RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C ATH1P48016 1211 aa6.47□□□□□ -1.37
LDB19YOR322C HGH1P48362 394 aaKnown RBP6.47□□□□□ -1.37
LDB19YOR322C YNR021WP53723 404 aaKnown RBP6.47□□□□□ -1.37
LDB19YOR322C FPK1P53739 893 aa6.47□□□□□ -1.37
LDB19YOR322C MDM36Q06820 579 aa6.47□□□□□ -1.37
LDB19YOR322C BRX1Q08235 291 aaKnown RBP6.47□□□□□ -1.37
LDB19YOR322C SLX1P38324 304 aa6.47□□□□□ -1.37
LDB19YOR322C OSH3P38713 996 aaKnown RBP6.47□□□□□ -1.37
LDB19YOR322C PET100P38958 111 aa6.47□□□□□ -1.37
LDB19YOR322C YJL070CP40361 888 aa6.47□□□□□ -1.37
LDB19YOR322C RTF1P53064 558 aa6.47□□□□□ -1.37
LDB19YOR322C SPO1P53541 631 aa6.47□□□□□ -1.37
LDB19YOR322C ATG16Q03818 150 aa6.47□□□□□ -1.37
LDB19YOR322C KRE28Q04431 385 aa6.47□□□□□ -1.37
LDB19YOR322C PDR15Q04182 1529 aaKnown RBP6.46□□□□□ -1.38
LDB19YOR322C GLN1P32288 370 aaKnown RBP6.46□□□□□ -1.38
LDB19YOR322C TFB1P32776 642 aa6.46□□□□□ -1.38
LDB19YOR322C NUP120P35729 1037 aa6.46□□□□□ -1.38
LDB19YOR322C YFL066CP43538 392 aa6.46□□□□□ -1.38
LDB19YOR322C SDA1P53313 767 aaKnown RBP6.46□□□□□ -1.38
LDB19YOR322C VPS60Q03390 229 aa6.46□□□□□ -1.38
LDB19YOR322C POB3Q04636 552 aaKnown RBP6.46□□□□□ -1.38
LDB19YOR322C DON1Q05610 365 aa6.46□□□□□ -1.38
LDB19YOR322C TAF3Q12297 353 aa6.46□□□□□ -1.38
LDB19YOR322C TRM1P15565 570 aaKnown RBP6.45□□□□□ -1.38
LDB19YOR322C DPB3P27344 201 aa6.45□□□□□ -1.38
LDB19YOR322C PET112P33893 541 aa6.45□□□□□ -1.38
LDB19YOR322C SAP1P39955 897 aaKnown RBP6.45□□□□□ -1.38
LDB19YOR322C ALA1P40825 983 aaKnown RBP6.45□□□□□ -1.38
LDB19YOR322C DIP5P53388 608 aa6.45□□□□□ -1.38
LDB19YOR322C HOT1Q03213 719 aa6.45□□□□□ -1.38
LDB19YOR322C UBX2Q04228 584 aa6.45□□□□□ -1.38
LDB19YOR322C STH1P32597 1359 aa6.45□□□□□ -1.38
LDB19YOR322C FUS1P11710 512 aa6.45□□□□□ -1.38
LDB19YOR322C STE6P12866 1290 aa6.45□□□□□ -1.38
LDB19YOR322C REB1P21538 810 aa6.45□□□□□ -1.38
LDB19YOR322C REC107P21651 314 aa6.45□□□□□ -1.38
LDB19YOR322C TPD3P31383 635 aa6.45□□□□□ -1.38
LDB19YOR322C CSE1P33307 960 aa6.45□□□□□ -1.38
LDB19YOR322C SNZ3P43545 298 aa6.45□□□□□ -1.38
LDB19YOR322C AGX1P43567 385 aa6.45□□□□□ -1.38
LDB19YOR322C YJL055WP47044 245 aa6.45□□□□□ -1.38
LDB19YOR322C FOL2P51601 243 aaKnown RBP6.45□□□□□ -1.38
LDB19YOR322C YGR067CP53243 804 aa6.45□□□□□ -1.38
LDB19YOR322C SNZ2P53824 298 aa6.45□□□□□ -1.38
LDB19YOR322C GCR2Q01722 534 aa6.45□□□□□ -1.38
LDB19YOR322C DNL4Q08387 944 aaPredicted RBP6.45□□□□□ -1.38
LDB19YOR322C TEF1P02994 458 aaKnown RBP6.44□□□□□ -1.38
LDB19YOR322C VPS35P34110 944 aa6.44□□□□□ -1.38
LDB19YOR322C MIC60P36112 540 aa6.44□□□□□ -1.38
LDB19YOR322C CCL1P37366 393 aa6.44□□□□□ -1.38
LDB19YOR322C SIP3P38717 1229 aa6.44□□□□□ -1.38
LDB19YOR322C ESL1P40456 1118 aa6.44□□□□□ -1.38
LDB19YOR322C YIR014WP40570 242 aa6.44□□□□□ -1.38
LDB19YOR322C YMR102CQ03177 834 aa6.44□□□□□ -1.38
LDB19YOR322C OSH2Q12451 1283 aa6.44□□□□□ -1.38
LDB19YOR322C ATP4P05626 244 aa6.44□□□□□ -1.38
LDB19YOR322C HSP104P31539 908 aaKnown RBP6.44□□□□□ -1.38
LDB19YOR322C SLA2P33338 968 aa6.44□□□□□ -1.38
LDB19YOR322C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
LDB19YOR322C VTC2P43585 828 aa6.44□□□□□ -1.38
LDB19YOR322C SAE2P46946 345 aa6.44□□□□□ -1.38
LDB19YOR322C YGL140CP53120 1219 aa6.44□□□□□ -1.38
LDB19YOR322C FOL1P53848 824 aa6.44□□□□□ -1.38
LDB19YOR322C AAD16Q02895 342 aa6.44□□□□□ -1.38
LDB19YOR322C YDR090CQ03193 310 aa6.44□□□□□ -1.38
LDB19YOR322C ECM11Q04110 302 aa6.44□□□□□ -1.38
LDB19YOR322C LCD1Q04377 747 aa6.44□□□□□ -1.38
LDB19YOR322C YRF1-4O13559 1382 aa6.43□□□□□ -1.38
LDB19YOR322C YML133CQ03099 1374 aa6.43□□□□□ -1.38
LDB19YOR322C YLL067CQ07888 1374 aa6.43□□□□□ -1.38
LDB19YOR322C YLL066CQ99208 1374 aa6.43□□□□□ -1.38
LDB19YOR322C GLK1P17709 500 aaKnown RBP6.43□□□□□ -1.38
LDB19YOR322C GUT1P32190 709 aa6.43□□□□□ -1.38
LDB19YOR322C ECM4P36156 370 aa6.43□□□□□ -1.38
LDB19YOR322C KAP123P40069 1113 aaKnown RBP6.43□□□□□ -1.38
LDB19YOR322C CAF130P53280 1122 aaPredicted RBP6.43□□□□□ -1.38
LDB19YOR322C ARP5P53946 755 aa6.43□□□□□ -1.38
LDB19YOR322C ADE13Q05911 482 aaKnown RBP6.43□□□□□ -1.38
LDB19YOR322C RKM1Q08961 583 aaPredicted RBP6.43□□□□□ -1.38
LDB19YOR322C RAD27P26793 382 aa6.43□□□□□ -1.38
LDB19YOR322C BMH1P29311 267 aaKnown RBP6.43□□□□□ -1.38
LDB19YOR322C SET3P36124 751 aa6.43□□□□□ -1.38
LDB19YOR322C CIN4P39110 191 aa6.43□□□□□ -1.38
LDB19YOR322C NDE1P40215 560 aa6.43□□□□□ -1.38
LDB19YOR322C RET2P43621 546 aa6.43□□□□□ -1.38
LDB19YOR322C UBP15P50101 1230 aa6.43□□□□□ -1.38
LDB19YOR322C DIB1Q06819 143 aaPredicted RBP6.43□□□□□ -1.38
LDB19YOR322C YRM1Q12340 786 aa6.43□□□□□ -1.38
LDB19YOR322C SPS1P08458 490 aa6.42□□□□□ -1.38
LDB19YOR322C VAN1P23642 535 aa6.42□□□□□ -1.38
LDB19YOR322C NPP1P25353 742 aa6.42□□□□□ -1.38
LDB19YOR322C SRO9P25567 434 aaKnown RBP6.42□□□□□ -1.38
LDB19YOR322C DOM34P33309 386 aa6.42□□□□□ -1.38
LDB19YOR322C YKL100CP34248 587 aa6.42□□□□□ -1.38
LDB19YOR322C MRPL40P36534 297 aa6.42□□□□□ -1.38
LDB19YOR322C YSW1P38280 609 aa6.42□□□□□ -1.38
LDB19YOR322C MSR1P38714 643 aa6.42□□□□□ -1.38
LDB19YOR322C MTW1P39731 289 aa6.42□□□□□ -1.38
LDB19YOR322C MNT3P40549 630 aa6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 165.8 ms