RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A CDC60P26637 1090 aaKnown RBP17.81■□□□□ 0.44
TRN1tP(UGG)A IME2P32581 645 aa17.81■□□□□ 0.44
TRN1tP(UGG)A DJP1P40564 432 aa17.81■□□□□ 0.44
TRN1tP(UGG)A SPR3P41901 512 aa17.81■□□□□ 0.44
TRN1tP(UGG)A FMS1P50264 508 aa17.81■□□□□ 0.44
TRN1tP(UGG)A GET3Q12154 354 aaKnown RBP17.81■□□□□ 0.44
TRN1tP(UGG)A MAL33P38157 468 aa17.8■□□□□ 0.44
TRN1tP(UGG)A TMA64Q04600 565 aaKnown RBP17.8■□□□□ 0.44
TRN1tP(UGG)A DCS2Q12123 353 aa17.8■□□□□ 0.44
TRN1tP(UGG)A CEX1Q12453 761 aa17.8■□□□□ 0.44
TRN1tP(UGG)A RDS1P25611 832 aa17.79■□□□□ 0.44
TRN1tP(UGG)A PWP2P25635 923 aaKnown RBP17.79■□□□□ 0.44
TRN1tP(UGG)A ASF1P32447 279 aa17.79■□□□□ 0.44
TRN1tP(UGG)A TGL1P34163 548 aa17.79■□□□□ 0.44
TRN1tP(UGG)A SAS3P34218 831 aa17.79■□□□□ 0.44
TRN1tP(UGG)A FKS1P38631 1876 aaKnown RBP17.78■□□□□ 0.44
TRN1tP(UGG)A YKR018CP36114 725 aa17.78■□□□□ 0.44
TRN1tP(UGG)A BDH2P39713 417 aa17.78■□□□□ 0.44
TRN1tP(UGG)A CSC1Q06538 782 aa17.78■□□□□ 0.44
TRN1tP(UGG)A RKM4Q12504 494 aa17.78■□□□□ 0.44
TRN1tP(UGG)A PGI1P12709 554 aaKnown RBP17.77■□□□□ 0.44
TRN1tP(UGG)A UTR4P32626 227 aa17.77■□□□□ 0.44
TRN1tP(UGG)A HST1P53685 503 aa17.77■□□□□ 0.44
TRN1tP(UGG)A BNI5P53890 448 aaKnown RBP17.77■□□□□ 0.44
TRN1tP(UGG)A EUG1P32474 517 aa17.76■□□□□ 0.43
TRN1tP(UGG)A GPB2P39717 880 aa17.76■□□□□ 0.43
TRN1tP(UGG)A SPH1Q06160 661 aa17.76■□□□□ 0.43
TRN1tP(UGG)A PEX19Q07418 342 aa17.76■□□□□ 0.43
TRN1tP(UGG)A PHR1P05066 565 aaKnown RBP RIP-Chip data17.75■□□□□ 0.43not detected
TRN1tP(UGG)A PKC1P24583 1151 aa17.75■□□□□ 0.43
TRN1tP(UGG)A SHP1P34223 423 aa17.75■□□□□ 0.43
TRN1tP(UGG)A PAN5P38787 379 aa17.75■□□□□ 0.43
TRN1tP(UGG)A SGD1Q06132 899 aa17.75■□□□□ 0.43
TRN1tP(UGG)A OXR1Q08952 273 aa17.75■□□□□ 0.43
TRN1tP(UGG)A ARP8Q12386 881 aaKnown RBP RIP-Chip data17.75■□□□□ 0.43not detected
TRN1tP(UGG)A NBL1Q3E7Y6 73 aa17.75■□□□□ 0.43
TRN1tP(UGG)A SUL1P38359 859 aa17.74■□□□□ 0.43
TRN1tP(UGG)A DUS3Q06053 668 aaKnown RBP17.74■□□□□ 0.43
TRN1tP(UGG)A MBR1P23493 339 aa17.73■□□□□ 0.43
TRN1tP(UGG)A DSE4P53753 1117 aa17.73■□□□□ 0.43
TRN1tP(UGG)A YAF9P53930 226 aa17.73■□□□□ 0.43
TRN1tP(UGG)A YLR225CQ05948 407 aaKnown RBP17.73■□□□□ 0.43
TRN1tP(UGG)A TY3A-GQ12173 290 aa17.73■□□□□ 0.43
TRN1tP(UGG)A SRF1Q12516 437 aa17.73■□□□□ 0.43
TRN1tP(UGG)A TY3A-IQ99219 290 aa17.73■□□□□ 0.43
TRN1tP(UGG)A THR4P16120 514 aaKnown RBP17.72■□□□□ 0.43
TRN1tP(UGG)A RGP1P16664 663 aa17.72■□□□□ 0.43
TRN1tP(UGG)A CIT3P43635 486 aa17.72■□□□□ 0.43
TRN1tP(UGG)A LIF1P53150 421 aa17.72■□□□□ 0.43
TRN1tP(UGG)A RET3P53600 189 aa17.72■□□□□ 0.43
TRN1tP(UGG)A TIP41Q12199 356 aa17.72■□□□□ 0.43
TRN1tP(UGG)A HXK1P04806 485 aaKnown RBP17.71■□□□□ 0.43
TRN1tP(UGG)A UGA4P32837 571 aa17.71■□□□□ 0.43
TRN1tP(UGG)A ATG1P53104 897 aa17.71■□□□□ 0.43
TRN1tP(UGG)A YGR273CP53329 174 aa17.71■□□□□ 0.43
TRN1tP(UGG)A TRS120Q04183 1289 aa17.71■□□□□ 0.43
TRN1tP(UGG)A CSM3Q04659 317 aa17.71■□□□□ 0.43
TRN1tP(UGG)A GUD1Q07729 489 aa17.71■□□□□ 0.43
TRN1tP(UGG)A ECM29P38737 1868 aa17.71■□□□□ 0.43
TRN1tP(UGG)A MCR1P36060 302 aaKnown RBP17.7■□□□□ 0.42
TRN1tP(UGG)A HYR1P40581 163 aaKnown RBP17.7■□□□□ 0.42
TRN1tP(UGG)A YGR125WP53273 1036 aa17.7■□□□□ 0.42
TRN1tP(UGG)A FAR11P53917 953 aa17.7■□□□□ 0.42
TRN1tP(UGG)A AIM33Q04516 312 aa17.7■□□□□ 0.42
TRN1tP(UGG)A DUS4Q06063 367 aa17.7■□□□□ 0.42
TRN1tP(UGG)A YOR296WQ08748 1289 aa17.7■□□□□ 0.42
TRN1tP(UGG)A CDC19P00549 500 aaKnown RBP17.69■□□□□ 0.42
TRN1tP(UGG)A EAF7P53911 425 aaKnown RBP17.69■□□□□ 0.42
TRN1tP(UGG)A EIS1Q05050 843 aaKnown RBP17.69■□□□□ 0.42
TRN1tP(UGG)A STT3P39007 718 aaKnown RBP17.68■□□□□ 0.42
TRN1tP(UGG)A PTC5Q12511 572 aa17.68■□□□□ 0.42
TRN1tP(UGG)A SES1P07284 462 aaKnown RBP17.67■□□□□ 0.42
TRN1tP(UGG)A SRO9P25567 434 aaKnown RBP17.67■□□□□ 0.42
TRN1tP(UGG)A URA1P28272 314 aaPredicted RBP17.67■□□□□ 0.42
TRN1tP(UGG)A SRP40P32583 406 aaPredicted RBP17.67■□□□□ 0.42
TRN1tP(UGG)A SLK19Q08581 821 aaKnown RBP17.67■□□□□ 0.42
TRN1tP(UGG)A KEX1P09620 729 aa17.66■□□□□ 0.42
TRN1tP(UGG)A ALG1P16661 449 aa17.66■□□□□ 0.42
TRN1tP(UGG)A MSP1P28737 362 aa17.66■□□□□ 0.42
TRN1tP(UGG)A OYE2Q03558 400 aaKnown RBP17.66■□□□□ 0.42
TRN1tP(UGG)A FRS2P15625 503 aaKnown RBP17.65■□□□□ 0.42
TRN1tP(UGG)A GAA1P39012 614 aa17.65■□□□□ 0.42
TRN1tP(UGG)A CIR1P42940 261 aa17.65■□□□□ 0.42
TRN1tP(UGG)A CTR1P49573 406 aa17.65■□□□□ 0.42
TRN1tP(UGG)A HAP5Q02516 242 aa17.65■□□□□ 0.42
TRN1tP(UGG)A SLD5Q03406 294 aa17.65■□□□□ 0.42
TRN1tP(UGG)A BUL2Q03758 920 aaKnown RBP17.65■□□□□ 0.42
TRN1tP(UGG)A ARP6Q12509 438 aa17.65■□□□□ 0.42
TRN1tP(UGG)A GSY1P23337 708 aa17.64■□□□□ 0.41
TRN1tP(UGG)A ORC6P38826 435 aa17.64■□□□□ 0.41
TRN1tP(UGG)A COG8Q04632 607 aa17.64■□□□□ 0.41
TRN1tP(UGG)A ERP3Q12403 225 aa17.64■□□□□ 0.41
TRN1tP(UGG)A ILV1P00927 576 aaKnown RBP17.63■□□□□ 0.41
TRN1tP(UGG)A TUF1P02992 437 aaKnown RBP17.63■□□□□ 0.41
TRN1tP(UGG)A ATG32P40458 529 aa17.63■□□□□ 0.41
TRN1tP(UGG)A NCS6P53088 359 aa17.63■□□□□ 0.41
TRN1tP(UGG)A SDA1P53313 767 aaKnown RBP17.63■□□□□ 0.41
TRN1tP(UGG)A RTC4P53850 401 aa17.63■□□□□ 0.41
TRN1tP(UGG)A YLR326WQ06170 240 aaKnown RBP17.63■□□□□ 0.41
TRN1tP(UGG)A CCT5P40413 562 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms