RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C FRT1Q99332 602 aa6.64□□□□□ -1.35
VPS20YMR077C SOD2P00447 233 aa6.63□□□□□ -1.35
VPS20YMR077C VMA4P22203 233 aaKnown RBP6.63□□□□□ -1.35
VPS20YMR077C UTP5Q04177 643 aaKnown RBP6.63□□□□□ -1.35
VPS20YMR077C SRO9P25567 434 aaKnown RBP6.62□□□□□ -1.35
VPS20YMR077C ETP1P38748 585 aaKnown RBP6.62□□□□□ -1.35
VPS20YMR077C SNO2P53823 222 aa6.62□□□□□ -1.35
VPS20YMR077C RSA3Q05942 220 aaKnown RBP6.62□□□□□ -1.35
VPS20YMR077C MSH3P25336 1018 aa6.61□□□□□ -1.35
VPS20YMR077C ENV11P53246 860 aa6.61□□□□□ -1.35
VPS20YMR077C KAR2P16474 682 aaKnown RBP6.6□□□□□ -1.35
VPS20YMR077C XKS1P42826 600 aa6.6□□□□□ -1.35
VPS20YMR077C GCD6P32501 712 aaKnown RBP6.58□□□□□ -1.36
VPS20YMR077C PRP40P33203 583 aaKnown RBP6.58□□□□□ -1.36
VPS20YMR077C VPS35P34110 944 aa6.58□□□□□ -1.36
VPS20YMR077C RSM26P47141 266 aa6.58□□□□□ -1.36
VPS20YMR077C PEX13P80667 386 aa6.58□□□□□ -1.36
VPS20YMR077C RKM2Q03942 479 aa6.58□□□□□ -1.36
VPS20YMR077C YPL277CQ08989 487 aa6.58□□□□□ -1.36
VPS20YMR077C HAT1Q12341 374 aa6.58□□□□□ -1.36
VPS20YMR077C RPS13P05756 151 aaKnown RBP6.57□□□□□ -1.36
VPS20YMR077C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
VPS20YMR077C TOD6P34219 525 aa6.57□□□□□ -1.36
VPS20YMR077C SQT1P35184 431 aa6.57□□□□□ -1.36
VPS20YMR077C NMD3P38861 518 aaKnown RBP6.57□□□□□ -1.36
VPS20YMR077C VPS53P47061 822 aa6.57□□□□□ -1.36
VPS20YMR077C AIM26P32858 118 aa6.56□□□□□ -1.36
VPS20YMR077C GEF1P37020 779 aa6.56□□□□□ -1.36
VPS20YMR077C QNS1P38795 714 aaKnown RBP6.56□□□□□ -1.36
VPS20YMR077C GSF2Q04697 403 aaKnown RBP6.56□□□□□ -1.36
VPS20YMR077C NBA1Q08229 501 aaKnown RBP6.56□□□□□ -1.36
VPS20YMR077C YJL045WP47052 634 aa6.55□□□□□ -1.36
VPS20YMR077C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
VPS20YMR077C ULP1Q02724 621 aa6.54□□□□□ -1.36
VPS20YMR077C YLR358CO13565 187 aa6.53□□□□□ -1.36
VPS20YMR077C YSC84P32793 468 aa6.53□□□□□ -1.36
VPS20YMR077C ADD66P36040 267 aa6.53□□□□□ -1.36
VPS20YMR077C YNR063WP53749 607 aa6.53□□□□□ -1.36
VPS20YMR077C RSC58Q07979 502 aa6.53□□□□□ -1.36
VPS20YMR077C SPS1P08458 490 aa6.52□□□□□ -1.37
VPS20YMR077C RDH54P38086 958 aa6.52□□□□□ -1.37
VPS20YMR077C PEX28P38848 579 aa6.52□□□□□ -1.37
VPS20YMR077C YOR352WQ08816 343 aa6.52□□□□□ -1.37
VPS20YMR077C YHL050CP38721 697 aa6.51□□□□□ -1.37
VPS20YMR077C YHR219WP38900 624 aa6.51□□□□□ -1.37
VPS20YMR077C CLU1Q03690 1277 aaKnown RBP6.51□□□□□ -1.37
VPS20YMR077C DAL4Q04895 635 aa6.51□□□□□ -1.37
VPS20YMR077C OXR1Q08952 273 aa6.51□□□□□ -1.37
VPS20YMR077C COQ4O13525 335 aa6.5□□□□□ -1.37
VPS20YMR077C PHO4P07270 312 aaKnown RBP6.5□□□□□ -1.37
VPS20YMR077C PRE10P21242 288 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
VPS20YMR077C UGA4P32837 571 aa6.49□□□□□ -1.37
VPS20YMR077C CCZ1P38273 704 aa6.49□□□□□ -1.37
VPS20YMR077C HNT2P49775 206 aa6.49□□□□□ -1.37
VPS20YMR077C YGL140CP53120 1219 aa6.48□□□□□ -1.37
VPS20YMR077C ADI1Q03677 179 aa6.48□□□□□ -1.37
VPS20YMR077C ABZ1P37254 787 aaPredicted RBP6.47□□□□□ -1.37
VPS20YMR077C SGD1Q06132 899 aa6.47□□□□□ -1.37
VPS20YMR077C YPL109CQ02981 657 aa6.46□□□□□ -1.38
VPS20YMR077C YDR132CQ03900 495 aa6.46□□□□□ -1.38
VPS20YMR077C EST2Q06163 884 aa6.46□□□□□ -1.38
VPS20YMR077C SEC23P15303 768 aaKnown RBP6.45□□□□□ -1.38
VPS20YMR077C BAP2P38084 609 aa6.45□□□□□ -1.38
VPS20YMR077C PPX1P38698 397 aa6.45□□□□□ -1.38
VPS20YMR077C SEC26P41810 973 aaKnown RBP6.45□□□□□ -1.38
VPS20YMR077C TNA1P53322 534 aa6.45□□□□□ -1.38
VPS20YMR077C TAF13P11747 167 aa6.44□□□□□ -1.38
VPS20YMR077C KIP1P28742 1111 aa6.44□□□□□ -1.38
VPS20YMR077C SHM2P37291 469 aaKnown RBP6.44□□□□□ -1.38
VPS20YMR077C LAM1P38851 1228 aa6.44□□□□□ -1.38
VPS20YMR077C DAK2P43550 591 aa6.44□□□□□ -1.38
VPS20YMR077C HOS3Q02959 697 aaKnown RBP6.44□□□□□ -1.38
VPS20YMR077C CTS1P29029 562 aa6.43□□□□□ -1.38
VPS20YMR077C MEF2P39677 819 aa6.43□□□□□ -1.38
VPS20YMR077C SPT20P50875 604 aa6.43□□□□□ -1.38
VPS20YMR077C GIS1Q03833 894 aa6.43□□□□□ -1.38
VPS20YMR077C RSB1Q08417 382 aa6.43□□□□□ -1.38
VPS20YMR077C PTC5Q12511 572 aa6.43□□□□□ -1.38
VPS20YMR077C TUB2P02557 457 aaKnown RBP6.42□□□□□ -1.38
VPS20YMR077C MET4P32389 672 aa6.42□□□□□ -1.38
VPS20YMR077C TAT2P38967 592 aa6.42□□□□□ -1.38
VPS20YMR077C STM1P39015 273 aaKnown RBP6.42□□□□□ -1.38
VPS20YMR077C PIK1P39104 1066 aa6.42□□□□□ -1.38
VPS20YMR077C RPN3P40016 523 aaKnown RBP6.42□□□□□ -1.38
VPS20YMR077C GCN5Q03330 439 aa6.42□□□□□ -1.38
VPS20YMR077C RCL1Q08096 367 aaPredicted RBP6.42□□□□□ -1.38
VPS20YMR077C HEM13P11353 328 aaKnown RBP6.41□□□□□ -1.38
VPS20YMR077C AFG2P32794 780 aa6.41□□□□□ -1.38
VPS20YMR077C MPT5P39016 859 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
VPS20YMR077C YPL260WQ08977 551 aa6.41□□□□□ -1.38
VPS20YMR077C PUF4P25339 888 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
VPS20YMR077C CYC1P00044 109 aaPredicted RBP6.39□□□□□ -1.39
VPS20YMR077C DOM34P33309 386 aa6.39□□□□□ -1.39
VPS20YMR077C MSC6Q08818 692 aaKnown RBP6.39□□□□□ -1.39
VPS20YMR077C ALG3P38179 458 aa6.38□□□□□ -1.39
VPS20YMR077C SSF1P38789 453 aaPredicted RBP6.38□□□□□ -1.39
VPS20YMR077C GPB2P39717 880 aa6.38□□□□□ -1.39
VPS20YMR077C TOS4Q06266 489 aa6.38□□□□□ -1.39
VPS20YMR077C PNS1Q12412 539 aa6.38□□□□□ -1.39
VPS20YMR077C HXK1P04806 485 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms