RNA–Protein interactions for RNA: ENSMUST00000187794.1

Gm28395-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28395, Length 2,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28395-201ENSMUST00000187794 Chic1Q8CBW7 227 aa17.26■□□□□ 0.35
Gm28395-201ENSMUST00000187794 Mapk8ip2Q9ERE9 830 aa16.91■□□□□ 0.3
Gm28395-201ENSMUST00000187794 Phf23Q8BSN5 401 aa15.63■□□□□ 0.09
Gm28395-201ENSMUST00000187794 Plppr3Q7TPB0 716 aa15.02□□□□□ -0.01
Gm28395-201ENSMUST00000187794 Gab3Q8BSM5 595 aa14.89□□□□□ -0.03
Gm28395-201ENSMUST00000187794 Senp3Q9EP97 568 aaKnown RBP14.28□□□□□ -0.12
Gm28395-201ENSMUST00000187794 Kcna4Q61423 654 aa13.78□□□□□ -0.2
Gm28395-201ENSMUST00000187794 Rpgrip1Q9EPQ2 1331 aa13.63□□□□□ -0.23
Gm28395-201ENSMUST00000187794 Rtl1Q7M732 1744 aa13.31□□□□□ -0.28
Gm28395-201ENSMUST00000187794 Ccdc180J3QNE4 1664 aa13.1□□□□□ -0.31
Gm28395-201ENSMUST00000187794 Acin1Q9JIX8 1338 aaKnown RBP13.02□□□□□ -0.33
Gm28395-201ENSMUST00000187794 NischQ80TM9 1593 aa12.88□□□□□ -0.35
Gm28395-201ENSMUST00000187794 Pcgf6Q99NA9 353 aa12.84□□□□□ -0.35
Gm28395-201ENSMUST00000187794 Abcc9P70170 1546 aa12.63□□□□□ -0.39
Gm28395-201ENSMUST00000187794 Trap1aP19473 224 aa12.59□□□□□ -0.39
Gm28395-201ENSMUST00000187794 Dcaf1Q80TR8 1506 aa12.57□□□□□ -0.4
Gm28395-201ENSMUST00000187794 Hoxd11P23813 323 aa12.57□□□□□ -0.4
Gm28395-201ENSMUST00000187794 Gm35339A0A140LHH9 1649 aa12.52□□□□□ -0.4
Gm28395-201ENSMUST00000187794 Fam163aQ8CAA5 168 aa12.51□□□□□ -0.41
Gm28395-201ENSMUST00000187794 Las1lA2BE28 776 aaKnown RBP12.5□□□□□ -0.41
Gm28395-201ENSMUST00000187794 Zcchc6Q5BLK4 1491 aaKnown RBP12.49□□□□□ -0.41
Gm28395-201ENSMUST00000187794 Trim41Q5NCC3 630 aa12.47□□□□□ -0.41
Gm28395-201ENSMUST00000187794 Neurod1Q60867 357 aa12.43□□□□□ -0.42
Gm28395-201ENSMUST00000187794 Myt1Q8CFC2 1127 aa12.43□□□□□ -0.42
Gm28395-201ENSMUST00000187794 Rhox8Q6VSS7 320 aa12.37□□□□□ -0.43
Gm28395-201ENSMUST00000187794 Ube2uB1AUC4 352 aa12.37□□□□□ -0.43
Gm28395-201ENSMUST00000187794 Supt5hO55201 1082 aaKnown RBP12.37□□□□□ -0.43
Gm28395-201ENSMUST00000187794 DiexfQ8BTT6 772 aaKnown RBP12.33□□□□□ -0.44
Gm28395-201ENSMUST00000187794 Ehmt2Q9Z148 1263 aaKnown RBP12.32□□□□□ -0.44
Gm28395-201ENSMUST00000187794 CenpbP27790 599 aa12.29□□□□□ -0.44
Gm28395-201ENSMUST00000187794 Dmrt2Q8BG36 561 aa12.27□□□□□ -0.45
Gm28395-201ENSMUST00000187794 1700123L14RikQ3V2K7 440 aa12.21□□□□□ -0.45
Gm28395-201ENSMUST00000187794 Ppargc1bQ8VHJ7 1014 aa12.13□□□□□ -0.47
Gm28395-201ENSMUST00000187794 HrcG5E8J6 738 aa12.12□□□□□ -0.47
Gm28395-201ENSMUST00000187794 Anks4bQ8K3X6 423 aa12.07□□□□□ -0.48
Gm28395-201ENSMUST00000187794 Abcc8B2RUS7 1588 aa12.06□□□□□ -0.48
Gm28395-201ENSMUST00000187794 Znf219Q6IQX8 726 aa12.04□□□□□ -0.48
Gm28395-201ENSMUST00000187794 Csrnp3P59055 597 aa12.01□□□□□ -0.49
Gm28395-201ENSMUST00000187794 Aplp2Q06335 707 aa11.99□□□□□ -0.49
Gm28395-201ENSMUST00000187794 Bcl11aQ9QYE3 773 aa11.95□□□□□ -0.5
Gm28395-201ENSMUST00000187794 CatipB9EKE5 520 aa11.92□□□□□ -0.5
Gm28395-201ENSMUST00000187794 Cngb1E1AZ71 1325 aa11.92□□□□□ -0.5
Gm28395-201ENSMUST00000187794 Chrna2Q91X60 512 aa11.92□□□□□ -0.5
Gm28395-201ENSMUST00000187794 Sall2Q9QX96 1004 aa11.83□□□□□ -0.52
Gm28395-201ENSMUST00000187794 Rsph4aQ8BYM7 716 aa11.82□□□□□ -0.52
Gm28395-201ENSMUST00000187794 Zeb1Q64318 1117 aa11.81□□□□□ -0.52
Gm28395-201ENSMUST00000187794 NefmP08553 848 aa11.79□□□□□ -0.52
Gm28395-201ENSMUST00000187794 Ttbk1Q6PCN3 1308 aa11.74□□□□□ -0.53
Gm28395-201ENSMUST00000187794 Slc4a1apE9PX68 744 aa11.72□□□□□ -0.53
Gm28395-201ENSMUST00000187794 Atf5O70191 283 aa11.72□□□□□ -0.53
Gm28395-201ENSMUST00000187794 Rimbp2Q80U40 1072 aa11.69□□□□□ -0.54
Gm28395-201ENSMUST00000187794 Cep164Q5DU05 1446 aa11.68□□□□□ -0.54
Gm28395-201ENSMUST00000187794 Cdk11bP24788 784 aaKnown RBP11.65□□□□□ -0.54
Gm28395-201ENSMUST00000187794 PrkcshO08795 521 aa11.59□□□□□ -0.55
Gm28395-201ENSMUST00000187794 Nop58Q6DFW4 536 aaKnown RBP11.58□□□□□ -0.56
Gm28395-201ENSMUST00000187794 Gm38655A0A286YDK6 273 aa11.55□□□□□ -0.56
Gm28395-201ENSMUST00000187794 ArsiQ32KI9 573 aa11.53□□□□□ -0.56
Gm28395-201ENSMUST00000187794 Ppp4r2Q0VGB7 417 aa11.52□□□□□ -0.56
Gm28395-201ENSMUST00000187794 Mier1Q5UAK0 511 aa11.51□□□□□ -0.57
Gm28395-201ENSMUST00000187794 Amer1Q7TS75 1132 aa11.51□□□□□ -0.57
Gm28395-201ENSMUST00000187794 ClspnQ80YR7 1315 aa11.51□□□□□ -0.57
Gm28395-201ENSMUST00000187794 Fam71e1A1L3C1 212 aa11.51□□□□□ -0.57
Gm28395-201ENSMUST00000187794 Dnajc5bQ9CQ94 199 aa11.51□□□□□ -0.57
Gm28395-201ENSMUST00000187794 Hs6st3Q9QYK4 470 aa11.48□□□□□ -0.57
Gm28395-201ENSMUST00000187794 Wdr66E9Q743 1299 aa11.44□□□□□ -0.58
Gm28395-201ENSMUST00000187794 Aebp2Q9Z248 504 aaKnown RBP11.42□□□□□ -0.58
Gm28395-201ENSMUST00000187794 Ifnlr1Q8CGK5 535 aa11.4□□□□□ -0.58
Gm28395-201ENSMUST00000187794 Rb1cc1Q9ESK9 1588 aa11.39□□□□□ -0.59
Gm28395-201ENSMUST00000187794 Akt1s1Q9D1F4 257 aa11.38□□□□□ -0.59
Gm28395-201ENSMUST00000187794 Ccdc136Q3TVA9 1136 aa11.35□□□□□ -0.59
Gm28395-201ENSMUST00000187794 Rtl5Q5DTT4 599 aa11.35□□□□□ -0.59
Gm28395-201ENSMUST00000187794 Tnnt3Q9QZ47 272 aa11.34□□□□□ -0.59
Gm28395-201ENSMUST00000187794 ArxO35085 564 aa11.31□□□□□ -0.6
Gm28395-201ENSMUST00000187794 Baz1aO88379 1555 aa11.28□□□□□ -0.6
Gm28395-201ENSMUST00000187794 SafbD3YXK2 937 aaKnown RBP11.27□□□□□ -0.61
Gm28395-201ENSMUST00000187794 Hnrnpul2Q00PI9 745 aaKnown RBP11.26□□□□□ -0.61
Gm28395-201ENSMUST00000187794 Anp32aO35381 247 aa11.24□□□□□ -0.61
Gm28395-201ENSMUST00000187794 Rsf1E9PWW9 1441 aaKnown RBP11.2□□□□□ -0.62
Gm28395-201ENSMUST00000187794 Pelp1Q9DBD5 1123 aaKnown RBP11.19□□□□□ -0.62
Gm28395-201ENSMUST00000187794 Hdac5Q9Z2V6 1113 aa11.18□□□□□ -0.62
Gm28395-201ENSMUST00000187794 Bach1P97302 739 aa11.17□□□□□ -0.62
Gm28395-201ENSMUST00000187794 Slc34a2Q9DBP0 697 aa11.14□□□□□ -0.63
Gm28395-201ENSMUST00000187794 TonslQ6NZL6 1363 aa11.14□□□□□ -0.63
Gm28395-201ENSMUST00000187794 Smarca2Q6DIC0 1577 aa11.11□□□□□ -0.63
Gm28395-201ENSMUST00000187794 Fgd1P52734 960 aa11.1□□□□□ -0.63
Gm28395-201ENSMUST00000187794 NrdcQ8BHG1 1161 aa11.07□□□□□ -0.64
Gm28395-201ENSMUST00000187794 Pknox2Q8BG99 474 aa11.03□□□□□ -0.64
Gm28395-201ENSMUST00000187794 Nolc1E9Q5C9 702 aaKnown RBP11.01□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Ccdc88bQ4QRL3 1481 aa11.01□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Znf710Q3U288 666 aa11.01□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Supt16hQ920B9 1047 aa11.01□□□□□ -0.65
Gm28395-201ENSMUST00000187794 NacadQ5SWP3 1504 aa11□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Gtf3c3Q3TMP1 882 aa10.99□□□□□ -0.65
Gm28395-201ENSMUST00000187794 UbtfP25976 765 aaKnown RBP10.98□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Upf2A2AT37 1269 aaKnown RBP10.97□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Ccdc9Q8VC31 543 aaKnown RBP10.97□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Ap3b1Q9Z1T1 1105 aa10.97□□□□□ -0.65
Gm28395-201ENSMUST00000187794 ScribQ80U72 1612 aa10.97□□□□□ -0.65
Gm28395-201ENSMUST00000187794 Stra8P70278 393 aa10.96□□□□□ -0.66
Gm28395-201ENSMUST00000187794 Calr4Q3TQS0 420 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms