RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	SPN1	Q06505	410 aa	Predicted RBP	5.22	□□□□□ -1.57
CLF1	YLR117C	VAM6	Q07468	1049 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	BCK1	Q01389	1478 aa		5.22	□□□□□ -1.57
CLF1	YLR117C	CPA2	P03965	1118 aa	Known RBP	5.21	□□□□□ -1.58
CLF1	YLR117C	ADE3	P07245	946 aa	Known RBP	5.21	□□□□□ -1.58
CLF1	YLR117C	PET122	P10355	254 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	NPL6	P32832	435 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	RIB7	P33312	244 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	SEG2	P34250	1132 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	NOC2	P39744	710 aa	Known RBP	5.21	□□□□□ -1.58
CLF1	YLR117C	BUD16	P39988	312 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	AIM9	P40053	627 aa	Known RBP	5.21	□□□□□ -1.58
CLF1	YLR117C	PXA1	P41909	870 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	SET2	P46995	733 aa	Known RBP	5.21	□□□□□ -1.58
CLF1	YLR117C	CTF18	P49956	741 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	ALF1	P53904	254 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	YPR097W	Q06839	1073 aa		5.21	□□□□□ -1.58
CLF1	YLR117C	BUD2	P33314	1104 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	PSY4	P38193	441 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	TDA11	P38854	504 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	INA22	P40576	216 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	MDJ2	P42834	146 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	DAS1	P47005	663 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	SFB2	P53953	876 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	YPL109C	Q02981	657 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	CSI1	Q04368	295 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	MRD1	Q06106	887 aa	Known RBP	5.2	□□□□□ -1.58
CLF1	YLR117C	SLK19	Q08581	821 aa	Known RBP	5.2	□□□□□ -1.58
CLF1	YLR117C	TMA16	Q08687	178 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	OCA6	Q12454	224 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	PPX1	P38698	397 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	YLF2	P38746	405 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	REV7	P38927	245 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	CCC2	P38995	1004 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	AIM21	P40563	679 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	MAD1	P40957	749 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	PCL10	P53124	433 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	BNI4	P53858	892 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	BOP3	P53958	396 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	YLR271W	Q06152	274 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	DNL4	Q08387	944 aa	Predicted RBP	5.2	□□□□□ -1.58
CLF1	YLR117C	YOR296W	Q08748	1289 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	BUD7	Q08754	746 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	WHI5	Q12416	295 aa		5.2	□□□□□ -1.58
CLF1	YLR117C	BRR1	Q99177	341 aa	Predicted RBP	5.2	□□□□□ -1.58
CLF1	YLR117C	RAD53	P22216	821 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	VAN1	P23642	535 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	ATO2	P32907	282 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	NPL4	P33755	580 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	KDX1	P36005	433 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	ARB1	P40024	610 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	SCS2	P40075	244 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	YAP5	P40574	245 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	FMS1	P50264	508 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	LSG1	P53145	640 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	YKR005C	Q02203	525 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	YML108W	Q03759	105 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	MSH6	Q03834	1242 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	YMR111C	Q04461	462 aa	Predicted RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	MGR3	Q04472	501 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	VPS38	Q05919	439 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	SPP382	Q06411	708 aa	Predicted RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	NOP6	Q07623	225 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	NUR1	Q12066	484 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	CLF1	Q12309	687 aa	Predicted RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	ADH4	P10127	382 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	PHO13	P19881	312 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	UGA3	P26370	528 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	ETP1	P38748	585 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	ERP6	P53198	216 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	SDA1	P53313	767 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	TRS120	Q04183	1289 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	YDR341C	Q05506	607 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	MAG2	Q06436	670 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	TSR2	Q06672	205 aa	Known RBP	5.19	□□□□□ -1.58
CLF1	YLR117C	YPL150W	Q12152	901 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	APC2	Q12440	853 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	YOL098C	Q12496	1037 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	YBL029C-A	Q3E756	94 aa		5.19	□□□□□ -1.58
CLF1	YLR117C	PDC1	P06169	563 aa	Known RBP	5.18	□□□□□ -1.58
CLF1	YLR117C	CNS1	P33313	385 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	HSM3	P38348	480 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	SSZ1	P38788	538 aa	Known RBP	5.18	□□□□□ -1.58
CLF1	YLR117C	KAP123	P40069	1113 aa	Known RBP	5.18	□□□□□ -1.58
CLF1	YLR117C	AXL1	P40851	1208 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	RPA14	P50106	137 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	GTR1	Q00582	310 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
CLF1	YLR117C	SYH1	Q02875	849 aa	Known RBP	5.18	□□□□□ -1.58
CLF1	YLR117C	TAF8	Q03750	510 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	SPC24	Q04477	213 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	ERB1	Q04660	807 aa	Known RBP	5.18	□□□□□ -1.58
CLF1	YLR117C	SGT2	Q12118	346 aa	Known RBP	5.18	□□□□□ -1.58
CLF1	YLR117C	IES3	Q12345	250 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	RMP1	Q12530	201 aa		5.18	□□□□□ -1.58
CLF1	YLR117C	TPM1	P17536	199 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	ASF1	P32447	279 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	KES1	P35844	434 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	PXL1	P36166	706 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	MAL33	P38157	468 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms