RNA–Protein interactions for RNA: ENSMUST00000130044.1

Synpo-205, Transcript of Synaptopodin, mousemouse

APPRIS P3 TSL 2 BASIC

Gene Synpo, Length 4,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-205ENSMUST00000130044 Rhox8Q6VSS7 320 aa29.56■■■□□ 2.32
Synpo-205ENSMUST00000130044 Rpgrip1Q9EPQ2 1331 aa27.68■■■□□ 2.02
Synpo-205ENSMUST00000130044 NischQ80TM9 1593 aa27.55■■■□□ 2
Synpo-205ENSMUST00000130044 Ehmt2Q9Z148 1263 aaKnown RBP26.47■■□□□ 1.83
Synpo-205ENSMUST00000130044 Ccdc136Q3TVA9 1136 aa26.47■■□□□ 1.83
Synpo-205ENSMUST00000130044 Trim41Q5NCC3 630 aa26.2■■□□□ 1.78
Synpo-205ENSMUST00000130044 Ccdc180J3QNE4 1664 aa26.16■■□□□ 1.78
Synpo-205ENSMUST00000130044 Rtl1Q7M732 1744 aa26.14■■□□□ 1.77
Synpo-205ENSMUST00000130044 Abcc9P70170 1546 aa26.03■■□□□ 1.76
Synpo-205ENSMUST00000130044 Cngb1E1AZ71 1325 aa26.01■■□□□ 1.75
Synpo-205ENSMUST00000130044 Esf1Q3V1V3 845 aaKnown RBP25.91■■□□□ 1.74
Synpo-205ENSMUST00000130044 Acin1Q9JIX8 1338 aaKnown RBP25.89■■□□□ 1.73
Synpo-205ENSMUST00000130044 Las1lA2BE28 776 aaKnown RBP25.87■■□□□ 1.73
Synpo-205ENSMUST00000130044 HrcG5E8J6 738 aa25.72■■□□□ 1.71
Synpo-205ENSMUST00000130044 Gab3Q8BSM5 595 aa25.7■■□□□ 1.7
Synpo-205ENSMUST00000130044 Wdr66E9Q743 1299 aa25.55■■□□□ 1.68
Synpo-205ENSMUST00000130044 Zeb1Q64318 1117 aa25.52■■□□□ 1.68
Synpo-205ENSMUST00000130044 NefmP08553 848 aa25.37■■□□□ 1.65
Synpo-205ENSMUST00000130044 Abcc8B2RUS7 1588 aa25.36■■□□□ 1.65
Synpo-205ENSMUST00000130044 Npm2Q80W85 207 aa25.33■■□□□ 1.64
Synpo-205ENSMUST00000130044 Myt1lP97500 1187 aa25.13■■□□□ 1.61
Synpo-205ENSMUST00000130044 Zcchc6Q5BLK4 1491 aaKnown RBP24.97■■□□□ 1.59
Synpo-205ENSMUST00000130044 Ube2uB1AUC4 352 aa24.92■■□□□ 1.58
Synpo-205ENSMUST00000130044 UbtfP25976 765 aaKnown RBP24.88■■□□□ 1.57
Synpo-205ENSMUST00000130044 Gm35339A0A140LHH9 1649 aa24.88■■□□□ 1.57
Synpo-205ENSMUST00000130044 Pelp1Q9DBD5 1123 aaKnown RBP24.87■■□□□ 1.57
Synpo-205ENSMUST00000130044 Pcgf6Q99NA9 353 aa24.85■■□□□ 1.57
Synpo-205ENSMUST00000130044 CenpbP27790 599 aa24.67■■□□□ 1.54
Synpo-205ENSMUST00000130044 Stra8P70278 393 aa24.59■■□□□ 1.53
Synpo-205ENSMUST00000130044 Cdk11bP24788 784 aaKnown RBP24.45■■□□□ 1.51
Synpo-205ENSMUST00000130044 Dcaf1Q80TR8 1506 aa24.39■■□□□ 1.5
Synpo-205ENSMUST00000130044 Supt5hO55201 1082 aaKnown RBP24.33■■□□□ 1.49
Synpo-205ENSMUST00000130044 Il27Q8K3I6 234 aa24.25■■□□□ 1.47
Synpo-205ENSMUST00000130044 Rb1cc1Q9ESK9 1588 aa24.23■■□□□ 1.47
Synpo-205ENSMUST00000130044 Mier1Q5UAK0 511 aa24.22■■□□□ 1.47
Synpo-205ENSMUST00000130044 Nop58Q6DFW4 536 aaKnown RBP24.22■■□□□ 1.47
Synpo-205ENSMUST00000130044 Cep164Q5DU05 1446 aa24.22■■□□□ 1.47
Synpo-205ENSMUST00000130044 Brd4Q9ESU6 1400 aaKnown RBP24.15■■□□□ 1.46
Synpo-205ENSMUST00000130044 Tnnt3Q9QZ47 272 aa24.13■■□□□ 1.45
Synpo-205ENSMUST00000130044 TonslQ6NZL6 1363 aa24.13■■□□□ 1.45
Synpo-205ENSMUST00000130044 Myt1Q8CFC2 1127 aa24.07■■□□□ 1.44
Synpo-205ENSMUST00000130044 Fam50aQ9WV03 339 aaKnown RBP23.99■■□□□ 1.43
Synpo-205ENSMUST00000130044 Ap3b1Q9Z1T1 1105 aa23.97■■□□□ 1.43
Synpo-205ENSMUST00000130044 NclP09405 707 aaKnown RBP23.94■■□□□ 1.42
Synpo-205ENSMUST00000130044 Slc24a1Q91WD8 1130 aa23.93■■□□□ 1.42
Synpo-205ENSMUST00000130044 ClspnQ80YR7 1315 aa23.87■■□□□ 1.41
Synpo-205ENSMUST00000130044 Baz1aO88379 1555 aa23.81■■□□□ 1.4
Synpo-205ENSMUST00000130044 Chic1Q8CBW7 227 aa23.79■■□□□ 1.4
Synpo-205ENSMUST00000130044 NacadQ5SWP3 1504 aa23.78■■□□□ 1.4
Synpo-205ENSMUST00000130044 NrdcQ8BHG1 1161 aa23.76■■□□□ 1.39
Synpo-205ENSMUST00000130044 Ppargc1bQ8VHJ7 1014 aa23.73■■□□□ 1.39
Synpo-205ENSMUST00000130044 Plekhg3Q4VAC9 1341 aa23.68■■□□□ 1.38
Synpo-205ENSMUST00000130044 Anp32bQ9EST5 272 aaKnown RBP23.68■■□□□ 1.38
Synpo-205ENSMUST00000130044 Clip1Q922J3 1391 aa23.58■■□□□ 1.37
Synpo-205ENSMUST00000130044 Neurod1Q60867 357 aa23.56■■□□□ 1.36
Synpo-205ENSMUST00000130044 Npm1Q61937 292 aaKnown RBP23.55■■□□□ 1.36
Synpo-205ENSMUST00000130044 Sall2Q9QX96 1004 aa23.54■■□□□ 1.36
Synpo-205ENSMUST00000130044 Anks4bQ8K3X6 423 aa23.48■■□□□ 1.35
Synpo-205ENSMUST00000130044 Golga3P55937 1487 aa23.44■■□□□ 1.34
Synpo-205ENSMUST00000130044 Rtl5Q5DTT4 599 aa23.44■■□□□ 1.34
Synpo-205ENSMUST00000130044 Lmod2Q3UHZ5 550 aa23.42■■□□□ 1.34
Synpo-205ENSMUST00000130044 NeflP08551 543 aa23.41■■□□□ 1.34
Synpo-205ENSMUST00000130044 Eif5bQ05D44 1216 aaKnown RBP23.39■■□□□ 1.34
Synpo-205ENSMUST00000130044 Ccer2J3QPU5 274 aa23.34■■□□□ 1.33
Synpo-205ENSMUST00000130044 Amer1Q7TS75 1132 aa23.33■■□□□ 1.33
Synpo-205ENSMUST00000130044 Kdm5dQ62240 1548 aa23.33■■□□□ 1.33
Synpo-205ENSMUST00000130044 Anp32aO35381 247 aa23.23■■□□□ 1.31
Synpo-205ENSMUST00000130044 Eid3Q3V124 375 aa23.23■■□□□ 1.31
Synpo-205ENSMUST00000130044 Aplp2Q06335 707 aa23.19■■□□□ 1.3
Synpo-205ENSMUST00000130044 Rsf1E9PWW9 1441 aaKnown RBP23.16■■□□□ 1.3
Synpo-205ENSMUST00000130044 Os9Q8K2C7 672 aa23.13■■□□□ 1.29
Synpo-205ENSMUST00000130044 Csrnp3P59055 597 aa23.09■■□□□ 1.29
Synpo-205ENSMUST00000130044 4933416C03RikQ3V063 378 aa23.04■■□□□ 1.28
Synpo-205ENSMUST00000130044 Ttbk1Q6PCN3 1308 aa23.02■■□□□ 1.28
Synpo-205ENSMUST00000130044 Setd5Q5XJV7 1441 aa23■■□□□ 1.27
Synpo-205ENSMUST00000130044 BlmO88700 1416 aa23■■□□□ 1.27
Synpo-205ENSMUST00000130044 Crybg2B7ZCC2 1516 aa22.98■■□□□ 1.27
Synpo-205ENSMUST00000130044 Mapk8ip2Q9ERE9 830 aa22.95■■□□□ 1.26
Synpo-205ENSMUST00000130044 Eea1Q8BL66 1411 aa22.9■■□□□ 1.26
Synpo-205ENSMUST00000130044 Hdac5Q9Z2V6 1113 aa22.88■■□□□ 1.25
Synpo-205ENSMUST00000130044 Ubl4bQ9CQ84 188 aa22.87■■□□□ 1.25
Synpo-205ENSMUST00000130044 Aebp2Q9Z248 504 aaKnown RBP22.84■■□□□ 1.25
Synpo-205ENSMUST00000130044 Ccdc88bQ4QRL3 1481 aa22.8■■□□□ 1.24
Synpo-205ENSMUST00000130044 Calr4Q3TQS0 420 aa22.79■■□□□ 1.24
Synpo-205ENSMUST00000130044 Hnrnpul2Q00PI9 745 aaKnown RBP22.78■■□□□ 1.24
Synpo-205ENSMUST00000130044 Zbtb7cQ8VCZ7 619 aa22.78■■□□□ 1.24
Synpo-205ENSMUST00000130044 Kif15Q6P9L6 1387 aa22.77■■□□□ 1.24
Synpo-205ENSMUST00000130044 Gm38655A0A286YDK6 273 aa22.76■■□□□ 1.23
Synpo-205ENSMUST00000130044 Sycp2Q9CUU3 1500 aa22.73■■□□□ 1.23
Synpo-205ENSMUST00000130044 Fmn1Q05860 1466 aa22.73■■□□□ 1.23
Synpo-205ENSMUST00000130044 Ccdc18Q640L5 1455 aa22.71■■□□□ 1.23
Synpo-205ENSMUST00000130044 Smarca2Q6DIC0 1577 aa22.71■■□□□ 1.23
Synpo-205ENSMUST00000130044 Chic2Q9D9G3 165 aa22.69■■□□□ 1.22
Synpo-205ENSMUST00000130044 Cep162Q6ZQ06 1403 aa22.66■■□□□ 1.22
Synpo-205ENSMUST00000130044 Upf2A2AT37 1269 aaKnown RBP22.65■■□□□ 1.22
Synpo-205ENSMUST00000130044 Ercc6F8VPZ5 1481 aa22.63■■□□□ 1.21
Synpo-205ENSMUST00000130044 Mrs2Q5NCE8 434 aa22.62■■□□□ 1.21
Synpo-205ENSMUST00000130044 1700123L14RikQ3V2K7 440 aa22.61■■□□□ 1.21
Synpo-205ENSMUST00000130044 Nlrp6Q91WS2 869 aa22.59■■□□□ 1.21
Synpo-205ENSMUST00000130044 Clstn2Q9ER65 966 aa22.57■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms