RNA–Protein interactions for RNA: ENSMUST00000164052.4

Vps50-202, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 4,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-202ENSMUST00000164052 Rpgrip1Q9EPQ2 1331 aa9.76□□□□□ -0.85
Vps50-202ENSMUST00000164052 Acin1Q9JIX8 1338 aaKnown RBP9.2□□□□□ -0.94
Vps50-202ENSMUST00000164052 Las1lA2BE28 776 aaKnown RBP9.1□□□□□ -0.95
Vps50-202ENSMUST00000164052 Pcgf6Q99NA9 353 aa9.1□□□□□ -0.95
Vps50-202ENSMUST00000164052 Myt1Q8CFC2 1127 aa8.98□□□□□ -0.97
Vps50-202ENSMUST00000164052 Rtl1Q7M732 1744 aa8.97□□□□□ -0.97
Vps50-202ENSMUST00000164052 Ccdc180J3QNE4 1664 aa8.96□□□□□ -0.97
Vps50-202ENSMUST00000164052 Rhox8Q6VSS7 320 aa8.94□□□□□ -0.98
Vps50-202ENSMUST00000164052 CenpbP27790 599 aa8.85□□□□□ -0.99
Vps50-202ENSMUST00000164052 Ehmt2Q9Z148 1263 aaKnown RBP8.83□□□□□ -1
Vps50-202ENSMUST00000164052 Neurod1Q60867 357 aa8.77□□□□□ -1.01
Vps50-202ENSMUST00000164052 Supt5hO55201 1082 aaKnown RBP8.75□□□□□ -1.01
Vps50-202ENSMUST00000164052 DiexfQ8BTT6 772 aaKnown RBP8.75□□□□□ -1.01
Vps50-202ENSMUST00000164052 NischQ80TM9 1593 aa8.73□□□□□ -1.01
Vps50-202ENSMUST00000164052 Trim41Q5NCC3 630 aa8.68□□□□□ -1.02
Vps50-202ENSMUST00000164052 Dcaf1Q80TR8 1506 aa8.67□□□□□ -1.02
Vps50-202ENSMUST00000164052 Cngb1E1AZ71 1325 aa8.65□□□□□ -1.03
Vps50-202ENSMUST00000164052 1700123L14RikQ3V2K7 440 aa8.62□□□□□ -1.03
Vps50-202ENSMUST00000164052 Anks4bQ8K3X6 423 aa8.57□□□□□ -1.04
Vps50-202ENSMUST00000164052 HrcG5E8J6 738 aa8.56□□□□□ -1.04
Vps50-202ENSMUST00000164052 Aplp2Q06335 707 aa8.54□□□□□ -1.04
Vps50-202ENSMUST00000164052 Zeb1Q64318 1117 aa8.52□□□□□ -1.05
Vps50-202ENSMUST00000164052 Abcc9P70170 1546 aa8.51□□□□□ -1.05
Vps50-202ENSMUST00000164052 Csrnp3P59055 597 aa8.51□□□□□ -1.05
Vps50-202ENSMUST00000164052 Chic1Q8CBW7 227 aa8.5□□□□□ -1.05
Vps50-202ENSMUST00000164052 Bcl11aQ9QYE3 773 aa8.49□□□□□ -1.05
Vps50-202ENSMUST00000164052 NefmP08553 848 aa8.47□□□□□ -1.05
Vps50-202ENSMUST00000164052 Amer1Q7TS75 1132 aa8.42□□□□□ -1.06
Vps50-202ENSMUST00000164052 Cdk11bP24788 784 aaKnown RBP8.39□□□□□ -1.07
Vps50-202ENSMUST00000164052 Zcchc6Q5BLK4 1491 aaKnown RBP8.38□□□□□ -1.07
Vps50-202ENSMUST00000164052 Sall2Q9QX96 1004 aa8.36□□□□□ -1.07
Vps50-202ENSMUST00000164052 Nop58Q6DFW4 536 aaKnown RBP8.32□□□□□ -1.08
Vps50-202ENSMUST00000164052 Wdr66E9Q743 1299 aa8.32□□□□□ -1.08
Vps50-202ENSMUST00000164052 Pelp1Q9DBD5 1123 aaKnown RBP8.27□□□□□ -1.09
Vps50-202ENSMUST00000164052 Rtl5Q5DTT4 599 aa8.23□□□□□ -1.09
Vps50-202ENSMUST00000164052 Gm38655A0A286YDK6 273 aa8.22□□□□□ -1.09
Vps50-202ENSMUST00000164052 Tnnt3Q9QZ47 272 aa8.2□□□□□ -1.1
Vps50-202ENSMUST00000164052 PrkcshO08795 521 aa8.19□□□□□ -1.1
Vps50-202ENSMUST00000164052 Esf1Q3V1V3 845 aaKnown RBP8.19□□□□□ -1.1
Vps50-202ENSMUST00000164052 ClspnQ80YR7 1315 aa8.19□□□□□ -1.1
Vps50-202ENSMUST00000164052 Fam71e1A1L3C1 212 aa8.18□□□□□ -1.1
Vps50-202ENSMUST00000164052 Mier1Q5UAK0 511 aa8.17□□□□□ -1.1
Vps50-202ENSMUST00000164052 Gm35339A0A140LHH9 1649 aa8.16□□□□□ -1.1
Vps50-202ENSMUST00000164052 Ccdc136Q3TVA9 1136 aa8.14□□□□□ -1.11
Vps50-202ENSMUST00000164052 Abcc8B2RUS7 1588 aa8.1□□□□□ -1.11
Vps50-202ENSMUST00000164052 Anp32aO35381 247 aa8.1□□□□□ -1.11
Vps50-202ENSMUST00000164052 Cep164Q5DU05 1446 aa8.08□□□□□ -1.12
Vps50-202ENSMUST00000164052 Plppr3Q7TPB0 716 aa8.06□□□□□ -1.12
Vps50-202ENSMUST00000164052 Ube2uB1AUC4 352 aa8.05□□□□□ -1.12
Vps50-202ENSMUST00000164052 Mapk8ip2Q9ERE9 830 aa8.04□□□□□ -1.12
Vps50-202ENSMUST00000164052 Aebp2Q9Z248 504 aaKnown RBP8.04□□□□□ -1.12
Vps50-202ENSMUST00000164052 Ifnlr1Q8CGK5 535 aa8.01□□□□□ -1.13
Vps50-202ENSMUST00000164052 Stra8P70278 393 aa7.99□□□□□ -1.13
Vps50-202ENSMUST00000164052 Ppargc1bQ8VHJ7 1014 aa7.98□□□□□ -1.13
Vps50-202ENSMUST00000164052 NacadQ5SWP3 1504 aa7.98□□□□□ -1.13
Vps50-202ENSMUST00000164052 SafbD3YXK2 937 aaKnown RBP7.96□□□□□ -1.13
Vps50-202ENSMUST00000164052 Hnrnpul2Q00PI9 745 aaKnown RBP7.96□□□□□ -1.14
Vps50-202ENSMUST00000164052 Gab3Q8BSM5 595 aa7.96□□□□□ -1.14
Vps50-202ENSMUST00000164052 TonslQ6NZL6 1363 aa7.96□□□□□ -1.14
Vps50-202ENSMUST00000164052 Ccdc9Q8VC31 543 aaKnown RBP7.94□□□□□ -1.14
Vps50-202ENSMUST00000164052 Hdac5Q9Z2V6 1113 aa7.94□□□□□ -1.14
Vps50-202ENSMUST00000164052 Ttbk1Q6PCN3 1308 aa7.94□□□□□ -1.14
Vps50-202ENSMUST00000164052 UbtfP25976 765 aaKnown RBP7.91□□□□□ -1.14
Vps50-202ENSMUST00000164052 Pknox2Q8BG99 474 aa7.89□□□□□ -1.15
Vps50-202ENSMUST00000164052 Ercc6F8VPZ5 1481 aa7.89□□□□□ -1.15
Vps50-202ENSMUST00000164052 NrdcQ8BHG1 1161 aa7.89□□□□□ -1.15
Vps50-202ENSMUST00000164052 Npm1Q61937 292 aaKnown RBP7.87□□□□□ -1.15
Vps50-202ENSMUST00000164052 Pds5bQ4VA53 1446 aaKnown RBP7.86□□□□□ -1.15
Vps50-202ENSMUST00000164052 Fgd1P52734 960 aa7.85□□□□□ -1.15
Vps50-202ENSMUST00000164052 Gtf3c3Q3TMP1 882 aa7.84□□□□□ -1.15
Vps50-202ENSMUST00000164052 Upf2A2AT37 1269 aaKnown RBP7.84□□□□□ -1.15
Vps50-202ENSMUST00000164052 Ubl4bQ9CQ84 188 aa7.84□□□□□ -1.15
Vps50-202ENSMUST00000164052 Calr4Q3TQS0 420 aa7.84□□□□□ -1.15
Vps50-202ENSMUST00000164052 Irx3P81067 507 aa7.83□□□□□ -1.16
Vps50-202ENSMUST00000164052 Ccdc27Q3V036 639 aa7.83□□□□□ -1.16
Vps50-202ENSMUST00000164052 Ap3b1Q9Z1T1 1105 aa7.82□□□□□ -1.16
Vps50-202ENSMUST00000164052 Supt16hQ920B9 1047 aa7.81□□□□□ -1.16
Vps50-202ENSMUST00000164052 Nolc1E9Q5C9 702 aaKnown RBP7.78□□□□□ -1.16
Vps50-202ENSMUST00000164052 Hsp90aa1P07901 733 aaKnown RBP7.77□□□□□ -1.16
Vps50-202ENSMUST00000164052 4933416C03RikQ3V063 378 aa7.76□□□□□ -1.17
Vps50-202ENSMUST00000164052 Wdr43Q6ZQL4 677 aaKnown RBP7.75□□□□□ -1.17
Vps50-202ENSMUST00000164052 Plcd4Q8K3R3 807 aa7.74□□□□□ -1.17
Vps50-202ENSMUST00000164052 Ppp4r2Q0VGB7 417 aa7.74□□□□□ -1.17
Vps50-202ENSMUST00000164052 Npm2Q80W85 207 aa7.72□□□□□ -1.17
Vps50-202ENSMUST00000164052 Rb1cc1Q9ESK9 1588 aa7.72□□□□□ -1.17
Vps50-202ENSMUST00000164052 Il27Q8K3I6 234 aa7.72□□□□□ -1.17
Vps50-202ENSMUST00000164052 Rsf1E9PWW9 1441 aaKnown RBP7.7□□□□□ -1.18
Vps50-202ENSMUST00000164052 Znf710Q3U288 666 aa7.7□□□□□ -1.18
Vps50-202ENSMUST00000164052 Kcna4Q61423 654 aa7.7□□□□□ -1.18
Vps50-202ENSMUST00000164052 Ipo4Q8VI75 1082 aa7.69□□□□□ -1.18
Vps50-202ENSMUST00000164052 Myt1lP97500 1187 aa7.67□□□□□ -1.18
Vps50-202ENSMUST00000164052 DaxxO35613 739 aa7.65□□□□□ -1.18
Vps50-202ENSMUST00000164052 NeflP08551 543 aa7.64□□□□□ -1.19
Vps50-202ENSMUST00000164052 Slc24a1Q91WD8 1130 aa7.63□□□□□ -1.19
Vps50-202ENSMUST00000164052 Ipo9Q91YE6 1041 aa7.63□□□□□ -1.19
Vps50-202ENSMUST00000164052 Baz1aO88379 1555 aa7.62□□□□□ -1.19
Vps50-202ENSMUST00000164052 Eif5bQ05D44 1216 aaKnown RBP7.62□□□□□ -1.19
Vps50-202ENSMUST00000164052 Kdm5dQ62240 1548 aa7.61□□□□□ -1.19
Vps50-202ENSMUST00000164052 NclP09405 707 aaKnown RBP7.61□□□□□ -1.19
Vps50-202ENSMUST00000164052 Washc2Q6PGL7 1334 aa7.6□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms