RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 NischQ80TM9 1593 aa13.66□□□□□ -0.22
Bdnf-207ENSMUST00000111047 Rhox8Q6VSS7 320 aa13.42□□□□□ -0.26
Bdnf-207ENSMUST00000111047 Abcc9P70170 1546 aa13.15□□□□□ -0.3
Bdnf-207ENSMUST00000111047 Gm35339A0A140LHH9 1649 aa13□□□□□ -0.33
Bdnf-207ENSMUST00000111047 Abcc8B2RUS7 1588 aa12.83□□□□□ -0.35
Bdnf-207ENSMUST00000111047 Rtl1Q7M732 1744 aa12.65□□□□□ -0.39
Bdnf-207ENSMUST00000111047 Ccdc180J3QNE4 1664 aa12.54□□□□□ -0.4
Bdnf-207ENSMUST00000111047 Rpgrip1Q9EPQ2 1331 aa12.41□□□□□ -0.42
Bdnf-207ENSMUST00000111047 Ccdc136Q3TVA9 1136 aa12.3□□□□□ -0.44
Bdnf-207ENSMUST00000111047 Ehmt2Q9Z148 1263 aaKnown RBP12.17□□□□□ -0.46
Bdnf-207ENSMUST00000111047 HrcG5E8J6 738 aa12.12□□□□□ -0.47
Bdnf-207ENSMUST00000111047 Trim41Q5NCC3 630 aa12.04□□□□□ -0.48
Bdnf-207ENSMUST00000111047 Acin1Q9JIX8 1338 aaKnown RBP12.04□□□□□ -0.48
Bdnf-207ENSMUST00000111047 Zcchc6Q5BLK4 1491 aaKnown RBP12.02□□□□□ -0.48
Bdnf-207ENSMUST00000111047 Rb1cc1Q9ESK9 1588 aa11.99□□□□□ -0.49
Bdnf-207ENSMUST00000111047 Dcaf1Q80TR8 1506 aa11.96□□□□□ -0.5
Bdnf-207ENSMUST00000111047 Cngb1E1AZ71 1325 aa11.84□□□□□ -0.51
Bdnf-207ENSMUST00000111047 Baz1aO88379 1555 aa11.82□□□□□ -0.52
Bdnf-207ENSMUST00000111047 ScribQ80U72 1612 aa11.78□□□□□ -0.52
Bdnf-207ENSMUST00000111047 Kdm5dQ62240 1548 aa11.76□□□□□ -0.53
Bdnf-207ENSMUST00000111047 Gab3Q8BSM5 595 aa11.75□□□□□ -0.53
Bdnf-207ENSMUST00000111047 Pcgf6Q99NA9 353 aa11.74□□□□□ -0.53
Bdnf-207ENSMUST00000111047 NacadQ5SWP3 1504 aa11.74□□□□□ -0.53
Bdnf-207ENSMUST00000111047 Esf1Q3V1V3 845 aaKnown RBP11.69□□□□□ -0.54
Bdnf-207ENSMUST00000111047 Cep164Q5DU05 1446 aa11.63□□□□□ -0.55
Bdnf-207ENSMUST00000111047 Brd4Q9ESU6 1400 aaKnown RBP11.52□□□□□ -0.57
Bdnf-207ENSMUST00000111047 Zeb1Q64318 1117 aa11.51□□□□□ -0.57
Bdnf-207ENSMUST00000111047 Crybg2B7ZCC2 1516 aa11.5□□□□□ -0.57
Bdnf-207ENSMUST00000111047 Chic1Q8CBW7 227 aa11.49□□□□□ -0.57
Bdnf-207ENSMUST00000111047 Smarca2Q6DIC0 1577 aa11.47□□□□□ -0.57
Bdnf-207ENSMUST00000111047 NefmP08553 848 aa11.47□□□□□ -0.57
Bdnf-207ENSMUST00000111047 Supt5hO55201 1082 aaKnown RBP11.4□□□□□ -0.58
Bdnf-207ENSMUST00000111047 Sycp2Q9CUU3 1500 aa11.4□□□□□ -0.58
Bdnf-207ENSMUST00000111047 Rsf1E9PWW9 1441 aaKnown RBP11.39□□□□□ -0.59
Bdnf-207ENSMUST00000111047 Myt1lP97500 1187 aa11.37□□□□□ -0.59
Bdnf-207ENSMUST00000111047 Neurod1Q60867 357 aa11.37□□□□□ -0.59
Bdnf-207ENSMUST00000111047 Golga3P55937 1487 aa11.36□□□□□ -0.59
Bdnf-207ENSMUST00000111047 Npm2Q80W85 207 aa11.35□□□□□ -0.59
Bdnf-207ENSMUST00000111047 UbtfP25976 765 aaKnown RBP11.34□□□□□ -0.59
Bdnf-207ENSMUST00000111047 Las1lA2BE28 776 aaKnown RBP11.34□□□□□ -0.59
Bdnf-207ENSMUST00000111047 Mier1Q5UAK0 511 aa11.33□□□□□ -0.6
Bdnf-207ENSMUST00000111047 DiexfQ8BTT6 772 aaKnown RBP11.33□□□□□ -0.6
Bdnf-207ENSMUST00000111047 Wdr66E9Q743 1299 aa11.3□□□□□ -0.6
Bdnf-207ENSMUST00000111047 Ccdc88bQ4QRL3 1481 aa11.27□□□□□ -0.6
Bdnf-207ENSMUST00000111047 Cecr2E9Q2Z1 1453 aa11.26□□□□□ -0.61
Bdnf-207ENSMUST00000111047 CenpbP27790 599 aa11.23□□□□□ -0.61
Bdnf-207ENSMUST00000111047 1700123L14RikQ3V2K7 440 aa11.21□□□□□ -0.61
Bdnf-207ENSMUST00000111047 Synj1Q8CHC4 1574 aa11.18□□□□□ -0.62
Bdnf-207ENSMUST00000111047 CftrP26361 1476 aa11.16□□□□□ -0.62
Bdnf-207ENSMUST00000111047 Myt1Q8CFC2 1127 aa11.12□□□□□ -0.63
Bdnf-207ENSMUST00000111047 Bcl11aQ9QYE3 773 aa11.11□□□□□ -0.63
Bdnf-207ENSMUST00000111047 Sall2Q9QX96 1004 aa11.09□□□□□ -0.63
Bdnf-207ENSMUST00000111047 Il27Q8K3I6 234 aa11.08□□□□□ -0.64
Bdnf-207ENSMUST00000111047 Csrnp3P59055 597 aa11.04□□□□□ -0.64
Bdnf-207ENSMUST00000111047 Plekhg3Q4VAC9 1341 aa11.04□□□□□ -0.64
Bdnf-207ENSMUST00000111047 Cttnbp2B9EJA2 1648 aa11.03□□□□□ -0.64
Bdnf-207ENSMUST00000111047 TonslQ6NZL6 1363 aa11.02□□□□□ -0.64
Bdnf-207ENSMUST00000111047 Clip1Q922J3 1391 aa11.02□□□□□ -0.64
Bdnf-207ENSMUST00000111047 Fmn1Q05860 1466 aa11.02□□□□□ -0.65
Bdnf-207ENSMUST00000111047 Cdk11bP24788 784 aaKnown RBP11□□□□□ -0.65
Bdnf-207ENSMUST00000111047 BicraF8VPZ9 1578 aa11□□□□□ -0.65
Bdnf-207ENSMUST00000111047 Ap3b1Q9Z1T1 1105 aa10.99□□□□□ -0.65
Bdnf-207ENSMUST00000111047 Smarca4Q3TKT4 1613 aaKnown RBP10.98□□□□□ -0.65
Bdnf-207ENSMUST00000111047 ClspnQ80YR7 1315 aa10.98□□□□□ -0.65
Bdnf-207ENSMUST00000111047 Nop58Q6DFW4 536 aaKnown RBP10.98□□□□□ -0.65
Bdnf-207ENSMUST00000111047 Ppargc1bQ8VHJ7 1014 aa10.98□□□□□ -0.65
Bdnf-207ENSMUST00000111047 Cep162Q6ZQ06 1403 aa10.97□□□□□ -0.65
Bdnf-207ENSMUST00000111047 Rapgef2Q8CHG7 1496 aa10.94□□□□□ -0.66
Bdnf-207ENSMUST00000111047 PrkcshO08795 521 aa10.94□□□□□ -0.66
Bdnf-207ENSMUST00000111047 Top2bQ64511 1612 aa10.93□□□□□ -0.66
Bdnf-207ENSMUST00000111047 Aebp2Q9Z248 504 aaKnown RBP10.9□□□□□ -0.66
Bdnf-207ENSMUST00000111047 Cc2d2aQ8CFW7 1633 aa10.9□□□□□ -0.66
Bdnf-207ENSMUST00000111047 Anks4bQ8K3X6 423 aa10.88□□□□□ -0.67
Bdnf-207ENSMUST00000111047 Top2aQ01320 1528 aaKnown RBP10.85□□□□□ -0.67
Bdnf-207ENSMUST00000111047 Ube2uB1AUC4 352 aa10.84□□□□□ -0.67
Bdnf-207ENSMUST00000111047 Fam50aQ9WV03 339 aaKnown RBP10.84□□□□□ -0.67
Bdnf-207ENSMUST00000111047 Iqgap2Q3UQ44 1575 aa10.83□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Gm38655A0A286YDK6 273 aa10.82□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Atad2bE9Q166 1460 aaKnown RBP10.82□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Pds5bQ4VA53 1446 aaKnown RBP10.82□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Eid3Q3V124 375 aa10.82□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Eea1Q8BL66 1411 aa10.82□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Setd5Q5XJV7 1441 aa10.81□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Kif15Q6P9L6 1387 aa10.81□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Npm1Q61937 292 aaKnown RBP10.78□□□□□ -0.68
Bdnf-207ENSMUST00000111047 Lmod2Q3UHZ5 550 aa10.77□□□□□ -0.69
Bdnf-207ENSMUST00000111047 NclP09405 707 aaKnown RBP10.76□□□□□ -0.69
Bdnf-207ENSMUST00000111047 Aplp2Q06335 707 aa10.75□□□□□ -0.69
Bdnf-207ENSMUST00000111047 Amer1Q7TS75 1132 aa10.75□□□□□ -0.69
Bdnf-207ENSMUST00000111047 Ifnlr1Q8CGK5 535 aa10.73□□□□□ -0.69
Bdnf-207ENSMUST00000111047 BlmO88700 1416 aa10.73□□□□□ -0.69
Bdnf-207ENSMUST00000111047 Ercc6F8VPZ5 1481 aa10.72□□□□□ -0.69
Bdnf-207ENSMUST00000111047 Stra8P70278 393 aa10.71□□□□□ -0.69
Bdnf-207ENSMUST00000111047 Ccdc18Q640L5 1455 aa10.71□□□□□ -0.7
Bdnf-207ENSMUST00000111047 Tnnt3Q9QZ47 272 aa10.68□□□□□ -0.7
Bdnf-207ENSMUST00000111047 Ubl4bQ9CQ84 188 aa10.67□□□□□ -0.7
Bdnf-207ENSMUST00000111047 Arhgap35Q91YM2 1499 aa10.65□□□□□ -0.7
Bdnf-207ENSMUST00000111047 Ccer2J3QPU5 274 aa10.62□□□□□ -0.71
Bdnf-207ENSMUST00000111047 Mapk8ip2Q9ERE9 830 aa10.62□□□□□ -0.71
Bdnf-207ENSMUST00000111047 Ncapd3Q6ZQK0 1506 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms