RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W DOT1Q04089 582 aaKnown RBP7.26□□□□□ -1.25
CTR3YLR411W RGA2Q06407 1009 aa7.26□□□□□ -1.25
CTR3YLR411W TAF13P11747 167 aa7.24□□□□□ -1.25
CTR3YLR411W PGM1P33401 570 aaKnown RBP7.24□□□□□ -1.25
CTR3YLR411W GPT2P36148 743 aa7.24□□□□□ -1.25
CTR3YLR411W PAM1P37304 830 aaKnown RBP7.24□□□□□ -1.25
CTR3YLR411W LSB3P43603 459 aaKnown RBP7.24□□□□□ -1.25
CTR3YLR411W YGR045CP53229 120 aa7.24□□□□□ -1.25
CTR3YLR411W SVF1Q05515 481 aa7.24□□□□□ -1.25
CTR3YLR411W SMC4Q12267 1418 aa7.24□□□□□ -1.25
CTR3YLR411W ATG2P53855 1592 aa7.24□□□□□ -1.25
CTR3YLR411W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
CTR3YLR411W SPO74P45819 413 aa7.23□□□□□ -1.25
CTR3YLR411W TRM732Q03496 1420 aa7.23□□□□□ -1.25
CTR3YLR411W KOG1P38873 1557 aa7.23□□□□□ -1.25
CTR3YLR411W SPP41P38904 1435 aa7.22□□□□□ -1.25
CTR3YLR411W GCR1P07261 785 aa7.22□□□□□ -1.25
CTR3YLR411W NAM7P30771 971 aaKnown RBP7.22□□□□□ -1.25
CTR3YLR411W GNP1P48813 663 aa7.22□□□□□ -1.25
CTR3YLR411W HDA2Q06629 674 aa7.22□□□□□ -1.25
CTR3YLR411W AVO1Q08236 1176 aa7.22□□□□□ -1.25
CTR3YLR411W RPO31P04051 1460 aa7.22□□□□□ -1.25
CTR3YLR411W ADD66P36040 267 aa7.21□□□□□ -1.26
CTR3YLR411W AKR1P39010 764 aa7.21□□□□□ -1.26
CTR3YLR411W ELA1P53861 379 aaPredicted RBP7.21□□□□□ -1.26
CTR3YLR411W GIC2Q06648 383 aa7.21□□□□□ -1.26
CTR3YLR411W TOP2P06786 1428 aaKnown RBP7.2□□□□□ -1.26
CTR3YLR411W PET112P33893 541 aa7.2□□□□□ -1.26
CTR3YLR411W SAF1P38352 637 aa7.2□□□□□ -1.26
CTR3YLR411W YAR028WP39548 234 aa7.2□□□□□ -1.26
CTR3YLR411W EST2Q06163 884 aa7.2□□□□□ -1.26
CTR3YLR411W MRL1Q06815 381 aa7.2□□□□□ -1.26
CTR3YLR411W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
CTR3YLR411W SCC2Q04002 1493 aa7.19□□□□□ -1.26
CTR3YLR411W COQ2P32378 372 aa7.19□□□□□ -1.26
CTR3YLR411W MNR2P35724 969 aa7.19□□□□□ -1.26
CTR3YLR411W MSH4P40965 878 aaPredicted RBP7.19□□□□□ -1.26
CTR3YLR411W SIW14P53965 281 aa7.19□□□□□ -1.26
CTR3YLR411W RKM2Q03942 479 aa7.19□□□□□ -1.26
CTR3YLR411W NUP170P38181 1502 aa7.18□□□□□ -1.26
CTR3YLR411W BPT1P14772 1559 aa7.18□□□□□ -1.26
CTR3YLR411W RKR1Q04781 1562 aa7.18□□□□□ -1.26
CTR3YLR411W NAP1P25293 417 aaKnown RBP7.18□□□□□ -1.26
CTR3YLR411W ATG14P38270 344 aa7.18□□□□□ -1.26
CTR3YLR411W HXT13P39924 564 aa7.18□□□□□ -1.26
CTR3YLR411W ENT3P47160 408 aa7.18□□□□□ -1.26
CTR3YLR411W HXT17P53631 564 aa7.18□□□□□ -1.26
CTR3YLR411W HXT15P54854 567 aa7.18□□□□□ -1.26
CTR3YLR411W RTT10Q08924 1013 aa7.18□□□□□ -1.26
CTR3YLR411W SMY2P32909 740 aaKnown RBP7.17□□□□□ -1.26
CTR3YLR411W DUT1P33317 147 aa7.17□□□□□ -1.26
CTR3YLR411W YNR063WP53749 607 aa7.17□□□□□ -1.26
CTR3YLR411W ROD1Q02805 837 aa7.17□□□□□ -1.26
CTR3YLR411W JIP5Q06214 492 aaPredicted RBP7.17□□□□□ -1.26
CTR3YLR411W LAP2Q10740 671 aa7.17□□□□□ -1.26
CTR3YLR411W YLR122CQ12312 125 aa7.17□□□□□ -1.26
CTR3YLR411W AFG2P32794 780 aa7.16□□□□□ -1.26
CTR3YLR411W NNK1P36003 928 aa7.16□□□□□ -1.26
CTR3YLR411W PEP1P32319 1579 aa7.16□□□□□ -1.26
CTR3YLR411W DED1P06634 604 aaKnown RBP7.15□□□□□ -1.26
CTR3YLR411W RPS4AP0CX35 261 aaKnown RBP7.15□□□□□ -1.26
CTR3YLR411W RPS4BP0CX36 261 aaKnown RBP7.15□□□□□ -1.26
CTR3YLR411W CDC34P14682 295 aa7.15□□□□□ -1.26
CTR3YLR411W NFS1P25374 497 aa7.15□□□□□ -1.26
CTR3YLR411W HSE1P38753 452 aa7.15□□□□□ -1.26
CTR3YLR411W ALT1P52893 592 aa7.15□□□□□ -1.26
CTR3YLR411W KAE1P36132 386 aa7.14□□□□□ -1.27
CTR3YLR411W NOP7P53261 605 aaKnown RBP7.14□□□□□ -1.27
CTR3YLR411W VPS16Q03308 798 aa7.14□□□□□ -1.27
CTR3YLR411W PIN2Q12057 282 aa7.14□□□□□ -1.27
CTR3YLR411W SNQ2P32568 1501 aaKnown RBP7.13□□□□□ -1.27
CTR3YLR411W STH1P32597 1359 aa7.13□□□□□ -1.27
CTR3YLR411W CHS2P14180 963 aa7.13□□□□□ -1.27
CTR3YLR411W RET1P22276 1149 aaKnown RBP7.13□□□□□ -1.27
CTR3YLR411W RAD27P26793 382 aa7.13□□□□□ -1.27
CTR3YLR411W MKK2P32491 506 aa7.13□□□□□ -1.27
CTR3YLR411W MAD1P40957 749 aa7.13□□□□□ -1.27
CTR3YLR411W MMM1P41800 426 aa7.13□□□□□ -1.27
CTR3YLR411W RSA3Q05942 220 aaKnown RBP7.13□□□□□ -1.27
CTR3YLR411W TMA46Q12000 345 aaKnown RBP7.13□□□□□ -1.27
CTR3YLR411W CLN2P20438 545 aa7.12□□□□□ -1.27
CTR3YLR411W MET10P39692 1035 aa7.12□□□□□ -1.27
CTR3YLR411W VPS53P47061 822 aa7.12□□□□□ -1.27
CTR3YLR411W RAT1Q02792 1006 aaKnown RBP7.12□□□□□ -1.27
CTR3YLR411W EAR1Q03212 550 aa7.12□□□□□ -1.27
CTR3YLR411W YLR257WQ06146 321 aaKnown RBP7.12□□□□□ -1.27
CTR3YLR411W YCF1P39109 1515 aaKnown RBP7.11□□□□□ -1.27
CTR3YLR411W MSB1P21339 1137 aaKnown RBP7.11□□□□□ -1.27
CTR3YLR411W WHI3P34761 661 aaKnown RBP7.11□□□□□ -1.27
CTR3YLR411W RER2P35196 286 aa7.11□□□□□ -1.27
CTR3YLR411W QNS1P38795 714 aaKnown RBP7.11□□□□□ -1.27
CTR3YLR411W MDS3P53094 1487 aa7.11□□□□□ -1.27
CTR3YLR411W ALG3P38179 458 aa7.1□□□□□ -1.27
CTR3YLR411W CIT3P43635 486 aa7.1□□□□□ -1.27
CTR3YLR411W EEB1Q02891 456 aa7.1□□□□□ -1.27
CTR3YLR411W PUS7Q08647 676 aaKnown RBP7.1□□□□□ -1.27
CTR3YLR411W PTC5Q12511 572 aa7.1□□□□□ -1.27
CTR3YLR411W SYP1P25623 870 aaKnown RBP7.09□□□□□ -1.27
CTR3YLR411W YGR130CP53278 816 aa7.09□□□□□ -1.27
CTR3YLR411W TPP1Q03796 238 aa7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms