RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C NNK1P36003 928 aa4.44□□□□□ -1.7
HRD1YOL013C MSH4P40965 878 aaPredicted RBP4.44□□□□□ -1.7
HRD1YOL013C SLS1P42900 643 aa4.44□□□□□ -1.7
HRD1YOL013C IOC3P43596 787 aa4.44□□□□□ -1.7
HRD1YOL013C PEX13P80667 386 aa4.44□□□□□ -1.7
HRD1YOL013C SVF1Q05515 481 aa4.44□□□□□ -1.7
HRD1YOL013C BRE4Q07660 1125 aa4.44□□□□□ -1.7
HRD1YOL013C CIT2P08679 460 aa4.43□□□□□ -1.7
HRD1YOL013C VMA4P22203 233 aaKnown RBP4.43□□□□□ -1.7
HRD1YOL013C SMY2P32909 740 aaKnown RBP4.43□□□□□ -1.7
HRD1YOL013C FYV10P40492 516 aa4.43□□□□□ -1.7
HRD1YOL013C ALT1P52893 592 aa4.43□□□□□ -1.7
HRD1YOL013C ELA1P53861 379 aaPredicted RBP4.43□□□□□ -1.7
HRD1YOL013C NFS1P25374 497 aa4.42□□□□□ -1.7
HRD1YOL013C UGA4P32837 571 aa4.42□□□□□ -1.7
HRD1YOL013C PPG1P32838 368 aa4.42□□□□□ -1.7
HRD1YOL013C ATG14P38270 344 aa4.42□□□□□ -1.7
HRD1YOL013C YJR107WP47145 328 aa4.42□□□□□ -1.7
HRD1YOL013C CTH1P47976 325 aa4.42□□□□□ -1.7
HRD1YOL013C RCM1P53972 490 aa4.42□□□□□ -1.7
HRD1YOL013C ADI1Q03677 179 aa4.42□□□□□ -1.7
HRD1YOL013C GLT1Q12680 2145 aaKnown RBP4.42□□□□□ -1.7
HRD1YOL013C MGE1P38523 228 aa4.41□□□□□ -1.7
HRD1YOL013C NEM1P38757 446 aa4.41□□□□□ -1.7
HRD1YOL013C PEX28P38848 579 aa4.41□□□□□ -1.7
HRD1YOL013C ALD6P54115 500 aaKnown RBP4.41□□□□□ -1.7
HRD1YOL013C UTP5Q04177 643 aaKnown RBP4.41□□□□□ -1.7
HRD1YOL013C LAP2Q10740 671 aa4.41□□□□□ -1.7
HRD1YOL013C TSR4P25040 408 aa4.41□□□□□ -1.7
HRD1YOL013C HSE1P38753 452 aa4.41□□□□□ -1.7
HRD1YOL013C YAR028WP39548 234 aa4.41□□□□□ -1.7
HRD1YOL013C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
HRD1YOL013C YPL109CQ02981 657 aa4.41□□□□□ -1.7
HRD1YOL013C TOS4Q06266 489 aa4.41□□□□□ -1.7
HRD1YOL013C HXK1P04806 485 aaKnown RBP4.4□□□□□ -1.71
HRD1YOL013C SRP40P32583 406 aaPredicted RBP4.4□□□□□ -1.71
HRD1YOL013C TOM20P35180 183 aa4.4□□□□□ -1.71
HRD1YOL013C FAA3P39002 694 aa4.4□□□□□ -1.71
HRD1YOL013C ALG12P53730 551 aa4.4□□□□□ -1.71
HRD1YOL013C GCD1P09032 578 aaPredicted RBP4.39□□□□□ -1.71
HRD1YOL013C MCM2P29469 868 aa4.39□□□□□ -1.71
HRD1YOL013C YKL091CP33324 310 aaKnown RBP4.39□□□□□ -1.71
HRD1YOL013C XKS1P42826 600 aa4.39□□□□□ -1.71
HRD1YOL013C YGR122WP53272 402 aa4.39□□□□□ -1.71
HRD1YOL013C BUD21Q08492 214 aaPredicted RBP4.39□□□□□ -1.71
HRD1YOL013C MCD1Q12158 566 aa4.39□□□□□ -1.71
HRD1YOL013C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
HRD1YOL013C RET1P22276 1149 aaKnown RBP4.38□□□□□ -1.71
HRD1YOL013C OYE3P41816 400 aaPredicted RBP4.38□□□□□ -1.71
HRD1YOL013C MRPS18P42847 217 aa4.38□□□□□ -1.71
HRD1YOL013C YRB30P53107 440 aaPredicted RBP4.38□□□□□ -1.71
HRD1YOL013C YGL140CP53120 1219 aa4.38□□□□□ -1.71
HRD1YOL013C TPO2P53283 614 aa4.38□□□□□ -1.71
HRD1YOL013C SDH1Q00711 640 aa4.38□□□□□ -1.71
HRD1YOL013C SPR28Q04921 423 aa4.38□□□□□ -1.71
HRD1YOL013C YVC1Q12324 675 aa4.38□□□□□ -1.71
HRD1YOL013C RDH54P38086 958 aa4.38□□□□□ -1.71
HRD1YOL013C EAR1Q03212 550 aa4.38□□□□□ -1.71
HRD1YOL013C RKM2Q03942 479 aa4.38□□□□□ -1.71
HRD1YOL013C TRE1Q08919 783 aa4.38□□□□□ -1.71
HRD1YOL013C TAF13P11747 167 aa4.37□□□□□ -1.71
HRD1YOL013C SEC23P15303 768 aaKnown RBP4.37□□□□□ -1.71
HRD1YOL013C ADD66P36040 267 aa4.37□□□□□ -1.71
HRD1YOL013C YNR063WP53749 607 aa4.37□□□□□ -1.71
HRD1YOL013C SUB1P54000 292 aaKnown RBP4.37□□□□□ -1.71
HRD1YOL013C TPP1Q03796 238 aa4.37□□□□□ -1.71
HRD1YOL013C YLR257WQ06146 321 aaKnown RBP4.37□□□□□ -1.71
HRD1YOL013C PUS7Q08647 676 aaKnown RBP4.37□□□□□ -1.71
HRD1YOL013C HRK1Q08732 759 aaKnown RBP4.37□□□□□ -1.71
HRD1YOL013C PRE9P23638 258 aaKnown RBP4.36□□□□□ -1.71
HRD1YOL013C ADP1P25371 1049 aa4.36□□□□□ -1.71
HRD1YOL013C RRP14P36080 434 aaKnown RBP4.36□□□□□ -1.71
HRD1YOL013C VPS16Q03308 798 aa4.36□□□□□ -1.71
HRD1YOL013C RAD2P07276 1031 aa4.35□□□□□ -1.71
HRD1YOL013C PIC2P40035 300 aa4.35□□□□□ -1.71
HRD1YOL013C VPS53P47061 822 aa4.35□□□□□ -1.71
HRD1YOL013C AVT1P47082 602 aa4.35□□□□□ -1.71
HRD1YOL013C RSA3Q05942 220 aaKnown RBP4.35□□□□□ -1.71
HRD1YOL013C EST2Q06163 884 aa4.35□□□□□ -1.71
HRD1YOL013C CYC8P14922 966 aa4.35□□□□□ -1.71
HRD1YOL013C FPR3P38911 411 aaKnown RBP4.35□□□□□ -1.71
HRD1YOL013C PEX7P39108 375 aa4.35□□□□□ -1.71
HRD1YOL013C RPS26AP39938 119 aaKnown RBP4.35□□□□□ -1.71
HRD1YOL013C RPS26BP39939 119 aaKnown RBP4.35□□□□□ -1.71
HRD1YOL013C NSE3Q05541 303 aa4.35□□□□□ -1.71
HRD1YOL013C SSF2Q12153 453 aaPredicted RBP4.35□□□□□ -1.71
HRD1YOL013C HEM13P11353 328 aaKnown RBP4.34□□□□□ -1.71
HRD1YOL013C PRO1P32264 428 aa4.34□□□□□ -1.71
HRD1YOL013C PBP2P38151 413 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
HRD1YOL013C SEA4P38164 1038 aa4.34□□□□□ -1.71
HRD1YOL013C QNS1P38795 714 aaKnown RBP4.34□□□□□ -1.71
HRD1YOL013C BUD6P41697 788 aa4.34□□□□□ -1.71
HRD1YOL013C OSW7P43611 510 aa4.34□□□□□ -1.71
HRD1YOL013C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
HRD1YOL013C VPS72Q03388 795 aa4.34□□□□□ -1.71
HRD1YOL013C SSY1Q03770 852 aa4.34□□□□□ -1.71
HRD1YOL013C PIN2Q12057 282 aa4.34□□□□□ -1.71
HRD1YOL013C PMC1P38929 1173 aaPredicted RBP4.33□□□□□ -1.72
HRD1YOL013C IRC24P40580 263 aa4.33□□□□□ -1.72
HRD1YOL013C MAD1P40957 749 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms