RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Rhox8Q6VSS7 320 aa17.17■□□□□ 0.34
Smchd1-201ENSMUST00000127430 Amer1Q7TS75 1132 aa16.92■□□□□ 0.3
Smchd1-201ENSMUST00000127430 Ehmt2Q9Z148 1263 aaKnown RBP16.9■□□□□ 0.3
Smchd1-201ENSMUST00000127430 Rpgrip1Q9EPQ2 1331 aa16.73■□□□□ 0.27
Smchd1-201ENSMUST00000127430 Ttbk1Q6PCN3 1308 aa16.46■□□□□ 0.22
Smchd1-201ENSMUST00000127430 Las1lA2BE28 776 aaKnown RBP16.24■□□□□ 0.19
Smchd1-201ENSMUST00000127430 Cngb1E1AZ71 1325 aa16.14■□□□□ 0.18
Smchd1-201ENSMUST00000127430 Wdr66E9Q743 1299 aa16.06■□□□□ 0.16
Smchd1-201ENSMUST00000127430 Zeb1Q64318 1117 aa15.99■□□□□ 0.15
Smchd1-201ENSMUST00000127430 Pelp1Q9DBD5 1123 aaKnown RBP15.86■□□□□ 0.13
Smchd1-201ENSMUST00000127430 Myt1Q8CFC2 1127 aa15.79■□□□□ 0.12
Smchd1-201ENSMUST00000127430 4930567H17RikQ3V0K5 233 aa15.52■□□□□ 0.07
Smchd1-201ENSMUST00000127430 Slc24a1Q91WD8 1130 aa15.49■□□□□ 0.07
Smchd1-201ENSMUST00000127430 4933416C03RikQ3V063 378 aa15.48■□□□□ 0.07
Smchd1-201ENSMUST00000127430 CenpbP27790 599 aa15.48■□□□□ 0.07
Smchd1-201ENSMUST00000127430 DiexfQ8BTT6 772 aaKnown RBP15.4■□□□□ 0.06
Smchd1-201ENSMUST00000127430 Acin1Q9JIX8 1338 aaKnown RBP15.27■□□□□ 0.04
Smchd1-201ENSMUST00000127430 Ppargc1bQ8VHJ7 1014 aa15.22■□□□□ 0.03
Smchd1-201ENSMUST00000127430 Ube2uB1AUC4 352 aa15.19■□□□□ 0.02
Smchd1-201ENSMUST00000127430 Ccdc136Q3TVA9 1136 aa15.13■□□□□ 0.01
Smchd1-201ENSMUST00000127430 Gm38655A0A286YDK6 273 aa15.09■□□□□ 0.01
Smchd1-201ENSMUST00000127430 Ythdc1E9Q5K9 736 aaKnown RBP15.03■□□□□ -0
Smchd1-201ENSMUST00000127430 NefmP08553 848 aa15.02□□□□□ -0.01
Smchd1-201ENSMUST00000127430 Gab3Q8BSM5 595 aa15.01□□□□□ -0.01
Smchd1-201ENSMUST00000127430 Trim41Q5NCC3 630 aa14.93□□□□□ -0.02
Smchd1-201ENSMUST00000127430 Stra8P70278 393 aa14.93□□□□□ -0.02
Smchd1-201ENSMUST00000127430 Eif5bQ05D44 1216 aaKnown RBP14.91□□□□□ -0.02
Smchd1-201ENSMUST00000127430 Esf1Q3V1V3 845 aaKnown RBP14.91□□□□□ -0.02
Smchd1-201ENSMUST00000127430 Pcgf6Q99NA9 353 aa14.9□□□□□ -0.02
Smchd1-201ENSMUST00000127430 Lmod3E9QA62 571 aa14.82□□□□□ -0.04
Smchd1-201ENSMUST00000127430 Cdk11bP24788 784 aaKnown RBP14.81□□□□□ -0.04
Smchd1-201ENSMUST00000127430 Npm2Q80W85 207 aa14.76□□□□□ -0.05
Smchd1-201ENSMUST00000127430 Myt1lP97500 1187 aa14.7□□□□□ -0.06
Smchd1-201ENSMUST00000127430 ArxO35085 564 aa14.67□□□□□ -0.06
Smchd1-201ENSMUST00000127430 Tnnt3Q9QZ47 272 aa14.66□□□□□ -0.06
Smchd1-201ENSMUST00000127430 UbtfP25976 765 aaKnown RBP14.64□□□□□ -0.07
Smchd1-201ENSMUST00000127430 DaxxO35613 739 aa14.62□□□□□ -0.07
Smchd1-201ENSMUST00000127430 Nop58Q6DFW4 536 aaKnown RBP14.6□□□□□ -0.07
Smchd1-201ENSMUST00000127430 Rtl5Q5DTT4 599 aa14.57□□□□□ -0.08
Smchd1-201ENSMUST00000127430 CatipB9EKE5 520 aa14.52□□□□□ -0.08
Smchd1-201ENSMUST00000127430 HrcG5E8J6 738 aa14.51□□□□□ -0.09
Smchd1-201ENSMUST00000127430 Supt5hO55201 1082 aaKnown RBP14.5□□□□□ -0.09
Smchd1-201ENSMUST00000127430 Ccdc180J3QNE4 1664 aa14.5□□□□□ -0.09
Smchd1-201ENSMUST00000127430 Zbtb7cQ8VCZ7 619 aa14.47□□□□□ -0.09
Smchd1-201ENSMUST00000127430 Podxl2Q8CAE9 603 aa14.44□□□□□ -0.1
Smchd1-201ENSMUST00000127430 NrdcQ8BHG1 1161 aa14.36□□□□□ -0.11
Smchd1-201ENSMUST00000127430 Csrnp3P59055 597 aa14.35□□□□□ -0.11
Smchd1-201ENSMUST00000127430 NischQ80TM9 1593 aa14.35□□□□□ -0.11
Smchd1-201ENSMUST00000127430 NeflP08551 543 aa14.32□□□□□ -0.12
Smchd1-201ENSMUST00000127430 Neurod1Q60867 357 aa14.3□□□□□ -0.12
Smchd1-201ENSMUST00000127430 Vsig10D3YX43 558 aa14.25□□□□□ -0.13
Smchd1-201ENSMUST00000127430 Anp32bQ9EST5 272 aaKnown RBP14.24□□□□□ -0.13
Smchd1-201ENSMUST00000127430 NclP09405 707 aaKnown RBP14.22□□□□□ -0.13
Smchd1-201ENSMUST00000127430 Taok2Q6ZQ29 1240 aa14.2□□□□□ -0.14
Smchd1-201ENSMUST00000127430 Rtl1Q7M732 1744 aa14.2□□□□□ -0.14
Smchd1-201ENSMUST00000127430 Mapk8ip2Q9ERE9 830 aa14.19□□□□□ -0.14
Smchd1-201ENSMUST00000127430 Anp32aO35381 247 aa14.19□□□□□ -0.14
Smchd1-201ENSMUST00000127430 TonslQ6NZL6 1363 aa14.19□□□□□ -0.14
Smchd1-201ENSMUST00000127430 Rangap1P46061 589 aaKnown RBP14.16□□□□□ -0.14
Smchd1-201ENSMUST00000127430 Znf316Q6PGE4 1016 aa14.11□□□□□ -0.15
Smchd1-201ENSMUST00000127430 Bcl11aQ9QYE3 773 aa14.08□□□□□ -0.16
Smchd1-201ENSMUST00000127430 ClspnQ80YR7 1315 aa14.07□□□□□ -0.16
Smchd1-201ENSMUST00000127430 Fam50aQ9WV03 339 aaKnown RBP14.07□□□□□ -0.16
Smchd1-201ENSMUST00000127430 Mier1Q5UAK0 511 aa14.06□□□□□ -0.16
Smchd1-201ENSMUST00000127430 Anks4bQ8K3X6 423 aa14.04□□□□□ -0.16
Smchd1-201ENSMUST00000127430 Aplp2Q06335 707 aa14.02□□□□□ -0.16
Smchd1-201ENSMUST00000127430 Chic1Q8CBW7 227 aa14□□□□□ -0.17
Smchd1-201ENSMUST00000127430 Zbtb4Q5F293 982 aa13.99□□□□□ -0.17
Smchd1-201ENSMUST00000127430 IbspQ61711 324 aa13.91□□□□□ -0.18
Smchd1-201ENSMUST00000127430 Ap3b1Q9Z1T1 1105 aa13.9□□□□□ -0.18
Smchd1-201ENSMUST00000127430 Prdm10Q3UTQ7 1184 aa13.88□□□□□ -0.19
Smchd1-201ENSMUST00000127430 Sall2Q9QX96 1004 aa13.86□□□□□ -0.19
Smchd1-201ENSMUST00000127430 Polr3glQ8R0C0 218 aa13.85□□□□□ -0.19
Smchd1-201ENSMUST00000127430 Il27Q8K3I6 234 aa13.85□□□□□ -0.19
Smchd1-201ENSMUST00000127430 Arid4bA2CG63 1314 aaKnown RBP13.83□□□□□ -0.2
Smchd1-201ENSMUST00000127430 DekQ7TNV0 380 aaKnown RBP13.8□□□□□ -0.2
Smchd1-201ENSMUST00000127430 Fam71e1A1L3C1 212 aa13.79□□□□□ -0.2
Smchd1-201ENSMUST00000127430 Os9Q8K2C7 672 aa13.79□□□□□ -0.2
Smchd1-201ENSMUST00000127430 Ppp4r2Q0VGB7 417 aa13.76□□□□□ -0.21
Smchd1-201ENSMUST00000127430 Ccdc9Q8VC31 543 aaKnown RBP13.75□□□□□ -0.21
Smchd1-201ENSMUST00000127430 Spryd3E9Q9B3 442 aa13.74□□□□□ -0.21
Smchd1-201ENSMUST00000127430 Upf2A2AT37 1269 aaKnown RBP13.73□□□□□ -0.21
Smchd1-201ENSMUST00000127430 BccipQ9CWI3 316 aa13.72□□□□□ -0.21
Smchd1-201ENSMUST00000127430 Calr4Q3TQS0 420 aa13.7□□□□□ -0.22
Smchd1-201ENSMUST00000127430 PrkcshO08795 521 aa13.69□□□□□ -0.22
Smchd1-201ENSMUST00000127430 Hsp90aa1P07901 733 aaKnown RBP13.68□□□□□ -0.22
Smchd1-201ENSMUST00000127430 Ubap1lG3UW59 384 aa13.66□□□□□ -0.22
Smchd1-201ENSMUST00000127430 1700123L14RikQ3V2K7 440 aa13.66□□□□□ -0.22
Smchd1-201ENSMUST00000127430 Dcaf1Q80TR8 1506 aa13.66□□□□□ -0.22
Smchd1-201ENSMUST00000127430 Rtn4Q99P72 1162 aaKnown RBP13.65□□□□□ -0.22
Smchd1-201ENSMUST00000127430 Zcchc6Q5BLK4 1491 aaKnown RBP13.64□□□□□ -0.23
Smchd1-201ENSMUST00000127430 Wdr43Q6ZQL4 677 aaKnown RBP13.6□□□□□ -0.23
Smchd1-201ENSMUST00000127430 Plekhg3Q4VAC9 1341 aa13.6□□□□□ -0.23
Smchd1-201ENSMUST00000127430 Eid3Q3V124 375 aa13.53□□□□□ -0.24
Smchd1-201ENSMUST00000127430 Znf326O88291 580 aa13.52□□□□□ -0.25
Smchd1-201ENSMUST00000127430 Trim44Q9QXA7 346 aa13.5□□□□□ -0.25
Smchd1-201ENSMUST00000127430 Lmod2Q3UHZ5 550 aa13.5□□□□□ -0.25
Smchd1-201ENSMUST00000127430 Tnnt2P50752 301 aa13.5□□□□□ -0.25
Smchd1-201ENSMUST00000127430 Nlrp6Q91WS2 869 aa13.49□□□□□ -0.25
Smchd1-201ENSMUST00000127430 Samd1D3YXK1 519 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 873.1 ms