RNA–Protein interactions for RNA: ENSMUST00000086198.4

Ncapd3-202, Transcript of Condensin-2 complex subunit D3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ncapd3, Length 4,675 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd3-202ENSMUST00000086198 Rhox8Q6VSS7 320 aa17.38■□□□□ 0.37
Ncapd3-202ENSMUST00000086198 Rpgrip1Q9EPQ2 1331 aa16.5■□□□□ 0.23
Ncapd3-202ENSMUST00000086198 Las1lA2BE28 776 aaKnown RBP16.07■□□□□ 0.16
Ncapd3-202ENSMUST00000086198 NischQ80TM9 1593 aa15.76■□□□□ 0.11
Ncapd3-202ENSMUST00000086198 Cngb1E1AZ71 1325 aa15.64■□□□□ 0.09
Ncapd3-202ENSMUST00000086198 Myt1Q8CFC2 1127 aa15.54■□□□□ 0.08
Ncapd3-202ENSMUST00000086198 Ccdc136Q3TVA9 1136 aa15.47■□□□□ 0.07
Ncapd3-202ENSMUST00000086198 Esf1Q3V1V3 845 aaKnown RBP15.37■□□□□ 0.05
Ncapd3-202ENSMUST00000086198 CenpbP27790 599 aa15.37■□□□□ 0.05
Ncapd3-202ENSMUST00000086198 Amer1Q7TS75 1132 aa15.35■□□□□ 0.05
Ncapd3-202ENSMUST00000086198 Trim41Q5NCC3 630 aa15.34■□□□□ 0.05
Ncapd3-202ENSMUST00000086198 DiexfQ8BTT6 772 aaKnown RBP15.24■□□□□ 0.03
Ncapd3-202ENSMUST00000086198 Pelp1Q9DBD5 1123 aaKnown RBP15.14■□□□□ 0.01
Ncapd3-202ENSMUST00000086198 Ehmt2Q9Z148 1263 aaKnown RBP15.14■□□□□ 0.01
Ncapd3-202ENSMUST00000086198 Acin1Q9JIX8 1338 aaKnown RBP15.05■□□□□ -0
Ncapd3-202ENSMUST00000086198 Pcgf6Q99NA9 353 aa15.01□□□□□ -0.01
Ncapd3-202ENSMUST00000086198 Gab3Q8BSM5 595 aa15□□□□□ -0.01
Ncapd3-202ENSMUST00000086198 Zeb1Q64318 1117 aa14.96□□□□□ -0.01
Ncapd3-202ENSMUST00000086198 Npm2Q80W85 207 aa14.95□□□□□ -0.02
Ncapd3-202ENSMUST00000086198 Myt1lP97500 1187 aa14.77□□□□□ -0.04
Ncapd3-202ENSMUST00000086198 Abcc9P70170 1546 aa14.77□□□□□ -0.05
Ncapd3-202ENSMUST00000086198 Ube2uB1AUC4 352 aa14.77□□□□□ -0.05
Ncapd3-202ENSMUST00000086198 Wdr66E9Q743 1299 aa14.72□□□□□ -0.05
Ncapd3-202ENSMUST00000086198 HrcG5E8J6 738 aa14.68□□□□□ -0.06
Ncapd3-202ENSMUST00000086198 Ccdc180J3QNE4 1664 aa14.61□□□□□ -0.07
Ncapd3-202ENSMUST00000086198 Zcchc6Q5BLK4 1491 aaKnown RBP14.54□□□□□ -0.08
Ncapd3-202ENSMUST00000086198 NefmP08553 848 aa14.5□□□□□ -0.09
Ncapd3-202ENSMUST00000086198 Rtl1Q7M732 1744 aa14.49□□□□□ -0.09
Ncapd3-202ENSMUST00000086198 Abcc8B2RUS7 1588 aa14.47□□□□□ -0.09
Ncapd3-202ENSMUST00000086198 Il27Q8K3I6 234 aa14.43□□□□□ -0.1
Ncapd3-202ENSMUST00000086198 UbtfP25976 765 aaKnown RBP14.42□□□□□ -0.1
Ncapd3-202ENSMUST00000086198 Supt5hO55201 1082 aaKnown RBP14.41□□□□□ -0.1
Ncapd3-202ENSMUST00000086198 Cdk11bP24788 784 aaKnown RBP14.38□□□□□ -0.11
Ncapd3-202ENSMUST00000086198 Ttbk1Q6PCN3 1308 aa14.37□□□□□ -0.11
Ncapd3-202ENSMUST00000086198 Neurod1Q60867 357 aa14.37□□□□□ -0.11
Ncapd3-202ENSMUST00000086198 Rtl5Q5DTT4 599 aa14.33□□□□□ -0.12
Ncapd3-202ENSMUST00000086198 Gm35339A0A140LHH9 1649 aa14.33□□□□□ -0.12
Ncapd3-202ENSMUST00000086198 Bcl11aQ9QYE3 773 aa14.28□□□□□ -0.12
Ncapd3-202ENSMUST00000086198 Aplp2Q06335 707 aa14.2□□□□□ -0.14
Ncapd3-202ENSMUST00000086198 Stra8P70278 393 aa14.17□□□□□ -0.14
Ncapd3-202ENSMUST00000086198 Nop58Q6DFW4 536 aaKnown RBP14.17□□□□□ -0.14
Ncapd3-202ENSMUST00000086198 Tnnt3Q9QZ47 272 aa14.16□□□□□ -0.14
Ncapd3-202ENSMUST00000086198 Csrnp3P59055 597 aa14.13□□□□□ -0.15
Ncapd3-202ENSMUST00000086198 Anks4bQ8K3X6 423 aa14.13□□□□□ -0.15
Ncapd3-202ENSMUST00000086198 4933416C03RikQ3V063 378 aa14.11□□□□□ -0.15
Ncapd3-202ENSMUST00000086198 1700123L14RikQ3V2K7 440 aa14.11□□□□□ -0.15
Ncapd3-202ENSMUST00000086198 4930567H17RikQ3V0K5 233 aa14.11□□□□□ -0.15
Ncapd3-202ENSMUST00000086198 Fam50aQ9WV03 339 aaKnown RBP14.05□□□□□ -0.16
Ncapd3-202ENSMUST00000086198 Npm1Q61937 292 aaKnown RBP14.04□□□□□ -0.16
Ncapd3-202ENSMUST00000086198 Ap3b1Q9Z1T1 1105 aa14.03□□□□□ -0.16
Ncapd3-202ENSMUST00000086198 Brd4Q9ESU6 1400 aaKnown RBP13.98□□□□□ -0.17
Ncapd3-202ENSMUST00000086198 Anp32aO35381 247 aa13.9□□□□□ -0.18
Ncapd3-202ENSMUST00000086198 Anp32bQ9EST5 272 aaKnown RBP13.89□□□□□ -0.19
Ncapd3-202ENSMUST00000086198 NclP09405 707 aaKnown RBP13.88□□□□□ -0.19
Ncapd3-202ENSMUST00000086198 Slc24a1Q91WD8 1130 aa13.88□□□□□ -0.19
Ncapd3-202ENSMUST00000086198 Gm38655A0A286YDK6 273 aa13.87□□□□□ -0.19
Ncapd3-202ENSMUST00000086198 Rb1cc1Q9ESK9 1588 aa13.83□□□□□ -0.2
Ncapd3-202ENSMUST00000086198 TonslQ6NZL6 1363 aa13.81□□□□□ -0.2
Ncapd3-202ENSMUST00000086198 NrdcQ8BHG1 1161 aa13.81□□□□□ -0.2
Ncapd3-202ENSMUST00000086198 Mier1Q5UAK0 511 aa13.78□□□□□ -0.2
Ncapd3-202ENSMUST00000086198 NacadQ5SWP3 1504 aa13.77□□□□□ -0.21
Ncapd3-202ENSMUST00000086198 Ccdc9Q8VC31 543 aaKnown RBP13.75□□□□□ -0.21
Ncapd3-202ENSMUST00000086198 Cep164Q5DU05 1446 aa13.75□□□□□ -0.21
Ncapd3-202ENSMUST00000086198 Dcaf1Q80TR8 1506 aa13.74□□□□□ -0.21
Ncapd3-202ENSMUST00000086198 Os9Q8K2C7 672 aa13.74□□□□□ -0.21
Ncapd3-202ENSMUST00000086198 Lmod2Q3UHZ5 550 aa13.74□□□□□ -0.21
Ncapd3-202ENSMUST00000086198 Plekhg3Q4VAC9 1341 aa13.72□□□□□ -0.21
Ncapd3-202ENSMUST00000086198 Ythdc1E9Q5K9 736 aaKnown RBP13.68□□□□□ -0.22
Ncapd3-202ENSMUST00000086198 Fam71e1A1L3C1 212 aa13.67□□□□□ -0.22
Ncapd3-202ENSMUST00000086198 Chic1Q8CBW7 227 aa13.67□□□□□ -0.22
Ncapd3-202ENSMUST00000086198 Sall2Q9QX96 1004 aa13.66□□□□□ -0.22
Ncapd3-202ENSMUST00000086198 Ubl4bQ9CQ84 188 aa13.65□□□□□ -0.22
Ncapd3-202ENSMUST00000086198 DaxxO35613 739 aa13.64□□□□□ -0.23
Ncapd3-202ENSMUST00000086198 Clip1Q922J3 1391 aa13.64□□□□□ -0.23
Ncapd3-202ENSMUST00000086198 PrkcshO08795 521 aa13.63□□□□□ -0.23
Ncapd3-202ENSMUST00000086198 Ppargc1bQ8VHJ7 1014 aa13.6□□□□□ -0.23
Ncapd3-202ENSMUST00000086198 ClspnQ80YR7 1315 aa13.58□□□□□ -0.23
Ncapd3-202ENSMUST00000086198 Baz1aO88379 1555 aa13.58□□□□□ -0.24
Ncapd3-202ENSMUST00000086198 NeflP08551 543 aa13.57□□□□□ -0.24
Ncapd3-202ENSMUST00000086198 Ccer2J3QPU5 274 aa13.54□□□□□ -0.24
Ncapd3-202ENSMUST00000086198 Hnrnpul2Q00PI9 745 aaKnown RBP13.54□□□□□ -0.24
Ncapd3-202ENSMUST00000086198 Pknox2Q8BG99 474 aa13.53□□□□□ -0.24
Ncapd3-202ENSMUST00000086198 Hdac5Q9Z2V6 1113 aa13.52□□□□□ -0.24
Ncapd3-202ENSMUST00000086198 Zbtb7cQ8VCZ7 619 aa13.51□□□□□ -0.25
Ncapd3-202ENSMUST00000086198 Mapk8ip2Q9ERE9 830 aa13.48□□□□□ -0.25
Ncapd3-202ENSMUST00000086198 Eif5bQ05D44 1216 aaKnown RBP13.47□□□□□ -0.25
Ncapd3-202ENSMUST00000086198 Hsp90aa1P07901 733 aaKnown RBP13.46□□□□□ -0.25
Ncapd3-202ENSMUST00000086198 Golga3P55937 1487 aa13.45□□□□□ -0.26
Ncapd3-202ENSMUST00000086198 Irx3P81067 507 aa13.45□□□□□ -0.26
Ncapd3-202ENSMUST00000086198 Ifnlr1Q8CGK5 535 aa13.44□□□□□ -0.26
Ncapd3-202ENSMUST00000086198 Rsf1E9PWW9 1441 aaKnown RBP13.43□□□□□ -0.26
Ncapd3-202ENSMUST00000086198 Gm13697A2AK42 830 aa13.42□□□□□ -0.26
Ncapd3-202ENSMUST00000086198 Fkbp15Q6P9Q6 1216 aaKnown RBP13.41□□□□□ -0.26
Ncapd3-202ENSMUST00000086198 Eid3Q3V124 375 aa13.4□□□□□ -0.26
Ncapd3-202ENSMUST00000086198 Kdm5dQ62240 1548 aa13.38□□□□□ -0.27
Ncapd3-202ENSMUST00000086198 Kif15Q6P9L6 1387 aa13.38□□□□□ -0.27
Ncapd3-202ENSMUST00000086198 Ccdc27Q3V036 639 aa13.36□□□□□ -0.27
Ncapd3-202ENSMUST00000086198 Erich6D3Z6S9 713 aa13.34□□□□□ -0.27
Ncapd3-202ENSMUST00000086198 BlmO88700 1416 aa13.34□□□□□ -0.27
Ncapd3-202ENSMUST00000086198 Setd5Q5XJV7 1441 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms