RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 Ube2uB1AUC4 352 aa17.61■□□□□ 0.41
Chd1-201ENSMUST00000024620 Rpgrip1Q9EPQ2 1331 aa17.61■□□□□ 0.41
Chd1-201ENSMUST00000024620 DiexfQ8BTT6 772 aaKnown RBP17.48■□□□□ 0.39
Chd1-201ENSMUST00000024620 Ttbk1Q6PCN3 1308 aa16.89■□□□□ 0.29
Chd1-201ENSMUST00000024620 Rhox8Q6VSS7 320 aa16.75■□□□□ 0.27
Chd1-201ENSMUST00000024620 Plppr3Q7TPB0 716 aa16.71■□□□□ 0.26
Chd1-201ENSMUST00000024620 Myt1Q8CFC2 1127 aa16.69■□□□□ 0.26
Chd1-201ENSMUST00000024620 Pcgf6Q99NA9 353 aa16.6■□□□□ 0.25
Chd1-201ENSMUST00000024620 CatipB9EKE5 520 aa16.52■□□□□ 0.24
Chd1-201ENSMUST00000024620 Acin1Q9JIX8 1338 aaKnown RBP16.4■□□□□ 0.22
Chd1-201ENSMUST00000024620 Las1lA2BE28 776 aaKnown RBP16.29■□□□□ 0.2
Chd1-201ENSMUST00000024620 Ehmt2Q9Z148 1263 aaKnown RBP16.26■□□□□ 0.19
Chd1-201ENSMUST00000024620 Rtl1Q7M732 1744 aa16.23■□□□□ 0.19
Chd1-201ENSMUST00000024620 ArxO35085 564 aa16.22■□□□□ 0.19
Chd1-201ENSMUST00000024620 CenpbP27790 599 aa16.15■□□□□ 0.18
Chd1-201ENSMUST00000024620 Amer1Q7TS75 1132 aa16.1■□□□□ 0.17
Chd1-201ENSMUST00000024620 Ccdc180J3QNE4 1664 aa16.03■□□□□ 0.16
Chd1-201ENSMUST00000024620 Trim41Q5NCC3 630 aa15.85■□□□□ 0.13
Chd1-201ENSMUST00000024620 Bcl11aQ9QYE3 773 aa15.83■□□□□ 0.13
Chd1-201ENSMUST00000024620 Neurod1Q60867 357 aa15.77■□□□□ 0.12
Chd1-201ENSMUST00000024620 1700123L14RikQ3V2K7 440 aa15.67■□□□□ 0.1
Chd1-201ENSMUST00000024620 Dcaf1Q80TR8 1506 aa15.64■□□□□ 0.09
Chd1-201ENSMUST00000024620 Aplp2Q06335 707 aa15.53■□□□□ 0.08
Chd1-201ENSMUST00000024620 Anks4bQ8K3X6 423 aa15.51■□□□□ 0.07
Chd1-201ENSMUST00000024620 Supt5hO55201 1082 aaKnown RBP15.46■□□□□ 0.07
Chd1-201ENSMUST00000024620 Cngb1E1AZ71 1325 aa15.4■□□□□ 0.06
Chd1-201ENSMUST00000024620 UbtfP25976 765 aaKnown RBP15.35■□□□□ 0.05
Chd1-201ENSMUST00000024620 Kcna4Q61423 654 aa15.34■□□□□ 0.05
Chd1-201ENSMUST00000024620 PrkcshO08795 521 aa15.32■□□□□ 0.04
Chd1-201ENSMUST00000024620 Slc4a1apE9PX68 744 aa15.29■□□□□ 0.04
Chd1-201ENSMUST00000024620 Gtf3c5Q8R2T8 520 aa15.26■□□□□ 0.03
Chd1-201ENSMUST00000024620 Arid3aQ62431 601 aa15.2■□□□□ 0.02
Chd1-201ENSMUST00000024620 Csrnp3P59055 597 aa15.2■□□□□ 0.02
Chd1-201ENSMUST00000024620 Rsph4aQ8BYM7 716 aa15.2■□□□□ 0.02
Chd1-201ENSMUST00000024620 Q8BT18 775 aa15.17■□□□□ 0.02
Chd1-201ENSMUST00000024620 Gm35339A0A140LHH9 1649 aa15.14■□□□□ 0.01
Chd1-201ENSMUST00000024620 Ppargc1bQ8VHJ7 1014 aa15.12■□□□□ 0.01
Chd1-201ENSMUST00000024620 Ncbp3Q8BZR9 615 aaKnown RBP15.11■□□□□ 0.01
Chd1-201ENSMUST00000024620 TimelessQ9R1X4 1197 aa15.05■□□□□ -0
Chd1-201ENSMUST00000024620 Eif5bQ05D44 1216 aaKnown RBP15.02□□□□□ -0.01
Chd1-201ENSMUST00000024620 BccipQ9CWI3 316 aa15.02□□□□□ -0.01
Chd1-201ENSMUST00000024620 Zcchc6Q5BLK4 1491 aaKnown RBP15.02□□□□□ -0.01
Chd1-201ENSMUST00000024620 Prdm16A2A935 1275 aa15.01□□□□□ -0.01
Chd1-201ENSMUST00000024620 HrcG5E8J6 738 aa15.01□□□□□ -0.01
Chd1-201ENSMUST00000024620 Abcc9P70170 1546 aa14.92□□□□□ -0.02
Chd1-201ENSMUST00000024620 NischQ80TM9 1593 aa14.9□□□□□ -0.02
Chd1-201ENSMUST00000024620 Rtl5Q5DTT4 599 aa14.87□□□□□ -0.03
Chd1-201ENSMUST00000024620 Gm38655A0A286YDK6 273 aa14.82□□□□□ -0.04
Chd1-201ENSMUST00000024620 Taok2Q6ZQ29 1240 aa14.81□□□□□ -0.04
Chd1-201ENSMUST00000024620 NefmP08553 848 aa14.79□□□□□ -0.04
Chd1-201ENSMUST00000024620 Dnajc5bQ9CQ94 199 aa14.78□□□□□ -0.04
Chd1-201ENSMUST00000024620 Pknox2Q8BG99 474 aa14.77□□□□□ -0.04
Chd1-201ENSMUST00000024620 Mapk8ip2Q9ERE9 830 aa14.75□□□□□ -0.05
Chd1-201ENSMUST00000024620 NrdcQ8BHG1 1161 aa14.74□□□□□ -0.05
Chd1-201ENSMUST00000024620 Fgd1P52734 960 aa14.73□□□□□ -0.05
Chd1-201ENSMUST00000024620 Dnajc5P60904 198 aa14.73□□□□□ -0.05
Chd1-201ENSMUST00000024620 Sall2Q9QX96 1004 aa14.72□□□□□ -0.05
Chd1-201ENSMUST00000024620 Cdk11bP24788 784 aaKnown RBP14.69□□□□□ -0.06
Chd1-201ENSMUST00000024620 Vsig10D3YX43 558 aa14.68□□□□□ -0.06
Chd1-201ENSMUST00000024620 Fam71e1A1L3C1 212 aa14.66□□□□□ -0.06
Chd1-201ENSMUST00000024620 Prdm10Q3UTQ7 1184 aa14.62□□□□□ -0.07
Chd1-201ENSMUST00000024620 Ifnlr1Q8CGK5 535 aa14.59□□□□□ -0.07
Chd1-201ENSMUST00000024620 Scaf1Q5U4C3 1256 aaKnown RBP14.59□□□□□ -0.07
Chd1-201ENSMUST00000024620 Hdac5Q9Z2V6 1113 aa14.55□□□□□ -0.08
Chd1-201ENSMUST00000024620 Nop58Q6DFW4 536 aaKnown RBP14.53□□□□□ -0.08
Chd1-201ENSMUST00000024620 4930567H17RikQ3V0K5 233 aa14.51□□□□□ -0.09
Chd1-201ENSMUST00000024620 Ccdc9Q8VC31 543 aaKnown RBP14.5□□□□□ -0.09
Chd1-201ENSMUST00000024620 Ube2q2Q8K2Z8 378 aa14.5□□□□□ -0.09
Chd1-201ENSMUST00000024620 Tnnt3Q9QZ47 272 aa14.48□□□□□ -0.09
Chd1-201ENSMUST00000024620 Pelp1Q9DBD5 1123 aaKnown RBP14.48□□□□□ -0.09
Chd1-201ENSMUST00000024620 Zeb1Q64318 1117 aa14.46□□□□□ -0.09
Chd1-201ENSMUST00000024620 Znf316Q6PGE4 1016 aa14.45□□□□□ -0.1
Chd1-201ENSMUST00000024620 ScribQ80U72 1612 aa14.38□□□□□ -0.11
Chd1-201ENSMUST00000024620 ClspnQ80YR7 1315 aa14.38□□□□□ -0.11
Chd1-201ENSMUST00000024620 Anp32aO35381 247 aa14.36□□□□□ -0.11
Chd1-201ENSMUST00000024620 Znf326O88291 580 aa14.34□□□□□ -0.11
Chd1-201ENSMUST00000024620 Samd1D3YXK1 519 aa14.3□□□□□ -0.12
Chd1-201ENSMUST00000024620 Gtf3c3Q3TMP1 882 aa14.3□□□□□ -0.12
Chd1-201ENSMUST00000024620 Ripply1Q2WG77 201 aa14.26□□□□□ -0.13
Chd1-201ENSMUST00000024620 Fbxo3Q9DC63 480 aa14.22□□□□□ -0.13
Chd1-201ENSMUST00000024620 Upf2A2AT37 1269 aaKnown RBP14.2□□□□□ -0.14
Chd1-201ENSMUST00000024620 Igsf3Q6ZQA6 1194 aa14.2□□□□□ -0.14
Chd1-201ENSMUST00000024620 Ipo4Q8VI75 1082 aa14.18□□□□□ -0.14
Chd1-201ENSMUST00000024620 Irx3P81067 507 aa14.16□□□□□ -0.14
Chd1-201ENSMUST00000024620 Irx6Q9ER75 438 aa14.16□□□□□ -0.14
Chd1-201ENSMUST00000024620 Plcd4Q8K3R3 807 aa14.15□□□□□ -0.14
Chd1-201ENSMUST00000024620 Npm2Q80W85 207 aa14.14□□□□□ -0.15
Chd1-201ENSMUST00000024620 Cep164Q5DU05 1446 aa14.12□□□□□ -0.15
Chd1-201ENSMUST00000024620 Mier1Q5UAK0 511 aa14.1□□□□□ -0.15
Chd1-201ENSMUST00000024620 Skap1Q3UUV5 355 aa14.08□□□□□ -0.16
Chd1-201ENSMUST00000024620 Ccdc27Q3V036 639 aa14.08□□□□□ -0.16
Chd1-201ENSMUST00000024620 Ccdc136Q3TVA9 1136 aa14.07□□□□□ -0.16
Chd1-201ENSMUST00000024620 Os9Q8K2C7 672 aa14.06□□□□□ -0.16
Chd1-201ENSMUST00000024620 Abcc8B2RUS7 1588 aa14.06□□□□□ -0.16
Chd1-201ENSMUST00000024620 Hnrnpul2Q00PI9 745 aaKnown RBP14.06□□□□□ -0.16
Chd1-201ENSMUST00000024620 Aebp2Q9Z248 504 aaKnown RBP14.04□□□□□ -0.16
Chd1-201ENSMUST00000024620 SafbD3YXK2 937 aaKnown RBP14.04□□□□□ -0.16
Chd1-201ENSMUST00000024620 Zfp777B9EKF4 885 aa14.03□□□□□ -0.16
Chd1-201ENSMUST00000024620 Wdr66E9Q743 1299 aa14□□□□□ -0.17
Chd1-201ENSMUST00000024620 Zbtb7cQ8VCZ7 619 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms