RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A TIF6Q12522 245 aaKnown RBP14.42□□□□□ -0.1
LSM3YLR438C-A VMA2P16140 517 aaKnown RBP14.41□□□□□ -0.1
LSM3YLR438C-A PHO88P38264 188 aaPredicted RBP14.41□□□□□ -0.1
LSM3YLR438C-A ETP1P38748 585 aaKnown RBP14.41□□□□□ -0.1
LSM3YLR438C-A FMS1P50264 508 aa14.41□□□□□ -0.1
LSM3YLR438C-A YGL138CP53122 345 aa14.41□□□□□ -0.1
LSM3YLR438C-A FAR11P53917 953 aa14.41□□□□□ -0.1
LSM3YLR438C-A CSM3Q04659 317 aa14.41□□□□□ -0.1
LSM3YLR438C-A GET3Q12154 354 aaKnown RBP14.41□□□□□ -0.1
LSM3YLR438C-A VPS1P21576 704 aaKnown RBP14.4□□□□□ -0.1
LSM3YLR438C-A SPR3P41901 512 aa14.4□□□□□ -0.1
LSM3YLR438C-A BNI5P53890 448 aaKnown RBP14.4□□□□□ -0.1
LSM3YLR438C-A ALD6P54115 500 aaKnown RBP14.4□□□□□ -0.1
LSM3YLR438C-A PEX19Q07418 342 aa14.4□□□□□ -0.1
LSM3YLR438C-A IXR1P33417 597 aa14.39□□□□□ -0.11
LSM3YLR438C-A ASH1P34233 588 aa14.39□□□□□ -0.11
LSM3YLR438C-A ERG7P38604 731 aa14.39□□□□□ -0.11
LSM3YLR438C-A DCS2Q12123 353 aa14.39□□□□□ -0.11
LSM3YLR438C-A TIP41Q12199 356 aa14.39□□□□□ -0.11
LSM3YLR438C-A RGP1P16664 663 aa14.38□□□□□ -0.11
LSM3YLR438C-A GPB2P39717 880 aa14.38□□□□□ -0.11
LSM3YLR438C-A HYR1P40581 163 aaKnown RBP14.38□□□□□ -0.11
LSM3YLR438C-A HXK1P04806 485 aaKnown RBP14.37□□□□□ -0.11
LSM3YLR438C-A SAM1P10659 382 aaKnown RBP14.37□□□□□ -0.11
LSM3YLR438C-A CDC60P26637 1090 aaKnown RBP14.37□□□□□ -0.11
LSM3YLR438C-A RTC4P53850 401 aa14.37□□□□□ -0.11
LSM3YLR438C-A SES1P07284 462 aaKnown RBP14.36□□□□□ -0.11
LSM3YLR438C-A THR4P16120 514 aaKnown RBP14.36□□□□□ -0.11
LSM3YLR438C-A MSP1P28737 362 aa14.36□□□□□ -0.11
LSM3YLR438C-A EIS1Q05050 843 aaKnown RBP14.36□□□□□ -0.11
LSM3YLR438C-A RKM4Q12504 494 aa14.36□□□□□ -0.11
LSM3YLR438C-A CDC19P00549 500 aaKnown RBP14.35□□□□□ -0.11
LSM3YLR438C-A PKC1P24583 1151 aa14.35□□□□□ -0.11
LSM3YLR438C-A MOT2P34909 587 aaKnown RBP14.35□□□□□ -0.11
LSM3YLR438C-A NDT80P38830 627 aa14.35□□□□□ -0.11
LSM3YLR438C-A LIF1P53150 421 aa14.35□□□□□ -0.11
LSM3YLR438C-A RET3P53600 189 aa14.35□□□□□ -0.11
LSM3YLR438C-A DSE4P53753 1117 aa14.35□□□□□ -0.11
LSM3YLR438C-A HAP5Q02516 242 aa14.35□□□□□ -0.11
LSM3YLR438C-A TRS120Q04183 1289 aa14.35□□□□□ -0.11
LSM3YLR438C-A SPH1Q06160 661 aa14.35□□□□□ -0.11
LSM3YLR438C-A YOR296WQ08748 1289 aa14.35□□□□□ -0.11
LSM3YLR438C-A OXR1Q08952 273 aa14.35□□□□□ -0.11
LSM3YLR438C-A TY3A-GQ12173 290 aa14.35□□□□□ -0.11
LSM3YLR438C-A TY3A-IQ99219 290 aa14.35□□□□□ -0.11
LSM3YLR438C-A KEX1P09620 729 aa14.34□□□□□ -0.11
LSM3YLR438C-A SRO9P25567 434 aaKnown RBP14.34□□□□□ -0.11
LSM3YLR438C-A UTR4P32626 227 aa14.34□□□□□ -0.11
LSM3YLR438C-A TGL1P34163 548 aa14.34□□□□□ -0.11
LSM3YLR438C-A PAN5P38787 379 aa14.34□□□□□ -0.11
LSM3YLR438C-A TMA64Q04600 565 aaKnown RBP14.34□□□□□ -0.11
LSM3YLR438C-A SLK19Q08581 821 aaKnown RBP14.34□□□□□ -0.11
LSM3YLR438C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data14.34□□□□□ -0.11not detected
LSM3YLR438C-A EUG1P32474 517 aa14.33□□□□□ -0.12
LSM3YLR438C-A SUL1P38359 859 aa14.33□□□□□ -0.12
LSM3YLR438C-A CCT5P40413 562 aaKnown RBP14.33□□□□□ -0.12
LSM3YLR438C-A RSM25P40496 264 aa14.33□□□□□ -0.12
LSM3YLR438C-A ETT1Q08421 412 aaKnown RBP14.33□□□□□ -0.12
LSM3YLR438C-A TY1B-AO13527 1196 aaKnown RBP14.32□□□□□ -0.12
LSM3YLR438C-A STT3P39007 718 aaKnown RBP14.32□□□□□ -0.12
LSM3YLR438C-A ATG1P53104 897 aa14.32□□□□□ -0.12
LSM3YLR438C-A DUS1P53759 423 aaKnown RBP14.32□□□□□ -0.12
LSM3YLR438C-A MBR1P23493 339 aa14.31□□□□□ -0.12
LSM3YLR438C-A ELM1P32801 640 aa14.31□□□□□ -0.12
LSM3YLR438C-A ORC6P38826 435 aa14.31□□□□□ -0.12
LSM3YLR438C-A YGR125WP53273 1036 aa14.31□□□□□ -0.12
LSM3YLR438C-A GUD1Q07729 489 aa14.31□□□□□ -0.12
LSM3YLR438C-A SRF1Q12516 437 aa14.31□□□□□ -0.12
LSM3YLR438C-A SRP40P32583 406 aaPredicted RBP14.3□□□□□ -0.12
LSM3YLR438C-A MCR1P36060 302 aaKnown RBP14.3□□□□□ -0.12
LSM3YLR438C-A RRD1P40454 393 aaKnown RBP14.3□□□□□ -0.12
LSM3YLR438C-A CIR1P42940 261 aa14.3□□□□□ -0.12
LSM3YLR438C-A SDA1P53313 767 aaKnown RBP14.3□□□□□ -0.12
LSM3YLR438C-A SGD1Q06132 899 aa14.3□□□□□ -0.12
LSM3YLR438C-A APC11Q12157 165 aa14.3□□□□□ -0.12
LSM3YLR438C-A TUF1P02992 437 aaKnown RBP14.29□□□□□ -0.12
LSM3YLR438C-A ALG1P16661 449 aa14.29□□□□□ -0.12
LSM3YLR438C-A GSY1P23337 708 aa14.29□□□□□ -0.12
LSM3YLR438C-A UGA4P32837 571 aa14.29□□□□□ -0.12
LSM3YLR438C-A CIT3P43635 486 aa14.29□□□□□ -0.12
LSM3YLR438C-A HUL5P53119 910 aa14.29□□□□□ -0.12
LSM3YLR438C-A YGR273CP53329 174 aa14.29□□□□□ -0.12
LSM3YLR438C-A AIM33Q04516 312 aa14.29□□□□□ -0.12
LSM3YLR438C-A YLR225CQ05948 407 aaKnown RBP14.29□□□□□ -0.12
LSM3YLR438C-A AIM44Q99299 758 aa14.29□□□□□ -0.12
LSM3YLR438C-A SHP1P34223 423 aa14.28□□□□□ -0.12
LSM3YLR438C-A ARL1P38116 183 aaKnown RBP14.28□□□□□ -0.12
LSM3YLR438C-A RFT1P38206 574 aaPredicted RBP14.28□□□□□ -0.12
LSM3YLR438C-A OYE2Q03558 400 aaKnown RBP14.28□□□□□ -0.12
LSM3YLR438C-A DUS3Q06053 668 aaKnown RBP14.28□□□□□ -0.12
LSM3YLR438C-A MMR1Q06324 491 aa14.28□□□□□ -0.12
LSM3YLR438C-A ARP6Q12509 438 aa14.28□□□□□ -0.12
LSM3YLR438C-A PTC5Q12511 572 aa14.28□□□□□ -0.12
LSM3YLR438C-A PHR1P05066 565 aaKnown RBP RIP-Chip data14.27□□□□□ -0.13not detected
LSM3YLR438C-A FRS2P15625 503 aaKnown RBP14.27□□□□□ -0.13
LSM3YLR438C-A URA1P28272 314 aaPredicted RBP14.27□□□□□ -0.13
LSM3YLR438C-A YLH47Q06493 454 aa14.27□□□□□ -0.13
LSM3YLR438C-A DDP1Q99321 188 aaKnown RBP14.27□□□□□ -0.13
LSM3YLR438C-A ROX1P25042 368 aa14.26□□□□□ -0.13
LSM3YLR438C-A MFM1Q02783 413 aa14.26□□□□□ -0.13
Retrieved 100 of 5,963 RNA–protein pairs in 93.9 ms