RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W THI72Q08579 599 aa3.45□□□□□ -1.86
BRO1YPL084W SRP40P32583 406 aaPredicted RBP3.45□□□□□ -1.86
BRO1YPL084W LYP1P32487 611 aa3.44□□□□□ -1.86
BRO1YPL084W ENT3P47160 408 aa3.44□□□□□ -1.86
BRO1YPL084W SPO20Q04359 397 aa3.44□□□□□ -1.86
BRO1YPL084W YLR225CQ05948 407 aaKnown RBP3.44□□□□□ -1.86
BRO1YPL084W SYP1P25623 870 aaKnown RBP3.44□□□□□ -1.86
BRO1YPL084W MOT2P34909 587 aaKnown RBP3.44□□□□□ -1.86
BRO1YPL084W YAR028WP39548 234 aa3.44□□□□□ -1.86
BRO1YPL084W SPF1P39986 1215 aaKnown RBP3.44□□□□□ -1.86
BRO1YPL084W IOC3P43596 787 aa3.44□□□□□ -1.86
BRO1YPL084W YJL049WP47048 450 aa3.44□□□□□ -1.86
BRO1YPL084W YGR045CP53229 120 aa3.44□□□□□ -1.86
BRO1YPL084W ELA1P53861 379 aaPredicted RBP3.44□□□□□ -1.86
BRO1YPL084W TIF35Q04067 274 aaKnown RBP3.44□□□□□ -1.86
BRO1YPL084W ESC2Q06340 456 aa3.44□□□□□ -1.86
BRO1YPL084W GAS5Q08193 484 aa3.44□□□□□ -1.86
BRO1YPL084W LAP2Q10740 671 aa3.44□□□□□ -1.86
BRO1YPL084W YOR223WQ12015 292 aa3.44□□□□□ -1.86
BRO1YPL084W ABD1P32783 436 aaPredicted RBP3.43□□□□□ -1.86
BRO1YPL084W RKM2Q03942 479 aa3.43□□□□□ -1.86
BRO1YPL084W DOT1Q04089 582 aaKnown RBP3.43□□□□□ -1.86
BRO1YPL084W TY1A-NL1Q12391 440 aaKnown RBP3.43□□□□□ -1.86
BRO1YPL084W AFG2P32794 780 aa3.43□□□□□ -1.86
BRO1YPL084W MDJ1P35191 511 aa3.43□□□□□ -1.86
BRO1YPL084W SEA4P38164 1038 aa3.43□□□□□ -1.86
BRO1YPL084W TAT2P38967 592 aa3.43□□□□□ -1.86
BRO1YPL084W YPL062WQ02781 134 aa3.43□□□□□ -1.86
BRO1YPL084W TDA6Q06466 467 aa3.43□□□□□ -1.86
BRO1YPL084W CDC53Q12018 815 aaKnown RBP3.43□□□□□ -1.86
BRO1YPL084W INO1P11986 533 aa3.42□□□□□ -1.86
BRO1YPL084W YKL091CP33324 310 aaKnown RBP3.42□□□□□ -1.86
BRO1YPL084W ALG3P38179 458 aa3.42□□□□□ -1.86
BRO1YPL084W BUD9P53226 547 aa3.42□□□□□ -1.86
BRO1YPL084W NCE103P53615 221 aa3.42□□□□□ -1.86
BRO1YPL084W NSE3Q05541 303 aa3.42□□□□□ -1.86
BRO1YPL084W PTC5Q12511 572 aa3.42□□□□□ -1.86
BRO1YPL084W RAD4P14736 754 aa3.42□□□□□ -1.86
BRO1YPL084W MCM7P38132 845 aa3.42□□□□□ -1.86
BRO1YPL084W YFL066CP43538 392 aa3.42□□□□□ -1.86
BRO1YPL084W CNN1P43618 361 aa3.42□□□□□ -1.86
BRO1YPL084W AOS1Q06624 347 aa3.42□□□□□ -1.86
BRO1YPL084W DBP5P20449 482 aaKnown RBP3.41□□□□□ -1.86
BRO1YPL084W PUF4P25339 888 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
BRO1YPL084W AGP1P25376 633 aa3.41□□□□□ -1.86
BRO1YPL084W GPT2P36148 743 aa3.41□□□□□ -1.86
BRO1YPL084W HSE1P38753 452 aa3.41□□□□□ -1.86
BRO1YPL084W KRI1P42846 591 aaKnown RBP3.41□□□□□ -1.86
BRO1YPL084W HUL5P53119 910 aa3.41□□□□□ -1.86
BRO1YPL084W NSG2P53898 299 aa3.41□□□□□ -1.86
BRO1YPL084W NAN1Q02931 896 aaKnown RBP3.41□□□□□ -1.86
BRO1YPL084W STI1P15705 589 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
BRO1YPL084W RET1P22276 1149 aaKnown RBP3.41□□□□□ -1.86
BRO1YPL084W NFS1P25374 497 aa3.41□□□□□ -1.86
BRO1YPL084W MLS1P30952 554 aa3.41□□□□□ -1.86
BRO1YPL084W STE5P32917 917 aa3.41□□□□□ -1.86
BRO1YPL084W VBA5P36172 582 aa3.41□□□□□ -1.86
BRO1YPL084W YBR184WP38299 523 aa3.41□□□□□ -1.86
BRO1YPL084W YGL176CP46945 554 aa3.41□□□□□ -1.86
BRO1YPL084W PRY1P47032 299 aa3.41□□□□□ -1.86
BRO1YPL084W TIM54P47045 478 aa3.41□□□□□ -1.86
BRO1YPL084W BDF2Q07442 638 aa3.41□□□□□ -1.86
BRO1YPL084W SBA1P28707 216 aaKnown RBP3.4□□□□□ -1.86
BRO1YPL084W SFA1P32771 386 aa3.4□□□□□ -1.86
BRO1YPL084W MCX1P38323 520 aaPredicted RBP3.4□□□□□ -1.86
BRO1YPL084W QNS1P38795 714 aaKnown RBP3.4□□□□□ -1.86
BRO1YPL084W NMD3P38861 518 aaKnown RBP3.4□□□□□ -1.86
BRO1YPL084W VPS53P47061 822 aa3.4□□□□□ -1.86
BRO1YPL084W FPR4Q06205 392 aaPredicted RBP3.4□□□□□ -1.86
BRO1YPL084W YOR131CQ12486 218 aa3.4□□□□□ -1.86
BRO1YPL084W YKL107WP34251 309 aa3.4□□□□□ -1.87
BRO1YPL084W MPH1P40562 993 aa3.4□□□□□ -1.87
BRO1YPL084W MSH4P40965 878 aaPredicted RBP3.4□□□□□ -1.87
BRO1YPL084W SHE9Q04172 456 aa3.4□□□□□ -1.87
BRO1YPL084W RSA3Q05942 220 aaKnown RBP3.4□□□□□ -1.87
BRO1YPL084W YPL066WQ12194 479 aa3.4□□□□□ -1.87
BRO1YPL084W RKM4Q12504 494 aa3.4□□□□□ -1.87
BRO1YPL084W AI3P03877 415 aa3.39□□□□□ -1.87
BRO1YPL084W RSC6P25632 483 aa3.39□□□□□ -1.87
BRO1YPL084W NNK1P36003 928 aa3.39□□□□□ -1.87
BRO1YPL084W YLR257WQ06146 321 aaKnown RBP3.39□□□□□ -1.87
BRO1YPL084W SPO75Q07798 868 aa3.39□□□□□ -1.87
BRO1YPL084W SMY2P32909 740 aaKnown RBP3.39□□□□□ -1.87
BRO1YPL084W PIN4P34217 668 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
BRO1YPL084W RGD1P38339 666 aa3.39□□□□□ -1.87
BRO1YPL084W IRR1P40541 1150 aa3.39□□□□□ -1.87
BRO1YPL084W YMR187CQ03236 431 aa3.39□□□□□ -1.87
BRO1YPL084W KIP1P28742 1111 aa3.38□□□□□ -1.87
BRO1YPL084W MRP8P35719 219 aa3.38□□□□□ -1.87
BRO1YPL084W MBP1P39678 833 aa3.38□□□□□ -1.87
BRO1YPL084W SLN1P39928 1220 aaPredicted RBP3.38□□□□□ -1.87
BRO1YPL084W HNT2P49775 206 aa3.38□□□□□ -1.87
BRO1YPL084W YGR125WP53273 1036 aa3.38□□□□□ -1.87
BRO1YPL084W RPN4Q03465 531 aa3.38□□□□□ -1.87
BRO1YPL084W OSH2Q12451 1283 aa3.38□□□□□ -1.87
BRO1YPL084W GPB2P39717 880 aa3.38□□□□□ -1.87
BRO1YPL084W GIC2Q06648 383 aa3.38□□□□□ -1.87
BRO1YPL084W CIT2P08679 460 aa3.37□□□□□ -1.87
BRO1YPL084W RPS4AP0CX35 261 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W RPS4BP0CX36 261 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms