RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	UGA4	P32837	571 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	TOD6	P34219	525 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	GPT2	P36148	743 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	SHU2	P38957	223 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	SLS1	P42900	643 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	ULP1	Q02724	621 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	DAL4	Q04895	635 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	OXR1	Q08952	273 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	ALG6	Q12001	544 aa	Known RBP	2.63	□□□□□ -1.99
RLM1	YPL089C	YGR045C	P53229	120 aa		2.63	□□□□□ -1.99
RLM1	YPL089C	CLU1	Q03690	1277 aa	Known RBP	2.63	□□□□□ -1.99
RLM1	YPL089C	MSH3	P25336	1018 aa		2.62	□□□□□ -1.99
RLM1	YPL089C	CTS1	P29029	562 aa		2.62	□□□□□ -1.99
RLM1	YPL089C	RPT1	P33299	467 aa	Known RBP	2.62	□□□□□ -1.99
RLM1	YPL089C	NEM1	P38757	446 aa		2.62	□□□□□ -1.99
RLM1	YPL089C	SNU71	P53207	620 aa	Known RBP	2.62	□□□□□ -1.99
RLM1	YPL089C	YPL109C	Q02981	657 aa		2.62	□□□□□ -1.99
RLM1	YPL089C	ADI1	Q03677	179 aa		2.62	□□□□□ -1.99
RLM1	YPL089C	FAA3	P39002	694 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	MSH4	P40965	878 aa	Predicted RBP	2.61	□□□□□ -1.99
RLM1	YPL089C	NOP7	P53261	605 aa	Known RBP	2.61	□□□□□ -1.99
RLM1	YPL089C	ORC3	P54790	616 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	VMA4	P22203	233 aa	Known RBP	2.61	□□□□□ -1.99
RLM1	YPL089C	RDH54	P38086	958 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	PEX28	P38848	579 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	POL32	P47110	350 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	ALT1	P52893	592 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	ELA1	P53861	379 aa	Predicted RBP	2.61	□□□□□ -1.99
RLM1	YPL089C	MRPL22	P53881	309 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	PEX13	P80667	386 aa		2.61	□□□□□ -1.99
RLM1	YPL089C	UTP5	Q04177	643 aa	Known RBP	2.61	□□□□□ -1.99
RLM1	YPL089C	RRP15	Q06511	250 aa	Predicted RBP	2.61	□□□□□ -1.99
RLM1	YPL089C	YLR358C	O13565	187 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	SOD2	P00447	233 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	RPS4A	P0CX35	261 aa	Known RBP	2.6	□□□□□ -1.99
RLM1	YPL089C	RPS4B	P0CX36	261 aa	Known RBP	2.6	□□□□□ -1.99
RLM1	YPL089C	HEM13	P11353	328 aa	Known RBP	2.6	□□□□□ -1.99
RLM1	YPL089C	ATE1	P16639	503 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	PIC2	P40035	300 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	MTR4	P47047	1073 aa	Known RBP	2.6	□□□□□ -1.99
RLM1	YPL089C	RSM26	P47141	266 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	YGL140C	P53120	1219 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	YGR122W	P53272	402 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	AVO1	Q08236	1176 aa		2.6	□□□□□ -1.99
RLM1	YPL089C	SMY2	P32909	740 aa	Known RBP	2.59	□□□□□ -1.99
RLM1	YPL089C	SQT1	P35184	431 aa		2.59	□□□□□ -1.99
RLM1	YPL089C	NNK1	P36003	928 aa		2.59	□□□□□ -1.99
RLM1	YPL089C	MGE1	P38523	228 aa		2.59	□□□□□ -1.99
RLM1	YPL089C	YJR107W	P47145	328 aa		2.59	□□□□□ -1.99
RLM1	YPL089C	EAR1	Q03212	550 aa		2.59	□□□□□ -1.99
RLM1	YPL089C	SEC23	P15303	768 aa	Known RBP	2.59	□□□□□ -2
RLM1	YPL089C	PAM1	P37304	830 aa	Known RBP	2.59	□□□□□ -2
RLM1	YPL089C	YAR028W	P39548	234 aa		2.59	□□□□□ -2
RLM1	YPL089C	XKS1	P42826	600 aa		2.59	□□□□□ -2
RLM1	YPL089C	RAD2	P07276	1031 aa		2.58	□□□□□ -2
RLM1	YPL089C	CYC8	P14922	966 aa		2.58	□□□□□ -2
RLM1	YPL089C	PRE9	P23638	258 aa	Known RBP	2.58	□□□□□ -2
RLM1	YPL089C	MET10	P39692	1035 aa		2.58	□□□□□ -2
RLM1	YPL089C	OYE3	P41816	400 aa	Predicted RBP	2.58	□□□□□ -2
RLM1	YPL089C	MRPS18	P42847	217 aa		2.58	□□□□□ -2
RLM1	YPL089C	MCD1	Q12158	566 aa		2.58	□□□□□ -2
RLM1	YPL089C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	RIP-Chip
RLM1	YPL089C	RET1	P22276	1149 aa	Known RBP	2.58	□□□□□ -2
RLM1	YPL089C	MCM2	P29469	868 aa		2.58	□□□□□ -2
RLM1	YPL089C	ASF1	P32447	279 aa		2.58	□□□□□ -2
RLM1	YPL089C	ADD66	P36040	267 aa		2.58	□□□□□ -2
RLM1	YPL089C	RPS26A	P39938	119 aa	Known RBP	2.58	□□□□□ -2
RLM1	YPL089C	RPS26B	P39939	119 aa	Known RBP	2.58	□□□□□ -2
RLM1	YPL089C	RKM2	Q03942	479 aa		2.58	□□□□□ -2
RLM1	YPL089C	LAP2	Q10740	671 aa		2.58	□□□□□ -2
RLM1	YPL089C	PUS9	Q12069	462 aa		2.58	□□□□□ -2
RLM1	YPL089C	YVC1	Q12324	675 aa		2.58	□□□□□ -2
RLM1	YPL089C	TAF13	P11747	167 aa		2.57	□□□□□ -2
RLM1	YPL089C	PEX7	P39108	375 aa		2.57	□□□□□ -2
RLM1	YPL089C	YLR257W	Q06146	321 aa	Known RBP	2.57	□□□□□ -2
RLM1	YPL089C	EST2	Q06163	884 aa		2.57	□□□□□ -2
RLM1	YPL089C	PUS7	Q08647	676 aa	Known RBP	2.57	□□□□□ -2
RLM1	YPL089C	TRE1	Q08919	783 aa		2.57	□□□□□ -2
RLM1	YPL089C	SEC8	P32855	1065 aa		2.56	□□□□□ -2
RLM1	YPL089C	HSE1	P38753	452 aa		2.56	□□□□□ -2
RLM1	YPL089C	FYV10	P40492	516 aa		2.56	□□□□□ -2
RLM1	YPL089C	SPR28	Q04921	423 aa		2.56	□□□□□ -2
RLM1	YPL089C	RSA3	Q05942	220 aa	Known RBP	2.56	□□□□□ -2
RLM1	YPL089C	AFG2	P32794	780 aa		2.56	□□□□□ -2
RLM1	YPL089C	QNS1	P38795	714 aa	Known RBP	2.56	□□□□□ -2
RLM1	YPL089C	YNR063W	P53749	607 aa		2.56	□□□□□ -2
RLM1	YPL089C	SSY1	Q03770	852 aa		2.56	□□□□□ -2
RLM1	YPL089C	TPP1	Q03796	238 aa		2.56	□□□□□ -2
RLM1	YPL089C	YPL277C	Q08989	487 aa		2.56	□□□□□ -2
RLM1	YPL089C	AIM44	Q99299	758 aa		2.56	□□□□□ -2
RLM1	YPL089C	ATG14	P38270	344 aa		2.55	□□□□□ -2
RLM1	YPL089C	VPS53	P47061	822 aa		2.55	□□□□□ -2
RLM1	YPL089C	GNP1	P48813	663 aa		2.55	□□□□□ -2
RLM1	YPL089C	ORC1	P54784	914 aa	Predicted RBP	2.55	□□□□□ -2
RLM1	YPL089C	GCR1	P07261	785 aa		2.54	□□□□□ -2
RLM1	YPL089C	SAM35	P14693	329 aa		2.54	□□□□□ -2
RLM1	YPL089C	TRM2	P33753	639 aa		2.54	□□□□□ -2
RLM1	YPL089C	NMD3	P38861	518 aa	Known RBP	2.54	□□□□□ -2
RLM1	YPL089C	HXT13	P39924	564 aa		2.54	□□□□□ -2
RLM1	YPL089C	ENT3	P47160	408 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms