Gm28315-201ENSMUST00000189948 Zeb1Q64318 1117 aa11.79□□□□□ -0.52
Gm28315-201ENSMUST00000189948 NrdcQ8BHG1 1161 aa11.78□□□□□ -0.52
Gm28315-201ENSMUST00000189948 ArxO35085 564 aa11.77□□□□□ -0.53
Gm28315-201ENSMUST00000189948 Fgd1P52734 960 aa11.77□□□□□ -0.53
Gm28315-201ENSMUST00000189948 Cdk11bP24788 784 aaKnown RBP11.74□□□□□ -0.53
Gm28315-201ENSMUST00000189948 Ppargc1bQ8VHJ7 1014 aa11.74□□□□□ -0.53
Gm28315-201ENSMUST00000189948 Znf219Q6IQX8 726 aa11.72□□□□□ -0.53
Gm28315-201ENSMUST00000189948 Nop58Q6DFW4 536 aaKnown RBP11.65□□□□□ -0.54
Gm28315-201ENSMUST00000189948 TimelessQ9R1X4 1197 aa11.62□□□□□ -0.55
Gm28315-201ENSMUST00000189948 Fam71e1A1L3C1 212 aa11.6□□□□□ -0.55
Gm28315-201ENSMUST00000189948 Cep164Q5DU05 1446 aa11.58□□□□□ -0.56
Gm28315-201ENSMUST00000189948 Rtl5Q5DTT4 599 aa11.55□□□□□ -0.56
Gm28315-201ENSMUST00000189948 ClspnQ80YR7 1315 aa11.55□□□□□ -0.56
Gm28315-201ENSMUST00000189948 NacadQ5SWP3 1504 aa11.54□□□□□ -0.56
Gm28315-201ENSMUST00000189948 Znf316Q6PGE4 1016 aa11.53□□□□□ -0.56
Gm28315-201ENSMUST00000189948 Mier1Q5UAK0 511 aa11.52□□□□□ -0.56
Gm28315-201ENSMUST00000189948 Ifnlr1Q8CGK5 535 aa11.52□□□□□ -0.56
Gm28315-201ENSMUST00000189948 Chrna2Q91X60 512 aa11.52□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Gm38655A0A286YDK6 273 aa11.51□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Eif5bQ05D44 1216 aaKnown RBP11.49□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Atf5O70191 283 aa11.48□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Tnnt3Q9QZ47 272 aa11.47□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Kdm5dQ62240 1548 aa11.47□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Scaf1Q5U4C3 1256 aaKnown RBP11.47□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Hdac5Q9Z2V6 1113 aa11.46□□□□□ -0.57
Gm28315-201ENSMUST00000189948 Dnajc5bQ9CQ94 199 aa11.45□□□□□ -0.58
Gm28315-201ENSMUST00000189948 Rsph4aQ8BYM7 716 aa11.43□□□□□ -0.58
Gm28315-201ENSMUST00000189948 Wdr66E9Q743 1299 aa11.42□□□□□ -0.58
Gm28315-201ENSMUST00000189948 Aebp2Q9Z248 504 aaKnown RBP11.42□□□□□ -0.58
Gm28315-201ENSMUST00000189948 Rimbp2Q80U40 1072 aa11.38□□□□□ -0.59
Gm28315-201ENSMUST00000189948 Anp32aO35381 247 aa11.36□□□□□ -0.59
Gm28315-201ENSMUST00000189948 Pelp1Q9DBD5 1123 aaKnown RBP11.35□□□□□ -0.59
Gm28315-201ENSMUST00000189948 Sycp2Q9CUU3 1500 aa11.34□□□□□ -0.59
Gm28315-201ENSMUST00000189948 Hnrnpul2Q00PI9 745 aaKnown RBP11.29□□□□□ -0.6
Gm28315-201ENSMUST00000189948 SafbD3YXK2 937 aaKnown RBP11.28□□□□□ -0.6
Gm28315-201ENSMUST00000189948 Ncbp3Q8BZR9 615 aaKnown RBP11.28□□□□□ -0.6
Gm28315-201ENSMUST00000189948 Ccdc136Q3TVA9 1136 aa11.27□□□□□ -0.61
Gm28315-201ENSMUST00000189948 ArsiQ32KI9 573 aa11.24□□□□□ -0.61
Gm28315-201ENSMUST00000189948 Slc4a1apE9PX68 744 aa11.23□□□□□ -0.61
Gm28315-201ENSMUST00000189948 BicraF8VPZ9 1578 aa11.22□□□□□ -0.61
Gm28315-201ENSMUST00000189948 Ube2q2Q8K2Z8 378 aa11.2□□□□□ -0.62
Gm28315-201ENSMUST00000189948 Ccdc9Q8VC31 543 aaKnown RBP11.2□□□□□ -0.62
Gm28315-201ENSMUST00000189948 Zfp777B9EKF4 885 aa11.17□□□□□ -0.62
Gm28315-201ENSMUST00000189948 Gtf3c3Q3TMP1 882 aa11.16□□□□□ -0.62
Gm28315-201ENSMUST00000189948 4930567H17RikQ3V0K5 233 aa11.14□□□□□ -0.63
Gm28315-201ENSMUST00000189948 TonslQ6NZL6 1363 aa11.14□□□□□ -0.63
Gm28315-201ENSMUST00000189948 Upf2A2AT37 1269 aaKnown RBP11.12□□□□□ -0.63
Gm28315-201ENSMUST00000189948 Rb1cc1Q9ESK9 1588 aa11.11□□□□□ -0.63
Gm28315-201ENSMUST00000189948 Akt1s1Q9D1F4 257 aa11.09□□□□□ -0.63
Gm28315-201ENSMUST00000189948 Nolc1E9Q5C9 702 aaKnown RBP11.09□□□□□ -0.63
Gm28315-201ENSMUST00000189948 Ppp4r2Q0VGB7 417 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms