RNA–Protein interactions for RNA: ENSMUST00000187496.1

Gm28824-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28824, Length 2,167 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28824-201ENSMUST00000187496 Chic1Q8CBW7 227 aa17.25■□□□□ 0.35
Gm28824-201ENSMUST00000187496 Mapk8ip2Q9ERE9 830 aa16.91■□□□□ 0.3
Gm28824-201ENSMUST00000187496 Phf23Q8BSN5 401 aa15.63■□□□□ 0.09
Gm28824-201ENSMUST00000187496 Plppr3Q7TPB0 716 aa14.95□□□□□ -0.02
Gm28824-201ENSMUST00000187496 Gab3Q8BSM5 595 aa14.84□□□□□ -0.03
Gm28824-201ENSMUST00000187496 Rpgrip1Q9EPQ2 1331 aa14.38□□□□□ -0.11
Gm28824-201ENSMUST00000187496 Senp3Q9EP97 568 aaKnown RBP14.27□□□□□ -0.13
Gm28824-201ENSMUST00000187496 Rtl1Q7M732 1744 aa14.12□□□□□ -0.15
Gm28824-201ENSMUST00000187496 NischQ80TM9 1593 aa13.98□□□□□ -0.17
Gm28824-201ENSMUST00000187496 Ccdc180J3QNE4 1664 aa13.91□□□□□ -0.18
Gm28824-201ENSMUST00000187496 Kcna4Q61423 654 aa13.73□□□□□ -0.21
Gm28824-201ENSMUST00000187496 Acin1Q9JIX8 1338 aaKnown RBP13.7□□□□□ -0.22
Gm28824-201ENSMUST00000187496 Abcc9P70170 1546 aa13.64□□□□□ -0.23
Gm28824-201ENSMUST00000187496 Gm35339A0A140LHH9 1649 aa13.54□□□□□ -0.24
Gm28824-201ENSMUST00000187496 Rhox8Q6VSS7 320 aa13.46□□□□□ -0.25
Gm28824-201ENSMUST00000187496 Pcgf6Q99NA9 353 aa13.44□□□□□ -0.26
Gm28824-201ENSMUST00000187496 Dcaf1Q80TR8 1506 aa13.28□□□□□ -0.28
Gm28824-201ENSMUST00000187496 Zcchc6Q5BLK4 1491 aaKnown RBP13.23□□□□□ -0.29
Gm28824-201ENSMUST00000187496 Las1lA2BE28 776 aaKnown RBP13.13□□□□□ -0.31
Gm28824-201ENSMUST00000187496 Abcc8B2RUS7 1588 aa13.11□□□□□ -0.31
Gm28824-201ENSMUST00000187496 HrcG5E8J6 738 aa13.08□□□□□ -0.32
Gm28824-201ENSMUST00000187496 Trim41Q5NCC3 630 aa13.08□□□□□ -0.32
Gm28824-201ENSMUST00000187496 Ehmt2Q9Z148 1263 aaKnown RBP13.01□□□□□ -0.33
Gm28824-201ENSMUST00000187496 Myt1Q8CFC2 1127 aa12.96□□□□□ -0.33
Gm28824-201ENSMUST00000187496 Supt5hO55201 1082 aaKnown RBP12.96□□□□□ -0.34
Gm28824-201ENSMUST00000187496 Neurod1Q60867 357 aa12.94□□□□□ -0.34
Gm28824-201ENSMUST00000187496 CenpbP27790 599 aa12.76□□□□□ -0.37
Gm28824-201ENSMUST00000187496 Cngb1E1AZ71 1325 aa12.69□□□□□ -0.38
Gm28824-201ENSMUST00000187496 1700123L14RikQ3V2K7 440 aa12.68□□□□□ -0.38
Gm28824-201ENSMUST00000187496 Anks4bQ8K3X6 423 aa12.67□□□□□ -0.38
Gm28824-201ENSMUST00000187496 NefmP08553 848 aa12.61□□□□□ -0.39
Gm28824-201ENSMUST00000187496 Hoxd11P23813 323 aa12.57□□□□□ -0.4
Gm28824-201ENSMUST00000187496 Aplp2Q06335 707 aa12.56□□□□□ -0.4
Gm28824-201ENSMUST00000187496 Zeb1Q64318 1117 aa12.51□□□□□ -0.41
Gm28824-201ENSMUST00000187496 Fam163aQ8CAA5 168 aa12.51□□□□□ -0.41
Gm28824-201ENSMUST00000187496 Cep164Q5DU05 1446 aa12.51□□□□□ -0.41
Gm28824-201ENSMUST00000187496 Csrnp3P59055 597 aa12.5□□□□□ -0.41
Gm28824-201ENSMUST00000187496 Trap1aP19473 224 aa12.49□□□□□ -0.41
Gm28824-201ENSMUST00000187496 DiexfQ8BTT6 772 aaKnown RBP12.45□□□□□ -0.42
Gm28824-201ENSMUST00000187496 Sall2Q9QX96 1004 aa12.45□□□□□ -0.42
Gm28824-201ENSMUST00000187496 Ccdc136Q3TVA9 1136 aa12.36□□□□□ -0.43
Gm28824-201ENSMUST00000187496 Cdk11bP24788 784 aaKnown RBP12.33□□□□□ -0.44
Gm28824-201ENSMUST00000187496 Rb1cc1Q9ESK9 1588 aa12.31□□□□□ -0.44
Gm28824-201ENSMUST00000187496 Mier1Q5UAK0 511 aa12.27□□□□□ -0.45
Gm28824-201ENSMUST00000187496 Nop58Q6DFW4 536 aaKnown RBP12.26□□□□□ -0.45
Gm28824-201ENSMUST00000187496 Bcl11aQ9QYE3 773 aa12.25□□□□□ -0.45
Gm28824-201ENSMUST00000187496 Dmrt2Q8BG36 561 aa12.22□□□□□ -0.45
Gm28824-201ENSMUST00000187496 Baz1aO88379 1555 aa12.21□□□□□ -0.45
Gm28824-201ENSMUST00000187496 ClspnQ80YR7 1315 aa12.21□□□□□ -0.46
Gm28824-201ENSMUST00000187496 Wdr66E9Q743 1299 aa12.15□□□□□ -0.46
Gm28824-201ENSMUST00000187496 Aebp2Q9Z248 504 aaKnown RBP12.06□□□□□ -0.48
Gm28824-201ENSMUST00000187496 Tnnt3Q9QZ47 272 aa12.05□□□□□ -0.48
Gm28824-201ENSMUST00000187496 Znf219Q6IQX8 726 aa12.02□□□□□ -0.49
Gm28824-201ENSMUST00000187496 Ppargc1bQ8VHJ7 1014 aa12.02□□□□□ -0.49
Gm28824-201ENSMUST00000187496 Rsf1E9PWW9 1441 aaKnown RBP12.01□□□□□ -0.49
Gm28824-201ENSMUST00000187496 Fam71e1A1L3C1 212 aa12□□□□□ -0.49
Gm28824-201ENSMUST00000187496 Gm38655A0A286YDK6 273 aa11.99□□□□□ -0.49
Gm28824-201ENSMUST00000187496 Smarca2Q6DIC0 1577 aa11.99□□□□□ -0.49
Gm28824-201ENSMUST00000187496 Rtl5Q5DTT4 599 aa11.98□□□□□ -0.49
Gm28824-201ENSMUST00000187496 Crybg2B7ZCC2 1516 aa11.91□□□□□ -0.5
Gm28824-201ENSMUST00000187496 TonslQ6NZL6 1363 aa11.9□□□□□ -0.5
Gm28824-201ENSMUST00000187496 ScribQ80U72 1612 aa11.89□□□□□ -0.51
Gm28824-201ENSMUST00000187496 Anp32aO35381 247 aa11.86□□□□□ -0.51
Gm28824-201ENSMUST00000187496 Pelp1Q9DBD5 1123 aaKnown RBP11.86□□□□□ -0.51
Gm28824-201ENSMUST00000187496 Chrna2Q91X60 512 aa11.84□□□□□ -0.51
Gm28824-201ENSMUST00000187496 Kdm5dQ62240 1548 aa11.83□□□□□ -0.52
Gm28824-201ENSMUST00000187496 Hnrnpul2Q00PI9 745 aaKnown RBP11.82□□□□□ -0.52
Gm28824-201ENSMUST00000187496 UbtfP25976 765 aaKnown RBP11.81□□□□□ -0.52
Gm28824-201ENSMUST00000187496 Ccdc88bQ4QRL3 1481 aa11.81□□□□□ -0.52
Gm28824-201ENSMUST00000187496 PrkcshO08795 521 aa11.81□□□□□ -0.52
Gm28824-201ENSMUST00000187496 Amer1Q7TS75 1132 aa11.81□□□□□ -0.52
Gm28824-201ENSMUST00000187496 Golga3P55937 1487 aa11.79□□□□□ -0.52
Gm28824-201ENSMUST00000187496 SafbD3YXK2 937 aaKnown RBP11.78□□□□□ -0.52
Gm28824-201ENSMUST00000187496 Brd4Q9ESU6 1400 aaKnown RBP11.75□□□□□ -0.53
Gm28824-201ENSMUST00000187496 Stra8P70278 393 aa11.75□□□□□ -0.53
Gm28824-201ENSMUST00000187496 Rsph4aQ8BYM7 716 aa11.74□□□□□ -0.53
Gm28824-201ENSMUST00000187496 Atf5O70191 283 aa11.72□□□□□ -0.53
Gm28824-201ENSMUST00000187496 NacadQ5SWP3 1504 aa11.69□□□□□ -0.54
Gm28824-201ENSMUST00000187496 Ifnlr1Q8CGK5 535 aa11.68□□□□□ -0.54
Gm28824-201ENSMUST00000187496 Rimbp2Q80U40 1072 aa11.67□□□□□ -0.54
Gm28824-201ENSMUST00000187496 Rapgef2Q8CHG7 1496 aa11.64□□□□□ -0.55
Gm28824-201ENSMUST00000187496 Znf710Q3U288 666 aa11.62□□□□□ -0.55
Gm28824-201ENSMUST00000187496 Ncapd3Q6ZQK0 1506 aa11.6□□□□□ -0.55
Gm28824-201ENSMUST00000187496 Top2bQ64511 1612 aa11.6□□□□□ -0.55
Gm28824-201ENSMUST00000187496 Slc4a1apE9PX68 744 aa11.58□□□□□ -0.56
Gm28824-201ENSMUST00000187496 Calr4Q3TQS0 420 aa11.57□□□□□ -0.56
Gm28824-201ENSMUST00000187496 Ap3b1Q9Z1T1 1105 aa11.57□□□□□ -0.56
Gm28824-201ENSMUST00000187496 Ccdc9Q8VC31 543 aaKnown RBP11.56□□□□□ -0.56
Gm28824-201ENSMUST00000187496 Nolc1E9Q5C9 702 aaKnown RBP11.54□□□□□ -0.56
Gm28824-201ENSMUST00000187496 Supt16hQ920B9 1047 aa11.54□□□□□ -0.56
Gm28824-201ENSMUST00000187496 Hdac5Q9Z2V6 1113 aa11.54□□□□□ -0.56
Gm28824-201ENSMUST00000187496 Synj1Q8CHC4 1574 aa11.52□□□□□ -0.57
Gm28824-201ENSMUST00000187496 Cep162Q6ZQ06 1403 aa11.51□□□□□ -0.57
Gm28824-201ENSMUST00000187496 Dnajc5bQ9CQ94 199 aa11.51□□□□□ -0.57
Gm28824-201ENSMUST00000187496 Rpap1Q80TE0 1409 aa11.5□□□□□ -0.57
Gm28824-201ENSMUST00000187496 ArsiQ32KI9 573 aa11.48□□□□□ -0.57
Gm28824-201ENSMUST00000187496 Upf2A2AT37 1269 aaKnown RBP11.47□□□□□ -0.57
Gm28824-201ENSMUST00000187496 Ccdc27Q3V036 639 aa11.46□□□□□ -0.57
Gm28824-201ENSMUST00000187496 Kdm5bQ80Y84 1544 aa11.45□□□□□ -0.58
Gm28824-201ENSMUST00000187496 Top2aQ01320 1528 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 69.5 ms