RNA–Protein interactions for RNA: YPL138C

SPP1, Transcript of Subunit of COMPASS (Set1C), yeast

Gene SPP1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP1	YPL138C	DSE3	Q08729	430 aa		13.42	□□□□□ -0.26
SPP1	YPL138C	TKL1	P23254	680 aa	Known RBP	13.41	□□□□□ -0.26
SPP1	YPL138C	NOC2	P39744	710 aa	Known RBP	13.41	□□□□□ -0.26
SPP1	YPL138C	FMS1	P50264	508 aa		13.41	□□□□□ -0.26
SPP1	YPL138C	EST2	Q06163	884 aa		13.41	□□□□□ -0.26
SPP1	YPL138C	REG2	P38232	338 aa		13.4	□□□□□ -0.26
SPP1	YPL138C	CLF1	Q12309	687 aa	Predicted RBP	13.4	□□□□□ -0.26
SPP1	YPL138C	PDC1	P06169	563 aa	Known RBP	13.39	□□□□□ -0.27
SPP1	YPL138C	UGA4	P32837	571 aa		13.39	□□□□□ -0.27
SPP1	YPL138C	AIM9	P40053	627 aa	Known RBP	13.39	□□□□□ -0.27
SPP1	YPL138C	ISA1	Q07821	250 aa	Predicted RBP	13.39	□□□□□ -0.27
SPP1	YPL138C	ISW2	Q08773	1120 aa		13.39	□□□□□ -0.27
SPP1	YPL138C	POX1	P13711	748 aa		13.38	□□□□□ -0.27
SPP1	YPL138C	DLD1	P32891	587 aa		13.38	□□□□□ -0.27
SPP1	YPL138C	ASE1	P50275	885 aa		13.38	□□□□□ -0.27
SPP1	YPL138C	YVH1	Q02256	364 aa	Known RBP	13.38	□□□□□ -0.27
SPP1	YPL138C	MCM4	P30665	933 aa	Known RBP	13.37	□□□□□ -0.27
SPP1	YPL138C	TFC4	P33339	1025 aa		13.37	□□□□□ -0.27
SPP1	YPL138C	TRM11	Q12463	433 aa		13.37	□□□□□ -0.27
SPP1	YPL138C	RKM4	Q12504	494 aa		13.37	□□□□□ -0.27
SPP1	YPL138C	FLR1	P38124	548 aa		13.36	□□□□□ -0.27
SPP1	YPL138C	LIF1	P53150	421 aa		13.36	□□□□□ -0.27
SPP1	YPL138C	PTA1	Q01329	785 aa	Predicted RBP	13.36	□□□□□ -0.27
SPP1	YPL138C	HIP1	P06775	603 aa		13.35	□□□□□ -0.27
SPP1	YPL138C	MIP1	P15801	1254 aa		13.35	□□□□□ -0.27
SPP1	YPL138C	RNR3	P21672	869 aa	Known RBP	13.35	□□□□□ -0.27
SPP1	YPL138C	AKR1	P39010	764 aa		13.35	□□□□□ -0.27
SPP1	YPL138C	YKR023W	P36119	530 aa	Known RBP	13.34	□□□□□ -0.27
SPP1	YPL138C	PAN5	P38787	379 aa		13.34	□□□□□ -0.27
SPP1	YPL138C	LSB1	P53281	241 aa		13.34	□□□□□ -0.27
SPP1	YPL138C	ESF1	Q06344	628 aa	Known RBP	13.34	□□□□□ -0.27
SPP1	YPL138C	YDR524C-B	Q3E6R4	66 aa		13.34	□□□□□ -0.27
SPP1	YPL138C	TRL1	P09880	827 aa	Known RBP	13.33	□□□□□ -0.28
SPP1	YPL138C	WHI3	P34761	661 aa	Known RBP	13.33	□□□□□ -0.28
SPP1	YPL138C	DAK1	P54838	584 aa	Known RBP	13.33	□□□□□ -0.28
SPP1	YPL138C	WHI4	Q07655	649 aa	Known RBP	13.33	□□□□□ -0.28
SPP1	YPL138C	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.32	□□□□□ -0.28	not detected
SPP1	YPL138C	VID28	P40547	921 aa		13.32	□□□□□ -0.28
SPP1	YPL138C	ALG2	P43636	503 aa		13.32	□□□□□ -0.28
SPP1	YPL138C	FMP30	Q02883	468 aa		13.32	□□□□□ -0.28
SPP1	YPL138C	VIP1	Q06685	1146 aa	Known RBP	13.32	□□□□□ -0.28
SPP1	YPL138C	YFL040W	P43562	540 aa		13.31	□□□□□ -0.28
SPP1	YPL138C	MET6	P05694	767 aa	Known RBP	13.3	□□□□□ -0.28
SPP1	YPL138C	RPL8A	P17076	256 aa	Known RBP	13.3	□□□□□ -0.28
SPP1	YPL138C	SEC8	P32855	1065 aa		13.3	□□□□□ -0.28
SPP1	YPL138C	VPS53	P47061	822 aa		13.3	□□□□□ -0.28
SPP1	YPL138C	RPS7B	P48164	190 aa	Known RBP	13.3	□□□□□ -0.28
SPP1	YPL138C	FBP26	P32604	452 aa		13.29	□□□□□ -0.28
SPP1	YPL138C	YDR341C	Q05506	607 aa	Known RBP	13.29	□□□□□ -0.28
SPP1	YPL138C	OXR1	Q08952	273 aa		13.29	□□□□□ -0.28
SPP1	YPL138C	LDB19	Q12502	818 aa		13.29	□□□□□ -0.28
SPP1	YPL138C	ARP6	Q12509	438 aa		13.29	□□□□□ -0.28
SPP1	YPL138C	MAS2	P11914	482 aa		13.28	□□□□□ -0.28
SPP1	YPL138C	TPM1	P17536	199 aa	Known RBP	13.28	□□□□□ -0.28
SPP1	YPL138C	UBP11	P36026	717 aa		13.28	□□□□□ -0.28
SPP1	YPL138C	EPL1	P43572	832 aa		13.28	□□□□□ -0.28
SPP1	YPL138C	MOT1	P32333	1867 aa		13.27	□□□□□ -0.28
SPP1	YPL138C	TY1B-A	O13527	1196 aa	Known RBP	13.27	□□□□□ -0.29
SPP1	YPL138C	SUL1	P38359	859 aa		13.27	□□□□□ -0.29
SPP1	YPL138C	PCI8	P40512	444 aa		13.27	□□□□□ -0.29
SPP1	YPL138C	CIT1	P00890	479 aa		13.26	□□□□□ -0.29
SPP1	YPL138C	TIM23	P32897	222 aa		13.26	□□□□□ -0.29
SPP1	YPL138C	GRS1	P38088	690 aa	Known RBP	13.26	□□□□□ -0.29
SPP1	YPL138C	SPO22	P40511	975 aa		13.26	□□□□□ -0.29
SPP1	YPL138C	RTP1	Q12751	981 aa		13.26	□□□□□ -0.29
SPP1	YPL138C	SWI4	P25302	1093 aa	Known RBP	13.25	□□□□□ -0.29
SPP1	YPL138C	KIN82	P25341	720 aa		13.25	□□□□□ -0.29
SPP1	YPL138C	TPM2	P40414	161 aa		13.25	□□□□□ -0.29
SPP1	YPL138C	ORC4	P54791	529 aa		13.25	□□□□□ -0.29
SPP1	YPL138C	YDR034W-B	Q6Q5X2	51 aa		13.25	□□□□□ -0.29
SPP1	YPL138C	RXT2	P38255	430 aa		13.24	□□□□□ -0.29
SPP1	YPL138C	CCT3	P39077	534 aa	Known RBP	13.24	□□□□□ -0.29
SPP1	YPL138C	VPS72	Q03388	795 aa		13.24	□□□□□ -0.29
SPP1	YPL138C	HEM1	P09950	548 aa	Predicted RBP	13.23	□□□□□ -0.29
SPP1	YPL138C	SEC20	P28791	383 aa		13.23	□□□□□ -0.29
SPP1	YPL138C	GPT2	P36148	743 aa		13.23	□□□□□ -0.29
SPP1	YPL138C	UBP15	P50101	1230 aa		13.23	□□□□□ -0.29
SPP1	YPL138C	GIS4	Q04233	774 aa		13.23	□□□□□ -0.29
SPP1	YPL138C	ATG11	Q12527	1178 aa		13.23	□□□□□ -0.29
SPP1	YPL138C	MATALPHA2	P0CY08	210 aa		13.22	□□□□□ -0.29
SPP1	YPL138C	HMLALPHA2	P0CY09	210 aa		13.22	□□□□□ -0.29
SPP1	YPL138C	VPS1	P21576	704 aa	Known RBP	13.22	□□□□□ -0.29
SPP1	YPL138C	POT1	P27796	417 aa	Known RBP RIP-Chip data	13.22	□□□□□ -0.29	not detected
SPP1	YPL138C	YGL138C	P53122	345 aa		13.22	□□□□□ -0.29
SPP1	YPL138C	EAR1	Q03212	550 aa		13.22	□□□□□ -0.29
SPP1	YPL138C	CAD1	P24813	409 aa	Known RBP	13.21	□□□□□ -0.29
SPP1	YPL138C	TVP23	P38962	199 aa		13.21	□□□□□ -0.29
SPP1	YPL138C	SAD1	P43589	448 aa		13.21	□□□□□ -0.29
SPP1	YPL138C	YGR273C	P53329	174 aa		13.21	□□□□□ -0.29
SPP1	YPL138C	MSC2	Q03455	724 aa		13.21	□□□□□ -0.29
SPP1	YPL138C	TSR3	Q12094	313 aa	Known RBP	13.21	□□□□□ -0.29
SPP1	YPL138C	AHC1	Q12433	566 aa		13.21	□□□□□ -0.29
SPP1	YPL138C	UBR2	Q07963	1872 aa		13.21	□□□□□ -0.3
SPP1	YPL138C	HCA4	P20448	770 aa	Known RBP	13.2	□□□□□ -0.3
SPP1	YPL138C	MAK11	P20484	414 aa	Known RBP	13.2	□□□□□ -0.3
SPP1	YPL138C	ESS1	P22696	170 aa		13.2	□□□□□ -0.3
SPP1	YPL138C	PWP2	P25635	923 aa	Known RBP	13.2	□□□□□ -0.3
SPP1	YPL138C	BMH2	P34730	273 aa	Known RBP	13.2	□□□□□ -0.3
SPP1	YPL138C	KRI1	P42846	591 aa	Known RBP	13.2	□□□□□ -0.3
SPP1	YPL138C	YNL115C	P53925	644 aa		13.2	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms