RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C XKS1P42826 600 aa6.73□□□□□ -1.33
RPN8YOR261C SPO74P45819 413 aa6.73□□□□□ -1.33
RPN8YOR261C GIC2Q06648 383 aa6.73□□□□□ -1.33
RPN8YOR261C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
RPN8YOR261C GCR1P07261 785 aa6.72□□□□□ -1.33
RPN8YOR261C TAF13P11747 167 aa6.72□□□□□ -1.33
RPN8YOR261C AVO1Q08236 1176 aa6.72□□□□□ -1.33
RPN8YOR261C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34 RIP-Chip
RPN8YOR261C ADD66P36040 267 aa6.71□□□□□ -1.34
RPN8YOR261C GNP1P48813 663 aa6.71□□□□□ -1.34
RPN8YOR261C ELA1P53861 379 aaPredicted RBP6.71□□□□□ -1.34
RPN8YOR261C HDA2Q06629 674 aa6.71□□□□□ -1.34
RPN8YOR261C RNQ1P25367 405 aa6.7□□□□□ -1.34
RPN8YOR261C PAM1P37304 830 aaKnown RBP6.7□□□□□ -1.34
RPN8YOR261C YAR028WP39548 234 aa6.7□□□□□ -1.34
RPN8YOR261C MSH4P40965 878 aaPredicted RBP6.7□□□□□ -1.34
RPN8YOR261C SVF1Q05515 481 aa6.7□□□□□ -1.34
RPN8YOR261C EST2Q06163 884 aa6.7□□□□□ -1.34
RPN8YOR261C CYC7P00045 113 aa6.69□□□□□ -1.34
RPN8YOR261C SEA4P38164 1038 aa6.69□□□□□ -1.34
RPN8YOR261C HXT13P39924 564 aa6.69□□□□□ -1.34
RPN8YOR261C HXT17P53631 564 aa6.69□□□□□ -1.34
RPN8YOR261C HXT15P54854 567 aa6.69□□□□□ -1.34
RPN8YOR261C RKM2Q03942 479 aa6.69□□□□□ -1.34
RPN8YOR261C SIW14P53965 281 aa6.68□□□□□ -1.34
RPN8YOR261C RPS4AP0CX35 261 aaKnown RBP6.67□□□□□ -1.34
RPN8YOR261C RPS4BP0CX36 261 aaKnown RBP6.67□□□□□ -1.34
RPN8YOR261C SMY2P32909 740 aaKnown RBP6.67□□□□□ -1.34
RPN8YOR261C MNR2P35724 969 aa6.67□□□□□ -1.34
RPN8YOR261C NNK1P36003 928 aa6.67□□□□□ -1.34
RPN8YOR261C UBP5P39944 805 aa6.67□□□□□ -1.34
RPN8YOR261C ALT1P52893 592 aa6.67□□□□□ -1.34
RPN8YOR261C YNR063WP53749 607 aa6.67□□□□□ -1.34
RPN8YOR261C ROD1Q02805 837 aa6.67□□□□□ -1.34
RPN8YOR261C MRL1Q06815 381 aa6.67□□□□□ -1.34
RPN8YOR261C NFS1P25374 497 aa6.66□□□□□ -1.34
RPN8YOR261C AFG2P32794 780 aa6.66□□□□□ -1.34
RPN8YOR261C DUT1P33317 147 aa6.66□□□□□ -1.34
RPN8YOR261C PET112P33893 541 aa6.66□□□□□ -1.34
RPN8YOR261C ENT3P47160 408 aa6.66□□□□□ -1.34
RPN8YOR261C RTT10Q08924 1013 aa6.66□□□□□ -1.34
RPN8YOR261C LAP2Q10740 671 aa6.66□□□□□ -1.34
RPN8YOR261C RET1P22276 1149 aaKnown RBP6.65□□□□□ -1.34
RPN8YOR261C EAR1Q03212 550 aa6.65□□□□□ -1.34
RPN8YOR261C CDC34P14682 295 aa6.64□□□□□ -1.35
RPN8YOR261C MSB1P21339 1137 aaKnown RBP6.64□□□□□ -1.35
RPN8YOR261C ATG14P38270 344 aa6.64□□□□□ -1.35
RPN8YOR261C MMM1P41800 426 aa6.64□□□□□ -1.35
RPN8YOR261C RSA3Q05942 220 aaKnown RBP6.64□□□□□ -1.35
RPN8YOR261C DED1P06634 604 aaKnown RBP6.63□□□□□ -1.35
RPN8YOR261C MKK2P32491 506 aa6.63□□□□□ -1.35
RPN8YOR261C WHI3P34761 661 aaKnown RBP6.63□□□□□ -1.35
RPN8YOR261C HSE1P38753 452 aa6.63□□□□□ -1.35
RPN8YOR261C QNS1P38795 714 aaKnown RBP6.63□□□□□ -1.35
RPN8YOR261C YLR257WQ06146 321 aaKnown RBP6.63□□□□□ -1.35
RPN8YOR261C RER2P35196 286 aa6.62□□□□□ -1.35
RPN8YOR261C CIT3P43635 486 aa6.62□□□□□ -1.35
RPN8YOR261C RAT1Q02792 1006 aaKnown RBP6.62□□□□□ -1.35
RPN8YOR261C JIP5Q06214 492 aaPredicted RBP6.62□□□□□ -1.35
RPN8YOR261C TMA46Q12000 345 aaKnown RBP6.62□□□□□ -1.35
RPN8YOR261C NAP1P25293 417 aaKnown RBP6.61□□□□□ -1.35
RPN8YOR261C RAD27P26793 382 aa6.61□□□□□ -1.35
RPN8YOR261C MET10P39692 1035 aa6.61□□□□□ -1.35
RPN8YOR261C VPS53P47061 822 aa6.61□□□□□ -1.35
RPN8YOR261C VPS16Q03308 798 aa6.61□□□□□ -1.35
RPN8YOR261C PIN2Q12057 282 aa6.61□□□□□ -1.35
RPN8YOR261C SEG2P34250 1132 aa6.6□□□□□ -1.35
RPN8YOR261C LRG1P35688 1017 aa6.6□□□□□ -1.35
RPN8YOR261C RCM1P53972 490 aa6.6□□□□□ -1.35
RPN8YOR261C YOR059CQ08448 450 aaKnown RBP6.6□□□□□ -1.35
RPN8YOR261C PUS7Q08647 676 aaKnown RBP6.6□□□□□ -1.35
RPN8YOR261C YVC1Q12324 675 aa6.6□□□□□ -1.35
RPN8YOR261C PTC5Q12511 572 aa6.6□□□□□ -1.35
RPN8YOR261C ALG3P38179 458 aa6.59□□□□□ -1.35
RPN8YOR261C NMD3P38861 518 aaKnown RBP6.59□□□□□ -1.35
RPN8YOR261C YGR053CP53234 283 aa6.59□□□□□ -1.35
RPN8YOR261C SDH1Q00711 640 aa6.59□□□□□ -1.35
RPN8YOR261C EEB1Q02891 456 aa6.59□□□□□ -1.35
RPN8YOR261C TPP1Q03796 238 aa6.59□□□□□ -1.35
RPN8YOR261C CLN2P20438 545 aa6.58□□□□□ -1.36
RPN8YOR261C SYP1P25623 870 aaKnown RBP6.58□□□□□ -1.36
RPN8YOR261C MAD1P40957 749 aa6.58□□□□□ -1.36
RPN8YOR261C KIP1P28742 1111 aa6.57□□□□□ -1.36
RPN8YOR261C OYE3P41816 400 aaPredicted RBP6.57□□□□□ -1.36
RPN8YOR261C GCD1P09032 578 aaPredicted RBP6.56□□□□□ -1.36
RPN8YOR261C DBP5P20449 482 aaKnown RBP6.56□□□□□ -1.36
RPN8YOR261C PEX7P39108 375 aa6.56□□□□□ -1.36
RPN8YOR261C CNN1P43618 361 aa6.56□□□□□ -1.36
RPN8YOR261C FAA4P47912 694 aaKnown RBP6.56□□□□□ -1.36
RPN8YOR261C NOP7P53261 605 aaKnown RBP6.56□□□□□ -1.36
RPN8YOR261C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
RPN8YOR261C HRK1Q08732 759 aaKnown RBP6.56□□□□□ -1.36
RPN8YOR261C RGD1P38339 666 aa6.55□□□□□ -1.36
RPN8YOR261C YJL045WP47052 634 aa6.55□□□□□ -1.36
RPN8YOR261C GDE1Q02979 1223 aa6.55□□□□□ -1.36
RPN8YOR261C TIF35Q04067 274 aaKnown RBP6.55□□□□□ -1.36
RPN8YOR261C TRP2P00899 507 aaKnown RBP6.54□□□□□ -1.36
RPN8YOR261C SAM35P14693 329 aa6.54□□□□□ -1.36
RPN8YOR261C LYP1P32487 611 aa6.54□□□□□ -1.36
RPN8YOR261C MPH1P40562 993 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms