RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 GRK1Q15835 563 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MICAQ29983 383 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SMTNL2Q2TAL5 461 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 GPR158Q5T848 1215 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CACHD1Q5VU97 1274 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PM20D1Q6GTS8 502 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TMEM81Q6P7N7 255 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CUZD1Q86UP6 607 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SAMD14Q8IZD0 417 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 DEPDC4Q8N2C3 294 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 LILRB2Q8N423 598 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ATAD1Q8NBU5 361 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 FRMD6Q96NE9 622 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CITED4Q96RK1 184 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ACOX2Q99424 681 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SOSTQ9BQB4 213 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF277Q9NRM2 450 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 LYARQ9NX58 379 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 DCAF16Q9NXF7 216 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZIM2Q9NZV7 527 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CCDC167Q9P0B6 97 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SLC17A6Q9P2U8 582 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 DTX4Q9Y2E6 619 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PCDHB5Q9Y5E4 795 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF541Q9H0D2 1346 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ANKRD28O15084 1053 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 INPP4BO15327 924 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CACNG3O60359 315 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 STBD1O95210 358 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ANXA6P08133 673 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ALOX12P18054 663 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MYL9P24844 172 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SFNP31947 248 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 JAK3P52333 1124 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CDH8P55286 799 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 BTG1P62324 171 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 NFIAQ12857 509 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CDH17Q12864 832 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF79Q15937 498 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 IMPG1Q17R60 797 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SETMARQ53H47 684 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RNLSQ5VYX0 342 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RAP1GAP2Q684P5 730 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 LAIR1Q6GTX8 287 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 DENND1BQ6P3S1 775 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF704Q6ZNC4 412 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 RNF165Q6ZSG1 346 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 DPP9Q86TI2 863 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 AMIGO1Q86WK6 493 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MICU2Q8IYU8 434 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 YIPF7Q8N8F6 280 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 CDYL2Q8N8U2 506 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 C9orf43Q8TAL5 461 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 SETD7Q8WTS6 366 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 HTR3CQ8WXA8 447 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TFAP2BQ92481 460 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PMEPA1Q969W9 287 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 NXPE3Q969Y0 559 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MSLNLQ96KJ4 702 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TSNARE1Q96NA8 513 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PRDM12Q9H4Q4 367 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 TASP1Q9H6P5 420 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PLEKHA5Q9HAU0 1116 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 ZBTB20Q9HC78 741 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 FAM49BQ9NUQ9 324 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 MAP3K20Q9NYL2 800 aaKnown RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 LEF1Q9UJU2 399 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-210ENST00000494667 HES2Q9Y543 173 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PCDHB14Q9Y5E9 798 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 UBIAD1Q9Y5Z9 338 aa4.73□□□□□ -1.65
PRKD3-210ENST00000494667 PDCD11Q14690 1871 aaKnown RBP4.72□□□□□ -1.65
PRKD3-210ENST00000494667 LINC00854A0A1B0GVQ3 168 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 KPNA6O60684 536 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 HCN1O60741 890 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 AP2A1O95782 977 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 SEMG1P04279 462 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 PSAPP07602 524 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 CTPS1P17812 591 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 TNNI3P19429 210 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 POU3F3P20264 500 aaPredicted RBP4.72□□□□□ -1.65
PRKD3-210ENST00000494667 TM4SF1P30408 202 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 PRKAR1BP31321 381 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 YWHABP31946 246 aaKnown RBP4.72□□□□□ -1.65
PRKD3-210ENST00000494667 SOX6P35712 828 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 LIPAP38571 399 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 ASPAP45381 313 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 CCR10P46092 362 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 HAAOP46952 286 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 TPMTP51580 245 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 CLCN3P51790 818 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 CLCNKAP51800 687 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 CLDN20P56880 219 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 RAB10P61026 200 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 RUNX1T1Q06455 604 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 SCN1BQ07699 218 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 ITPK1Q13572 414 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 CARTPTQ16568 116 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 TIMM50Q3ZCQ8 353 aa4.72□□□□□ -1.65
PRKD3-210ENST00000494667 TYW3Q6IPR3 259 aaKnown RBP4.72□□□□□ -1.65
PRKD3-210ENST00000494667 CDH24Q86UP0 819 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms