RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Rhox8Q6VSS7 320 aa21.93■■□□□ 1.1
Pdlim5-201ENSMUST00000029941 NischQ80TM9 1593 aa21.16■□□□□ 0.98
Pdlim5-201ENSMUST00000029941 Rpgrip1Q9EPQ2 1331 aa20.54■□□□□ 0.88
Pdlim5-201ENSMUST00000029941 Abcc9P70170 1546 aa20.14■□□□□ 0.81
Pdlim5-201ENSMUST00000029941 Rtl1Q7M732 1744 aa20.04■□□□□ 0.8
Pdlim5-201ENSMUST00000029941 Ccdc180J3QNE4 1664 aa19.95■□□□□ 0.78
Pdlim5-201ENSMUST00000029941 Ehmt2Q9Z148 1263 aaKnown RBP19.89■□□□□ 0.77
Pdlim5-201ENSMUST00000029941 Ccdc136Q3TVA9 1136 aa19.83■□□□□ 0.76
Pdlim5-201ENSMUST00000029941 Abcc8B2RUS7 1588 aa19.61■□□□□ 0.73
Pdlim5-201ENSMUST00000029941 Gm35339A0A140LHH9 1649 aa19.56■□□□□ 0.72
Pdlim5-201ENSMUST00000029941 Acin1Q9JIX8 1338 aaKnown RBP19.5■□□□□ 0.71
Pdlim5-201ENSMUST00000029941 Trim41Q5NCC3 630 aa19.48■□□□□ 0.71
Pdlim5-201ENSMUST00000029941 Cngb1E1AZ71 1325 aa19.37■□□□□ 0.69
Pdlim5-201ENSMUST00000029941 HrcG5E8J6 738 aa19.34■□□□□ 0.69
Pdlim5-201ENSMUST00000029941 Esf1Q3V1V3 845 aaKnown RBP19.17■□□□□ 0.66
Pdlim5-201ENSMUST00000029941 Gab3Q8BSM5 595 aa19.17■□□□□ 0.66
Pdlim5-201ENSMUST00000029941 Zeb1Q64318 1117 aa19.01■□□□□ 0.63
Pdlim5-201ENSMUST00000029941 Las1lA2BE28 776 aaKnown RBP18.99■□□□□ 0.63
Pdlim5-201ENSMUST00000029941 Wdr66E9Q743 1299 aa18.9■□□□□ 0.62
Pdlim5-201ENSMUST00000029941 Zcchc6Q5BLK4 1491 aaKnown RBP18.87■□□□□ 0.61
Pdlim5-201ENSMUST00000029941 NefmP08553 848 aa18.83■□□□□ 0.61
Pdlim5-201ENSMUST00000029941 Pcgf6Q99NA9 353 aa18.76■□□□□ 0.59
Pdlim5-201ENSMUST00000029941 Npm2Q80W85 207 aa18.72■□□□□ 0.59
Pdlim5-201ENSMUST00000029941 Myt1lP97500 1187 aa18.65■□□□□ 0.58
Pdlim5-201ENSMUST00000029941 Rb1cc1Q9ESK9 1588 aa18.63■□□□□ 0.57
Pdlim5-201ENSMUST00000029941 Dcaf1Q80TR8 1506 aa18.6■□□□□ 0.57
Pdlim5-201ENSMUST00000029941 UbtfP25976 765 aaKnown RBP18.55■□□□□ 0.56
Pdlim5-201ENSMUST00000029941 Supt5hO55201 1082 aaKnown RBP18.41■□□□□ 0.54
Pdlim5-201ENSMUST00000029941 Cep164Q5DU05 1446 aa18.38■□□□□ 0.53
Pdlim5-201ENSMUST00000029941 Baz1aO88379 1555 aa18.3■□□□□ 0.52
Pdlim5-201ENSMUST00000029941 Mier1Q5UAK0 511 aa18.26■□□□□ 0.51
Pdlim5-201ENSMUST00000029941 Ube2uB1AUC4 352 aa18.25■□□□□ 0.51
Pdlim5-201ENSMUST00000029941 Brd4Q9ESU6 1400 aaKnown RBP18.23■□□□□ 0.51
Pdlim5-201ENSMUST00000029941 CenpbP27790 599 aa18.18■□□□□ 0.5
Pdlim5-201ENSMUST00000029941 NacadQ5SWP3 1504 aa18.18■□□□□ 0.5
Pdlim5-201ENSMUST00000029941 Cdk11bP24788 784 aaKnown RBP18.17■□□□□ 0.5
Pdlim5-201ENSMUST00000029941 Chic1Q8CBW7 227 aa18.09■□□□□ 0.49
Pdlim5-201ENSMUST00000029941 Nop58Q6DFW4 536 aaKnown RBP18.04■□□□□ 0.48
Pdlim5-201ENSMUST00000029941 Pelp1Q9DBD5 1123 aaKnown RBP18.04■□□□□ 0.48
Pdlim5-201ENSMUST00000029941 Kdm5dQ62240 1548 aa18.03■□□□□ 0.48
Pdlim5-201ENSMUST00000029941 Il27Q8K3I6 234 aa18.03■□□□□ 0.48
Pdlim5-201ENSMUST00000029941 Stra8P70278 393 aa18.01■□□□□ 0.47
Pdlim5-201ENSMUST00000029941 TonslQ6NZL6 1363 aa18.01■□□□□ 0.47
Pdlim5-201ENSMUST00000029941 Ap3b1Q9Z1T1 1105 aa17.92■□□□□ 0.46
Pdlim5-201ENSMUST00000029941 Ppargc1bQ8VHJ7 1014 aa17.86■□□□□ 0.45
Pdlim5-201ENSMUST00000029941 ClspnQ80YR7 1315 aa17.86■□□□□ 0.45
Pdlim5-201ENSMUST00000029941 Neurod1Q60867 357 aa17.84■□□□□ 0.45
Pdlim5-201ENSMUST00000029941 Golga3P55937 1487 aa17.82■□□□□ 0.44
Pdlim5-201ENSMUST00000029941 Tnnt3Q9QZ47 272 aa17.81■□□□□ 0.44
Pdlim5-201ENSMUST00000029941 Sall2Q9QX96 1004 aa17.81■□□□□ 0.44
Pdlim5-201ENSMUST00000029941 Fam50aQ9WV03 339 aaKnown RBP17.8■□□□□ 0.44
Pdlim5-201ENSMUST00000029941 Plekhg3Q4VAC9 1341 aa17.78■□□□□ 0.44
Pdlim5-201ENSMUST00000029941 NclP09405 707 aaKnown RBP17.74■□□□□ 0.43
Pdlim5-201ENSMUST00000029941 Rsf1E9PWW9 1441 aaKnown RBP17.73■□□□□ 0.43
Pdlim5-201ENSMUST00000029941 Myt1Q8CFC2 1127 aa17.72■□□□□ 0.43
Pdlim5-201ENSMUST00000029941 Clip1Q922J3 1391 aa17.7■□□□□ 0.42
Pdlim5-201ENSMUST00000029941 Slc24a1Q91WD8 1130 aa17.69■□□□□ 0.42
Pdlim5-201ENSMUST00000029941 ScribQ80U72 1612 aa17.67■□□□□ 0.42
Pdlim5-201ENSMUST00000029941 Anks4bQ8K3X6 423 aa17.65■□□□□ 0.42
Pdlim5-201ENSMUST00000029941 Crybg2B7ZCC2 1516 aa17.65■□□□□ 0.42
Pdlim5-201ENSMUST00000029941 Smarca2Q6DIC0 1577 aa17.58■□□□□ 0.4
Pdlim5-201ENSMUST00000029941 Ccdc88bQ4QRL3 1481 aa17.5■□□□□ 0.39
Pdlim5-201ENSMUST00000029941 Sycp2Q9CUU3 1500 aa17.5■□□□□ 0.39
Pdlim5-201ENSMUST00000029941 Lmod2Q3UHZ5 550 aa17.48■□□□□ 0.39
Pdlim5-201ENSMUST00000029941 Csrnp3P59055 597 aa17.46■□□□□ 0.39
Pdlim5-201ENSMUST00000029941 NrdcQ8BHG1 1161 aa17.46■□□□□ 0.39
Pdlim5-201ENSMUST00000029941 Npm1Q61937 292 aaKnown RBP17.46■□□□□ 0.39
Pdlim5-201ENSMUST00000029941 Eid3Q3V124 375 aa17.44■□□□□ 0.38
Pdlim5-201ENSMUST00000029941 Aplp2Q06335 707 aa17.38■□□□□ 0.37
Pdlim5-201ENSMUST00000029941 Aebp2Q9Z248 504 aaKnown RBP17.36■□□□□ 0.37
Pdlim5-201ENSMUST00000029941 Eif5bQ05D44 1216 aaKnown RBP17.34■□□□□ 0.37
Pdlim5-201ENSMUST00000029941 Ccer2J3QPU5 274 aa17.3■□□□□ 0.36
Pdlim5-201ENSMUST00000029941 Fmn1Q05860 1466 aa17.28■□□□□ 0.36
Pdlim5-201ENSMUST00000029941 Setd5Q5XJV7 1441 aa17.28■□□□□ 0.36
Pdlim5-201ENSMUST00000029941 Cecr2E9Q2Z1 1453 aa17.28■□□□□ 0.36
Pdlim5-201ENSMUST00000029941 Anp32bQ9EST5 272 aaKnown RBP17.27■□□□□ 0.36
Pdlim5-201ENSMUST00000029941 Synj1Q8CHC4 1574 aa17.27■□□□□ 0.36
Pdlim5-201ENSMUST00000029941 Mapk8ip2Q9ERE9 830 aa17.26■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 CftrP26361 1476 aa17.26■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 BlmO88700 1416 aa17.24■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 Anp32aO35381 247 aa17.24■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 Rtl5Q5DTT4 599 aa17.24■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 Cep162Q6ZQ06 1403 aa17.23■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 Eea1Q8BL66 1411 aa17.23■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 Gm38655A0A286YDK6 273 aa17.22■□□□□ 0.35
Pdlim5-201ENSMUST00000029941 1700123L14RikQ3V2K7 440 aa17.15■□□□□ 0.34
Pdlim5-201ENSMUST00000029941 Kif15Q6P9L6 1387 aa17.14■□□□□ 0.34
Pdlim5-201ENSMUST00000029941 NeflP08551 543 aa17.14■□□□□ 0.33
Pdlim5-201ENSMUST00000029941 Cttnbp2B9EJA2 1648 aa17.09■□□□□ 0.33
Pdlim5-201ENSMUST00000029941 Ccdc18Q640L5 1455 aa17.07■□□□□ 0.32
Pdlim5-201ENSMUST00000029941 Ubl4bQ9CQ84 188 aa17.07■□□□□ 0.32
Pdlim5-201ENSMUST00000029941 Rapgef2Q8CHG7 1496 aa17.05■□□□□ 0.32
Pdlim5-201ENSMUST00000029941 Ercc6F8VPZ5 1481 aa17.05■□□□□ 0.32
Pdlim5-201ENSMUST00000029941 Smarca4Q3TKT4 1613 aaKnown RBP17.01■□□□□ 0.31
Pdlim5-201ENSMUST00000029941 Calr4Q3TQS0 420 aa16.99■□□□□ 0.31
Pdlim5-201ENSMUST00000029941 Ttbk1Q6PCN3 1308 aa16.99■□□□□ 0.31
Pdlim5-201ENSMUST00000029941 Chic2Q9D9G3 165 aa16.99■□□□□ 0.31
Pdlim5-201ENSMUST00000029941 Amer1Q7TS75 1132 aa16.97■□□□□ 0.31
Pdlim5-201ENSMUST00000029941 Pds5bQ4VA53 1446 aaKnown RBP16.96■□□□□ 0.31
Pdlim5-201ENSMUST00000029941 Os9Q8K2C7 672 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 119.1 ms