RNA–Protein interactions for RNA: ENSMUST00000001700.6

Hoxc13-201, Transcript of Homeobox protein Hox-C13, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc13, Length 2,461 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc13-201ENSMUST00000001700 Rpgrip1Q9EPQ2 1331 aa39.12■■■■□ 3.85
Hoxc13-201ENSMUST00000001700 Acin1Q9JIX8 1338 aaKnown RBP37.63■■■■□ 3.62
Hoxc13-201ENSMUST00000001700 Pcgf6Q99NA9 353 aa37.44■■■■□ 3.58
Hoxc13-201ENSMUST00000001700 Rtl1Q7M732 1744 aa37.21■■■■□ 3.55
Hoxc13-201ENSMUST00000001700 Ccdc180J3QNE4 1664 aa37.06■■■■□ 3.52
Hoxc13-201ENSMUST00000001700 NischQ80TM9 1593 aa36.74■■■■□ 3.47
Hoxc13-201ENSMUST00000001700 Ehmt2Q9Z148 1263 aaKnown RBP36.36■■■■□ 3.41
Hoxc13-201ENSMUST00000001700 Rhox8Q6VSS7 320 aa36.28■■■■□ 3.4
Hoxc13-201ENSMUST00000001700 Neurod1Q60867 357 aa36.26■■■■□ 3.4
Hoxc13-201ENSMUST00000001700 Supt5hO55201 1082 aaKnown RBP36.13■■■■□ 3.37
Hoxc13-201ENSMUST00000001700 Trim41Q5NCC3 630 aa36.11■■■■□ 3.37
Hoxc13-201ENSMUST00000001700 Las1lA2BE28 776 aaKnown RBP36.06■■■■□ 3.36
Hoxc13-201ENSMUST00000001700 Gm35339A0A140LHH9 1649 aa35.99■■■■□ 3.35
Hoxc13-201ENSMUST00000001700 Dcaf1Q80TR8 1506 aa35.89■■■■□ 3.34
Hoxc13-201ENSMUST00000001700 Abcc9P70170 1546 aa35.74■■■■□ 3.31
Hoxc13-201ENSMUST00000001700 1700123L14RikQ3V2K7 440 aa35.62■■■■□ 3.29
Hoxc13-201ENSMUST00000001700 Myt1Q8CFC2 1127 aa35.62■■■■□ 3.29
Hoxc13-201ENSMUST00000001700 CenpbP27790 599 aa35.53■■■■□ 3.28
Hoxc13-201ENSMUST00000001700 Zcchc6Q5BLK4 1491 aaKnown RBP35.5■■■■□ 3.27
Hoxc13-201ENSMUST00000001700 DiexfQ8BTT6 772 aaKnown RBP35.19■■■■□ 3.22
Hoxc13-201ENSMUST00000001700 Csrnp3P59055 597 aa35.11■■■■□ 3.21
Hoxc13-201ENSMUST00000001700 HrcG5E8J6 738 aa35.07■■■■□ 3.2
Hoxc13-201ENSMUST00000001700 Anks4bQ8K3X6 423 aa35.01■■■■□ 3.2
Hoxc13-201ENSMUST00000001700 Abcc8B2RUS7 1588 aa34.74■■■■□ 3.15
Hoxc13-201ENSMUST00000001700 Aplp2Q06335 707 aa34.69■■■■□ 3.14
Hoxc13-201ENSMUST00000001700 Bcl11aQ9QYE3 773 aa34.67■■■■□ 3.14
Hoxc13-201ENSMUST00000001700 Zeb1Q64318 1117 aa34.64■■■■□ 3.14
Hoxc13-201ENSMUST00000001700 Cngb1E1AZ71 1325 aa34.6■■■■□ 3.13
Hoxc13-201ENSMUST00000001700 Sall2Q9QX96 1004 aa34.54■■■■□ 3.12
Hoxc13-201ENSMUST00000001700 NefmP08553 848 aa34.11■■■■□ 3.05
Hoxc13-201ENSMUST00000001700 Gm38655A0A286YDK6 273 aa34.01■■■■□ 3.04
Hoxc13-201ENSMUST00000001700 Cdk11bP24788 784 aaKnown RBP33.9■■■■□ 3.02
Hoxc13-201ENSMUST00000001700 PrkcshO08795 521 aa33.83■■■■□ 3.01
Hoxc13-201ENSMUST00000001700 Nop58Q6DFW4 536 aaKnown RBP33.73■■■□□ 2.99
Hoxc13-201ENSMUST00000001700 Mier1Q5UAK0 511 aa33.63■■■□□ 2.97
Hoxc13-201ENSMUST00000001700 Fam71e1A1L3C1 212 aa33.6■■■□□ 2.97
Hoxc13-201ENSMUST00000001700 Ccdc136Q3TVA9 1136 aa33.46■■■□□ 2.95
Hoxc13-201ENSMUST00000001700 Wdr66E9Q743 1299 aa33.45■■■□□ 2.95
Hoxc13-201ENSMUST00000001700 Ifnlr1Q8CGK5 535 aa33.43■■■□□ 2.94
Hoxc13-201ENSMUST00000001700 Aebp2Q9Z248 504 aaKnown RBP33.43■■■□□ 2.94
Hoxc13-201ENSMUST00000001700 Cep164Q5DU05 1446 aa33.42■■■□□ 2.94
Hoxc13-201ENSMUST00000001700 ClspnQ80YR7 1315 aa33.3■■■□□ 2.92
Hoxc13-201ENSMUST00000001700 Amer1Q7TS75 1132 aa33.21■■■□□ 2.91
Hoxc13-201ENSMUST00000001700 Mapk8ip2Q9ERE9 830 aa33.13■■■□□ 2.89
Hoxc13-201ENSMUST00000001700 SafbD3YXK2 937 aaKnown RBP33.03■■■□□ 2.88
Hoxc13-201ENSMUST00000001700 Ppargc1bQ8VHJ7 1014 aa33.03■■■□□ 2.88
Hoxc13-201ENSMUST00000001700 Hnrnpul2Q00PI9 745 aaKnown RBP32.89■■■□□ 2.86
Hoxc13-201ENSMUST00000001700 ScribQ80U72 1612 aa32.87■■■□□ 2.85
Hoxc13-201ENSMUST00000001700 Tnnt3Q9QZ47 272 aa32.74■■■□□ 2.83
Hoxc13-201ENSMUST00000001700 Rtl5Q5DTT4 599 aa32.61■■■□□ 2.81
Hoxc13-201ENSMUST00000001700 Anp32aO35381 247 aa32.58■■■□□ 2.81
Hoxc13-201ENSMUST00000001700 Gab3Q8BSM5 595 aa32.53■■■□□ 2.8
Hoxc13-201ENSMUST00000001700 Hdac5Q9Z2V6 1113 aa32.5■■■□□ 2.79
Hoxc13-201ENSMUST00000001700 Rb1cc1Q9ESK9 1588 aa32.36■■■□□ 2.77
Hoxc13-201ENSMUST00000001700 TonslQ6NZL6 1363 aa32.33■■■□□ 2.77
Hoxc13-201ENSMUST00000001700 Chic1Q8CBW7 227 aa32.3■■■□□ 2.76
Hoxc13-201ENSMUST00000001700 Rsf1E9PWW9 1441 aaKnown RBP32.3■■■□□ 2.76
Hoxc13-201ENSMUST00000001700 UbtfP25976 765 aaKnown RBP32.24■■■□□ 2.75
Hoxc13-201ENSMUST00000001700 Ap3b1Q9Z1T1 1105 aa32.23■■■□□ 2.75
Hoxc13-201ENSMUST00000001700 Pelp1Q9DBD5 1123 aaKnown RBP32.22■■■□□ 2.75
Hoxc13-201ENSMUST00000001700 Nolc1E9Q5C9 702 aaKnown RBP32.19■■■□□ 2.74
Hoxc13-201ENSMUST00000001700 Fgd1P52734 960 aa32.14■■■□□ 2.73
Hoxc13-201ENSMUST00000001700 Kdm5dQ62240 1548 aa32.04■■■□□ 2.72
Hoxc13-201ENSMUST00000001700 Baz1aO88379 1555 aa31.99■■■□□ 2.71
Hoxc13-201ENSMUST00000001700 Znf710Q3U288 666 aa31.98■■■□□ 2.71
Hoxc13-201ENSMUST00000001700 Supt16hQ920B9 1047 aa31.98■■■□□ 2.71
Hoxc13-201ENSMUST00000001700 Pknox2Q8BG99 474 aa31.92■■■□□ 2.7
Hoxc13-201ENSMUST00000001700 NrdcQ8BHG1 1161 aa31.9■■■□□ 2.7
Hoxc13-201ENSMUST00000001700 Ttbk1Q6PCN3 1308 aa31.87■■■□□ 2.69
Hoxc13-201ENSMUST00000001700 Gtf3c3Q3TMP1 882 aa31.87■■■□□ 2.69
Hoxc13-201ENSMUST00000001700 Upf2A2AT37 1269 aaKnown RBP31.84■■■□□ 2.69
Hoxc13-201ENSMUST00000001700 Calr4Q3TQS0 420 aa31.79■■■□□ 2.68
Hoxc13-201ENSMUST00000001700 Il27Q8K3I6 234 aa31.78■■■□□ 2.68
Hoxc13-201ENSMUST00000001700 Ccdc88bQ4QRL3 1481 aa31.77■■■□□ 2.68
Hoxc13-201ENSMUST00000001700 NacadQ5SWP3 1504 aa31.77■■■□□ 2.68
Hoxc13-201ENSMUST00000001700 Plcd4Q8K3R3 807 aa31.74■■■□□ 2.67
Hoxc13-201ENSMUST00000001700 Stra8P70278 393 aa31.62■■■□□ 2.65
Hoxc13-201ENSMUST00000001700 Ccdc27Q3V036 639 aa31.58■■■□□ 2.65
Hoxc13-201ENSMUST00000001700 Irx3P81067 507 aa31.55■■■□□ 2.64
Hoxc13-201ENSMUST00000001700 Ccdc9Q8VC31 543 aaKnown RBP31.5■■■□□ 2.63
Hoxc13-201ENSMUST00000001700 Rpap1Q80TE0 1409 aa31.48■■■□□ 2.63
Hoxc13-201ENSMUST00000001700 Smarca2Q6DIC0 1577 aa31.47■■■□□ 2.63
Hoxc13-201ENSMUST00000001700 Ppp4r2Q0VGB7 417 aa31.43■■■□□ 2.62
Hoxc13-201ENSMUST00000001700 Pak3Q61036 559 aa31.39■■■□□ 2.62
Hoxc13-201ENSMUST00000001700 Wdr43Q6ZQL4 677 aaKnown RBP31.36■■■□□ 2.61
Hoxc13-201ENSMUST00000001700 Washc2Q6PGL7 1334 aa31.32■■■□□ 2.6
Hoxc13-201ENSMUST00000001700 Ipo4Q8VI75 1082 aa31.27■■■□□ 2.6
Hoxc13-201ENSMUST00000001700 Ncapd3Q6ZQK0 1506 aa31.26■■■□□ 2.6
Hoxc13-201ENSMUST00000001700 Liat1Q810M6 228 aa31.24■■■□□ 2.59
Hoxc13-201ENSMUST00000001700 Egfem1Q8C088 590 aa31.23■■■□□ 2.59
Hoxc13-201ENSMUST00000001700 Golga3P55937 1487 aa31.21■■■□□ 2.59
Hoxc13-201ENSMUST00000001700 Hsp90aa1P07901 733 aaKnown RBP31.18■■■□□ 2.58
Hoxc13-201ENSMUST00000001700 Sycp2Q9CUU3 1500 aa31.15■■■□□ 2.58
Hoxc13-201ENSMUST00000001700 Eid3Q3V124 375 aa31.13■■■□□ 2.57
Hoxc13-201ENSMUST00000001700 Rapgef2Q8CHG7 1496 aa31■■■□□ 2.55
Hoxc13-201ENSMUST00000001700 Ipo9Q91YE6 1041 aa30.97■■■□□ 2.55
Hoxc13-201ENSMUST00000001700 Kcnn1Q9EQR3 537 aa30.93■■■□□ 2.54
Hoxc13-201ENSMUST00000001700 Ccer2J3QPU5 274 aa30.93■■■□□ 2.54
Hoxc13-201ENSMUST00000001700 Plekhg3Q4VAC9 1341 aa30.9■■■□□ 2.54
Hoxc13-201ENSMUST00000001700 Kdm5bQ80Y84 1544 aa30.89■■■□□ 2.54
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms