RNA–Protein interactions for RNA: ENSMUST00000107647.7

Slc44a1-204, Transcript of Choline transporter-like protein 1, mousemouse

TSL 2 BASIC

Gene Slc44a1, Length 2,176 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1-204ENSMUST00000107647 Rpgrip1Q9EPQ2 1331 aa20.9■□□□□ 0.94
Slc44a1-204ENSMUST00000107647 Rtl1Q7M732 1744 aa20.26■□□□□ 0.83
Slc44a1-204ENSMUST00000107647 Ccdc180J3QNE4 1664 aa19.97■□□□□ 0.79
Slc44a1-204ENSMUST00000107647 Acin1Q9JIX8 1338 aaKnown RBP19.84■□□□□ 0.77
Slc44a1-204ENSMUST00000107647 NischQ80TM9 1593 aa19.77■□□□□ 0.76
Slc44a1-204ENSMUST00000107647 Pcgf6Q99NA9 353 aa19.52■□□□□ 0.72
Slc44a1-204ENSMUST00000107647 Abcc9P70170 1546 aa19.34■□□□□ 0.69
Slc44a1-204ENSMUST00000107647 Dcaf1Q80TR8 1506 aa19.18■□□□□ 0.66
Slc44a1-204ENSMUST00000107647 Gm35339A0A140LHH9 1649 aa19.15■□□□□ 0.66
Slc44a1-204ENSMUST00000107647 Las1lA2BE28 776 aaKnown RBP19.12■□□□□ 0.65
Slc44a1-204ENSMUST00000107647 Rhox8Q6VSS7 320 aa19.04■□□□□ 0.64
Slc44a1-204ENSMUST00000107647 Myt1Q8CFC2 1127 aa19.03■□□□□ 0.64
Slc44a1-204ENSMUST00000107647 Trim41Q5NCC3 630 aa19■□□□□ 0.63
Slc44a1-204ENSMUST00000107647 Zcchc6Q5BLK4 1491 aaKnown RBP18.99■□□□□ 0.63
Slc44a1-204ENSMUST00000107647 Neurod1Q60867 357 aa18.83■□□□□ 0.61
Slc44a1-204ENSMUST00000107647 Supt5hO55201 1082 aaKnown RBP18.77■□□□□ 0.6
Slc44a1-204ENSMUST00000107647 HrcG5E8J6 738 aa18.73■□□□□ 0.59
Slc44a1-204ENSMUST00000107647 CenpbP27790 599 aa18.69■□□□□ 0.58
Slc44a1-204ENSMUST00000107647 Ehmt2Q9Z148 1263 aaKnown RBP18.65■□□□□ 0.58
Slc44a1-204ENSMUST00000107647 Abcc8B2RUS7 1588 aa18.52■□□□□ 0.56
Slc44a1-204ENSMUST00000107647 1700123L14RikQ3V2K7 440 aa18.5■□□□□ 0.55
Slc44a1-204ENSMUST00000107647 Anks4bQ8K3X6 423 aa18.42■□□□□ 0.54
Slc44a1-204ENSMUST00000107647 Cngb1E1AZ71 1325 aa18.38■□□□□ 0.53
Slc44a1-204ENSMUST00000107647 DiexfQ8BTT6 772 aaKnown RBP18.35■□□□□ 0.53
Slc44a1-204ENSMUST00000107647 Aplp2Q06335 707 aa18.3■□□□□ 0.52
Slc44a1-204ENSMUST00000107647 Csrnp3P59055 597 aa18.18■□□□□ 0.5
Slc44a1-204ENSMUST00000107647 NefmP08553 848 aa18.14■□□□□ 0.49
Slc44a1-204ENSMUST00000107647 Bcl11aQ9QYE3 773 aa18.03■□□□□ 0.48
Slc44a1-204ENSMUST00000107647 Sall2Q9QX96 1004 aa17.99■□□□□ 0.47
Slc44a1-204ENSMUST00000107647 Zeb1Q64318 1117 aa17.97■□□□□ 0.47
Slc44a1-204ENSMUST00000107647 Cep164Q5DU05 1446 aa17.9■□□□□ 0.46
Slc44a1-204ENSMUST00000107647 Cdk11bP24788 784 aaKnown RBP17.82■□□□□ 0.44
Slc44a1-204ENSMUST00000107647 Nop58Q6DFW4 536 aaKnown RBP17.69■□□□□ 0.42
Slc44a1-204ENSMUST00000107647 Mier1Q5UAK0 511 aa17.62■□□□□ 0.41
Slc44a1-204ENSMUST00000107647 ClspnQ80YR7 1315 aa17.61■□□□□ 0.41
Slc44a1-204ENSMUST00000107647 Ccdc136Q3TVA9 1136 aa17.46■□□□□ 0.39
Slc44a1-204ENSMUST00000107647 Fam71e1A1L3C1 212 aa17.46■□□□□ 0.39
Slc44a1-204ENSMUST00000107647 Wdr66E9Q743 1299 aa17.45■□□□□ 0.38
Slc44a1-204ENSMUST00000107647 Rtl5Q5DTT4 599 aa17.44■□□□□ 0.38
Slc44a1-204ENSMUST00000107647 Tnnt3Q9QZ47 272 aa17.43■□□□□ 0.38
Slc44a1-204ENSMUST00000107647 Rb1cc1Q9ESK9 1588 aa17.42■□□□□ 0.38
Slc44a1-204ENSMUST00000107647 Amer1Q7TS75 1132 aa17.41■□□□□ 0.38
Slc44a1-204ENSMUST00000107647 PrkcshO08795 521 aa17.4■□□□□ 0.38
Slc44a1-204ENSMUST00000107647 Gm38655A0A286YDK6 273 aa17.38■□□□□ 0.37
Slc44a1-204ENSMUST00000107647 Aebp2Q9Z248 504 aaKnown RBP17.38■□□□□ 0.37
Slc44a1-204ENSMUST00000107647 ScribQ80U72 1612 aa17.33■□□□□ 0.36
Slc44a1-204ENSMUST00000107647 Baz1aO88379 1555 aa17.3■□□□□ 0.36
Slc44a1-204ENSMUST00000107647 Anp32aO35381 247 aa17.19■□□□□ 0.34
Slc44a1-204ENSMUST00000107647 Pelp1Q9DBD5 1123 aaKnown RBP17.19■□□□□ 0.34
Slc44a1-204ENSMUST00000107647 Ifnlr1Q8CGK5 535 aa17.12■□□□□ 0.33
Slc44a1-204ENSMUST00000107647 Rsf1E9PWW9 1441 aaKnown RBP17.11■□□□□ 0.33
Slc44a1-204ENSMUST00000107647 Hnrnpul2Q00PI9 745 aaKnown RBP17.11■□□□□ 0.33
Slc44a1-204ENSMUST00000107647 Mapk8ip2Q9ERE9 830 aa17.08■□□□□ 0.32
Slc44a1-204ENSMUST00000107647 TonslQ6NZL6 1363 aa17.06■□□□□ 0.32
Slc44a1-204ENSMUST00000107647 SafbD3YXK2 937 aaKnown RBP17.06■□□□□ 0.32
Slc44a1-204ENSMUST00000107647 Ube2uB1AUC4 352 aa17.04■□□□□ 0.32
Slc44a1-204ENSMUST00000107647 Smarca2Q6DIC0 1577 aa17.01■□□□□ 0.31
Slc44a1-204ENSMUST00000107647 Chic1Q8CBW7 227 aa16.92■□□□□ 0.3
Slc44a1-204ENSMUST00000107647 Gab3Q8BSM5 595 aa16.92■□□□□ 0.3
Slc44a1-204ENSMUST00000107647 Hdac5Q9Z2V6 1113 aa16.91■□□□□ 0.3
Slc44a1-204ENSMUST00000107647 Stra8P70278 393 aa16.91■□□□□ 0.3
Slc44a1-204ENSMUST00000107647 Ccdc9Q8VC31 543 aaKnown RBP16.87■□□□□ 0.29
Slc44a1-204ENSMUST00000107647 Crybg2B7ZCC2 1516 aa16.86■□□□□ 0.29
Slc44a1-204ENSMUST00000107647 Ppargc1bQ8VHJ7 1014 aa16.86■□□□□ 0.29
Slc44a1-204ENSMUST00000107647 NacadQ5SWP3 1504 aa16.83■□□□□ 0.28
Slc44a1-204ENSMUST00000107647 UbtfP25976 765 aaKnown RBP16.82■□□□□ 0.28
Slc44a1-204ENSMUST00000107647 Ccdc88bQ4QRL3 1481 aa16.81■□□□□ 0.28
Slc44a1-204ENSMUST00000107647 Fgd1P52734 960 aa16.8■□□□□ 0.28
Slc44a1-204ENSMUST00000107647 NrdcQ8BHG1 1161 aa16.8■□□□□ 0.28
Slc44a1-204ENSMUST00000107647 Znf710Q3U288 666 aa16.79■□□□□ 0.28
Slc44a1-204ENSMUST00000107647 Supt16hQ920B9 1047 aa16.75■□□□□ 0.27
Slc44a1-204ENSMUST00000107647 Golga3P55937 1487 aa16.75■□□□□ 0.27
Slc44a1-204ENSMUST00000107647 Nolc1E9Q5C9 702 aaKnown RBP16.74■□□□□ 0.27
Slc44a1-204ENSMUST00000107647 Upf2A2AT37 1269 aaKnown RBP16.72■□□□□ 0.27
Slc44a1-204ENSMUST00000107647 Kdm5dQ62240 1548 aa16.7■□□□□ 0.26
Slc44a1-204ENSMUST00000107647 Calr4Q3TQS0 420 aa16.7■□□□□ 0.26
Slc44a1-204ENSMUST00000107647 Gtf3c3Q3TMP1 882 aa16.67■□□□□ 0.26
Slc44a1-204ENSMUST00000107647 Ccdc27Q3V036 639 aa16.67■□□□□ 0.26
Slc44a1-204ENSMUST00000107647 Pknox2Q8BG99 474 aa16.66■□□□□ 0.26
Slc44a1-204ENSMUST00000107647 Ncapd3Q6ZQK0 1506 aa16.65■□□□□ 0.26
Slc44a1-204ENSMUST00000107647 Ap3b1Q9Z1T1 1105 aa16.65■□□□□ 0.26
Slc44a1-204ENSMUST00000107647 Brd4Q9ESU6 1400 aaKnown RBP16.64■□□□□ 0.25
Slc44a1-204ENSMUST00000107647 Rapgef2Q8CHG7 1496 aa16.61■□□□□ 0.25
Slc44a1-204ENSMUST00000107647 Irx3P81067 507 aa16.59■□□□□ 0.25
Slc44a1-204ENSMUST00000107647 Rpap1Q80TE0 1409 aa16.58■□□□□ 0.25
Slc44a1-204ENSMUST00000107647 Washc2Q6PGL7 1334 aa16.56■□□□□ 0.24
Slc44a1-204ENSMUST00000107647 Wdr43Q6ZQL4 677 aaKnown RBP16.51■□□□□ 0.23
Slc44a1-204ENSMUST00000107647 Top2bQ64511 1612 aa16.49■□□□□ 0.23
Slc44a1-204ENSMUST00000107647 Sycp2Q9CUU3 1500 aa16.49■□□□□ 0.23
Slc44a1-204ENSMUST00000107647 Kdm5bQ80Y84 1544 aa16.47■□□□□ 0.23
Slc44a1-204ENSMUST00000107647 Plcd4Q8K3R3 807 aa16.45■□□□□ 0.22
Slc44a1-204ENSMUST00000107647 Ipo4Q8VI75 1082 aa16.44■□□□□ 0.22
Slc44a1-204ENSMUST00000107647 Hsp90aa1P07901 733 aaKnown RBP16.43■□□□□ 0.22
Slc44a1-204ENSMUST00000107647 Ttbk1Q6PCN3 1308 aa16.41■□□□□ 0.22
Slc44a1-204ENSMUST00000107647 Ppp4r2Q0VGB7 417 aa16.4■□□□□ 0.22
Slc44a1-204ENSMUST00000107647 Cep162Q6ZQ06 1403 aa16.39■□□□□ 0.21
Slc44a1-204ENSMUST00000107647 Il27Q8K3I6 234 aa16.38■□□□□ 0.21
Slc44a1-204ENSMUST00000107647 UacaQ8CGB3 1411 aa16.34■□□□□ 0.21
Slc44a1-204ENSMUST00000107647 Ipo9Q91YE6 1041 aa16.34■□□□□ 0.21
Slc44a1-204ENSMUST00000107647 Liat1Q810M6 228 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms