RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	CYT1	P07143	309 aa		7.66	□□□□□ -1.18
CSL4	YNL232W	RGP1	P16664	663 aa		7.66	□□□□□ -1.18
CSL4	YNL232W	PNT1	P38969	423 aa		7.66	□□□□□ -1.18
CSL4	YNL232W	AOS1	Q06624	347 aa		7.66	□□□□□ -1.18
CSL4	YNL232W	HPR1	P17629	752 aa	Known RBP	7.65	□□□□□ -1.18
CSL4	YNL232W	KCC4	P25389	1037 aa		7.65	□□□□□ -1.18
CSL4	YNL232W	MOT2	P34909	587 aa	Known RBP	7.65	□□□□□ -1.18
CSL4	YNL232W	SLN1	P39928	1220 aa	Predicted RBP	7.65	□□□□□ -1.18
CSL4	YNL232W	KTR7	P40504	517 aa		7.65	□□□□□ -1.18
CSL4	YNL232W	HGH1	P48362	394 aa	Known RBP	7.65	□□□□□ -1.18
CSL4	YNL232W	SYF1	Q04048	859 aa	Predicted RBP	7.65	□□□□□ -1.18
CSL4	YNL232W	SSP2	Q08646	371 aa		7.65	□□□□□ -1.18
CSL4	YNL232W	YDR215C	Q12240	137 aa		7.65	□□□□□ -1.18
CSL4	YNL232W	YPR117W	Q06116	2489 aa		7.64	□□□□□ -1.19
CSL4	YNL232W	KAR2	P16474	682 aa	Known RBP	7.64	□□□□□ -1.19
CSL4	YNL232W	MET1	P36150	593 aa		7.64	□□□□□ -1.19
CSL4	YNL232W	STV1	P37296	890 aa		7.64	□□□□□ -1.19
CSL4	YNL232W	AKL1	P38080	1108 aa	Known RBP	7.64	□□□□□ -1.19
CSL4	YNL232W	ACS2	P52910	683 aa	Known RBP	7.64	□□□□□ -1.19
CSL4	YNL232W	SBP1	P10080	294 aa	Known RBP	7.62	□□□□□ -1.19
CSL4	YNL232W	AFG2	P32794	780 aa		7.61	□□□□□ -1.19
CSL4	YNL232W	APE3	P37302	537 aa	Known RBP	7.61	□□□□□ -1.19
CSL4	YNL232W	RRT6	P53117	311 aa	Predicted RBP	7.61	□□□□□ -1.19
CSL4	YNL232W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	7.61	□□□□□ -1.19	not detected
CSL4	YNL232W	GAS5	Q08193	484 aa		7.61	□□□□□ -1.19
CSL4	YNL232W	PHO87	P25360	923 aa		7.6	□□□□□ -1.19
CSL4	YNL232W	YVH1	Q02256	364 aa	Known RBP	7.6	□□□□□ -1.19
CSL4	YNL232W	MCA1	Q08601	432 aa		7.6	□□□□□ -1.19
CSL4	YNL232W	HAT1	Q12341	374 aa		7.6	□□□□□ -1.19
CSL4	YNL232W	LYS2	P07702	1392 aa		7.59	□□□□□ -1.19
CSL4	YNL232W	RPP1A	P05318	106 aa	Predicted RBP	7.59	□□□□□ -1.19
CSL4	YNL232W	APL2	P36000	726 aa	Predicted RBP	7.59	□□□□□ -1.19
CSL4	YNL232W	MTO1	P53070	669 aa		7.59	□□□□□ -1.19
CSL4	YNL232W	CRF1	Q04930	467 aa		7.59	□□□□□ -1.19
CSL4	YNL232W	SSK22	P25390	1331 aa	Predicted RBP	7.58	□□□□□ -1.2
CSL4	YNL232W	TAO3	P40468	2376 aa		7.58	□□□□□ -1.2
CSL4	YNL232W	PAP2	P53632	584 aa	Known RBP	7.58	□□□□□ -1.2
CSL4	YNL232W	RRG1	Q12167	365 aa	Predicted RBP	7.58	□□□□□ -1.2
CSL4	YNL232W	AMN1	P38285	549 aa	Predicted RBP	7.57	□□□□□ -1.2
CSL4	YNL232W	CBP1	P07252	654 aa		7.56	□□□□□ -1.2
CSL4	YNL232W	HAP4	P14064	554 aa		7.56	□□□□□ -1.2
CSL4	YNL232W	RBA50	Q04418	439 aa		7.56	□□□□□ -1.2
CSL4	YNL232W	PRY1	P47032	299 aa		7.55	□□□□□ -1.2
CSL4	YNL232W	UTP4	Q06679	776 aa	Known RBP	7.55	□□□□□ -1.2
CSL4	YNL232W	TAT1	P38085	619 aa		7.54	□□□□□ -1.2
CSL4	YNL232W	HXT5	P38695	592 aa		7.54	□□□□□ -1.2
CSL4	YNL232W	PRK1	P40494	810 aa		7.54	□□□□□ -1.2
CSL4	YNL232W	ROM1	P53046	1155 aa		7.54	□□□□□ -1.2
CSL4	YNL232W	KRE2	P27809	442 aa		7.53	□□□□□ -1.2
CSL4	YNL232W	NGR1	P32831	672 aa	Known RBP	7.53	□□□□□ -1.2
CSL4	YNL232W	LSB6	P42951	607 aa		7.53	□□□□□ -1.2
CSL4	YNL232W	SKP1	P52286	194 aa		7.53	□□□□□ -1.2
CSL4	YNL232W	HEH2	Q03281	663 aa		7.53	□□□□□ -1.2
CSL4	YNL232W	FLO11	P08640	1367 aa		7.53	□□□□□ -1.2
CSL4	YNL232W	FBP1	P09201	348 aa		7.52	□□□□□ -1.21
CSL4	YNL232W	GAL2	P13181	574 aa		7.52	□□□□□ -1.21
CSL4	YNL232W	SCD5	P34758	872 aa		7.52	□□□□□ -1.21
CSL4	YNL232W	CUS1	Q02554	436 aa	Predicted RBP	7.52	□□□□□ -1.21
CSL4	YNL232W	SEN54	Q02825	467 aa	Predicted RBP	7.52	□□□□□ -1.21
CSL4	YNL232W	SGD1	Q06132	899 aa		7.52	□□□□□ -1.21
CSL4	YNL232W	KAP122	P32767	1081 aa		7.51	□□□□□ -1.21
CSL4	YNL232W	PGM2	P37012	569 aa	Known RBP	7.51	□□□□□ -1.21
CSL4	YNL232W	GSM1	P42950	618 aa		7.51	□□□□□ -1.21
CSL4	YNL232W	VPS64	Q03944	604 aa		7.51	□□□□□ -1.21
CSL4	YNL232W	SIS2	P36024	562 aa		7.5	□□□□□ -1.21
CSL4	YNL232W	NCL1	P38205	684 aa	Known RBP	7.5	□□□□□ -1.21
CSL4	YNL232W	ALG14	P38242	237 aa		7.5	□□□□□ -1.21
CSL4	YNL232W	YNR040W	P53736	256 aa		7.5	□□□□□ -1.21
CSL4	YNL232W	NHA1	Q99271	985 aa		7.5	□□□□□ -1.21
CSL4	YNL232W	ZDS2	P54786	942 aa		7.49	□□□□□ -1.21
CSL4	YNL232W	NSE3	Q05541	303 aa		7.49	□□□□□ -1.21
CSL4	YNL232W	YLR225C	Q05948	407 aa	Known RBP	7.49	□□□□□ -1.21
CSL4	YNL232W	PAH1	P32567	862 aa		7.48	□□□□□ -1.21
CSL4	YNL232W	TPS3	P38426	1054 aa	Known RBP	7.48	□□□□□ -1.21
CSL4	YNL232W	UBX2	Q04228	584 aa		7.48	□□□□□ -1.21
CSL4	YNL232W	PDS5	Q04264	1277 aa		7.48	□□□□□ -1.21
CSL4	YNL232W	RPC31	P17890	251 aa		7.47	□□□□□ -1.21
CSL4	YNL232W	NAR1	P23503	491 aa	Known RBP	7.47	□□□□□ -1.21
CSL4	YNL232W	SPL2	P38839	148 aa		7.47	□□□□□ -1.21
CSL4	YNL232W	MTC3	P53077	123 aa		7.47	□□□□□ -1.21
CSL4	YNL232W	RPT4	P53549	437 aa	Known RBP	7.47	□□□□□ -1.21
CSL4	YNL232W	ULP1	Q02724	621 aa		7.47	□□□□□ -1.21
CSL4	YNL232W	PRP42	Q03776	544 aa	Known RBP	7.47	□□□□□ -1.21
CSL4	YNL232W	APM2	P38700	605 aa		7.46	□□□□□ -1.22
CSL4	YNL232W	GLT1	Q12680	2145 aa	Known RBP	7.46	□□□□□ -1.22
CSL4	YNL232W	VAN1	P23642	535 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	TGL4	P36165	910 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	NIT1	P40447	199 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	QDR2	P40474	542 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	BUD9	P53226	547 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	YNL050C	P53952	270 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	YPL034W	Q03083	165 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	FCP1	Q03254	732 aa		7.45	□□□□□ -1.22
CSL4	YNL232W	TTI1	P36097	1038 aa		7.44	□□□□□ -1.22
CSL4	YNL232W	ECM23	Q02710	187 aa		7.44	□□□□□ -1.22
CSL4	YNL232W	GIS4	Q04233	774 aa		7.44	□□□□□ -1.22
CSL4	YNL232W	TOS4	Q06266	489 aa		7.44	□□□□□ -1.22
CSL4	YNL232W	SUV3	P32580	737 aa		7.43	□□□□□ -1.22
CSL4	YNL232W	LEO1	P38439	464 aa		7.43	□□□□□ -1.22
CSL4	YNL232W	PSF2	P40359	213 aa		7.43	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms