RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	RSA3	Q05942	220 aa	Known RBP	3.82	□□□□□ -1.8
LYS9	YNR050C	TRM2	P33753	639 aa		3.81	□□□□□ -1.8
LYS9	YNR050C	LAM1	P38851	1228 aa		3.81	□□□□□ -1.8
LYS9	YNR050C	CDC55	Q00362	526 aa		3.81	□□□□□ -1.8
LYS9	YNR050C	UTP5	Q04177	643 aa	Known RBP	3.81	□□□□□ -1.8
LYS9	YNR050C	TAF7	Q05021	590 aa		3.81	□□□□□ -1.8
LYS9	YNR050C	SGD1	Q06132	899 aa		3.81	□□□□□ -1.8
LYS9	YNR050C	RSC58	Q07979	502 aa		3.81	□□□□□ -1.8
LYS9	YNR050C	RVS167	P39743	482 aa	Known RBP	3.8	□□□□□ -1.8
LYS9	YNR050C	MSE1	P48525	536 aa		3.8	□□□□□ -1.8
LYS9	YNR050C	MON1	P53129	644 aa		3.8	□□□□□ -1.8
LYS9	YNR050C	TRS120	Q04183	1289 aa		3.8	□□□□□ -1.8
LYS9	YNR050C	DUS4	Q06063	367 aa		3.8	□□□□□ -1.8
LYS9	YNR050C	YJL045W	P47052	634 aa		3.79	□□□□□ -1.8
LYS9	YNR050C	ENV11	P53246	860 aa		3.79	□□□□□ -1.8
LYS9	YNR050C	SUN4	P53616	420 aa		3.79	□□□□□ -1.8
LYS9	YNR050C	HRK1	Q08732	759 aa	Known RBP	3.79	□□□□□ -1.8
LYS9	YNR050C	NOG1	Q02892	647 aa	Known RBP	3.78	□□□□□ -1.8
LYS9	YNR050C	YML122C	Q03207	126 aa		3.78	□□□□□ -1.8
LYS9	YNR050C	RCL1	Q08096	367 aa	Predicted RBP	3.78	□□□□□ -1.8
LYS9	YNR050C	INP54	Q08227	384 aa	Known RBP	3.78	□□□□□ -1.8
LYS9	YNR050C	SPS1	P08458	490 aa		3.77	□□□□□ -1.81
LYS9	YNR050C	MTR4	P47047	1073 aa	Known RBP	3.77	□□□□□ -1.81
LYS9	YNR050C	ACF4	P47129	309 aa		3.77	□□□□□ -1.81
LYS9	YNR050C	ATG1	P53104	897 aa		3.77	□□□□□ -1.81
LYS9	YNR050C	PLB2	Q03674	706 aa		3.77	□□□□□ -1.81
LYS9	YNR050C	YSC84	P32793	468 aa		3.76	□□□□□ -1.81
LYS9	YNR050C	DOM34	P33309	386 aa		3.76	□□□□□ -1.81
LYS9	YNR050C	XKS1	P42826	600 aa		3.76	□□□□□ -1.81
LYS9	YNR050C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	RIP-Chip
LYS9	YNR050C	DNA2	P38859	1522 aa		3.76	□□□□□ -1.81
LYS9	YNR050C	HSE1	P38753	452 aa		3.75	□□□□□ -1.81
LYS9	YNR050C	QNS1	P38795	714 aa	Known RBP	3.75	□□□□□ -1.81
LYS9	YNR050C	CHS7	P38843	316 aa		3.75	□□□□□ -1.81
LYS9	YNR050C	SHU2	P38957	223 aa		3.75	□□□□□ -1.81
LYS9	YNR050C	KAR5	Q04746	504 aa		3.75	□□□□□ -1.81
LYS9	YNR050C	CYC1	P00044	109 aa	Predicted RBP	3.74	□□□□□ -1.81
LYS9	YNR050C	HCM1	P25364	564 aa		3.74	□□□□□ -1.81
LYS9	YNR050C	CDC20	P26309	610 aa		3.74	□□□□□ -1.81
LYS9	YNR050C	LST4	P34239	828 aa		3.74	□□□□□ -1.81
LYS9	YNR050C	CTF4	Q01454	927 aa		3.74	□□□□□ -1.81
LYS9	YNR050C	ROT1	Q03691	256 aa		3.74	□□□□□ -1.81
LYS9	YNR050C	NTO1	Q12311	748 aa		3.74	□□□□□ -1.81
LYS9	YNR050C	RAD53	P22216	821 aa		3.73	□□□□□ -1.81
LYS9	YNR050C	MSH3	P25336	1018 aa		3.73	□□□□□ -1.81
LYS9	YNR050C	GPI13	Q07830	1017 aa		3.73	□□□□□ -1.81
LYS9	YNR050C	LAP2	Q10740	671 aa		3.73	□□□□□ -1.81
LYS9	YNR050C	CDC6	P09119	513 aa		3.72	□□□□□ -1.81
LYS9	YNR050C	STE11	P23561	717 aa		3.72	□□□□□ -1.81
LYS9	YNR050C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
LYS9	YNR050C	BAP2	P38084	609 aa		3.72	□□□□□ -1.81
LYS9	YNR050C	HNT2	P49775	206 aa		3.72	□□□□□ -1.81
LYS9	YNR050C	NBA1	Q08229	501 aa	Known RBP	3.72	□□□□□ -1.81
LYS9	YNR050C	YOR352W	Q08816	343 aa		3.72	□□□□□ -1.81
LYS9	YNR050C	SPO21	Q12411	609 aa		3.72	□□□□□ -1.81
LYS9	YNR050C	SRM1	P21827	482 aa		3.71	□□□□□ -1.81
LYS9	YNR050C	PMI40	P29952	429 aa	Known RBP	3.71	□□□□□ -1.81
LYS9	YNR050C	AIM21	P40563	679 aa		3.71	□□□□□ -1.81
LYS9	YNR050C	SEC26	P41810	973 aa	Known RBP	3.71	□□□□□ -1.81
LYS9	YNR050C	MNN10	P50108	393 aa	Known RBP	3.71	□□□□□ -1.81
LYS9	YNR050C	YNR063W	P53749	607 aa		3.71	□□□□□ -1.81
LYS9	YNR050C	YCS4	Q06156	1176 aa		3.71	□□□□□ -1.81
LYS9	YNR050C	TRL1	P09880	827 aa	Known RBP	3.7	□□□□□ -1.82
LYS9	YNR050C	VMA4	P22203	233 aa	Known RBP	3.7	□□□□□ -1.82
LYS9	YNR050C	RDH54	P38086	958 aa		3.7	□□□□□ -1.82
LYS9	YNR050C	MCM6	P53091	1017 aa	Known RBP	3.7	□□□□□ -1.82
LYS9	YNR050C	TMA10	Q06177	86 aa		3.7	□□□□□ -1.82
LYS9	YNR050C	ACK1	Q07622	623 aa	Predicted RBP	3.7	□□□□□ -1.82
LYS9	YNR050C	NOC3	Q07896	663 aa	Predicted RBP	3.7	□□□□□ -1.82
LYS9	YNR050C	PHO23	P50947	330 aa		3.7	□□□□□ -1.82
LYS9	YNR050C	RKM2	Q03942	479 aa		3.7	□□□□□ -1.82
LYS9	YNR050C	SUB2	Q07478	446 aa	Known RBP	3.7	□□□□□ -1.82
LYS9	YNR050C	COQ4	O13525	335 aa		3.69	□□□□□ -1.82
LYS9	YNR050C	GAL10	P04397	699 aa		3.69	□□□□□ -1.82
LYS9	YNR050C	HEM13	P11353	328 aa	Known RBP	3.69	□□□□□ -1.82
LYS9	YNR050C	SNF5	P18480	905 aa		3.69	□□□□□ -1.82
LYS9	YNR050C	AFG2	P32794	780 aa		3.69	□□□□□ -1.82
LYS9	YNR050C	VPS53	P47061	822 aa		3.69	□□□□□ -1.82
LYS9	YNR050C	PEX13	P80667	386 aa		3.69	□□□□□ -1.82
LYS9	YNR050C	PMA1	P05030	918 aa	Known RBP	3.68	□□□□□ -1.82
LYS9	YNR050C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.68	□□□□□ -1.82	not detected
LYS9	YNR050C	KIP1	P28742	1111 aa		3.68	□□□□□ -1.82
LYS9	YNR050C	UGA4	P32837	571 aa		3.68	□□□□□ -1.82
LYS9	YNR050C	PIK1	P39104	1066 aa		3.68	□□□□□ -1.82
LYS9	YNR050C	RXT3	Q07458	294 aa		3.68	□□□□□ -1.82
LYS9	YNR050C	ADD66	P36040	267 aa		3.67	□□□□□ -1.82
LYS9	YNR050C	CCZ1	P38273	704 aa		3.67	□□□□□ -1.82
LYS9	YNR050C	TNA1	P53322	534 aa		3.67	□□□□□ -1.82
LYS9	YNR050C	KIN4	Q01919	800 aa		3.67	□□□□□ -1.82
LYS9	YNR050C	GPB1	Q08886	897 aa		3.67	□□□□□ -1.82
LYS9	YNR050C	RIB2	Q12362	591 aa	Known RBP	3.67	□□□□□ -1.82
LYS9	YNR050C	FRT1	Q99332	602 aa		3.67	□□□□□ -1.82
LYS9	YNR050C	GPB2	P39717	880 aa		3.66	□□□□□ -1.82
LYS9	YNR050C	VPS62	P53285	467 aa		3.66	□□□□□ -1.82
LYS9	YNR050C	HOS3	Q02959	697 aa	Known RBP	3.66	□□□□□ -1.82
LYS9	YNR050C	KOG1	P38873	1557 aa		3.65	□□□□□ -1.82
LYS9	YNR050C	CMP2	P14747	604 aa		3.65	□□□□□ -1.83
LYS9	YNR050C	DCG1	P32460	244 aa		3.65	□□□□□ -1.83
LYS9	YNR050C	DEF1	P35732	738 aa	Known RBP	3.65	□□□□□ -1.83
LYS9	YNR050C	PEX28	P38848	579 aa		3.65	□□□□□ -1.83

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