RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W ISA1Q07821 250 aaPredicted RBP6.4□□□□□ -1.38
LDB18YLL049W YPL260WQ08977 551 aa6.4□□□□□ -1.38
LDB18YLL049W MAK21Q12176 1025 aaKnown RBP6.4□□□□□ -1.38
LDB18YLL049W YDR461C-AQ2V2P7 80 aa6.4□□□□□ -1.38
LDB18YLL049W FKS1P38631 1876 aaKnown RBP6.39□□□□□ -1.39
LDB18YLL049W RPS19AP07280 144 aaKnown RBP6.39□□□□□ -1.39
LDB18YLL049W RPS19BP07281 144 aaPredicted RBP6.39□□□□□ -1.39
LDB18YLL049W CUP1-1P0CX80 61 aa6.39□□□□□ -1.39
LDB18YLL049W CUP1-2P0CX81 61 aa6.39□□□□□ -1.39
LDB18YLL049W MCM4P30665 933 aaKnown RBP6.39□□□□□ -1.39
LDB18YLL049W SGM1P47166 707 aa6.39□□□□□ -1.39
LDB18YLL049W CSI1Q04368 295 aa6.39□□□□□ -1.39
LDB18YLL049W EMI2Q04409 500 aaKnown RBP6.39□□□□□ -1.39
LDB18YLL049W YMR321CQ04898 105 aa6.39□□□□□ -1.39
LDB18YLL049W YDL144CQ07589 356 aa6.39□□□□□ -1.39
LDB18YLL049W RAD59Q12223 238 aa6.39□□□□□ -1.39
LDB18YLL049W ERP3Q12403 225 aa6.39□□□□□ -1.39
LDB18YLL049W TRM11Q12463 433 aa6.39□□□□□ -1.39
LDB18YLL049W SEN1Q00416 2231 aaKnown RBP6.39□□□□□ -1.39
LDB18YLL049W SAM1P10659 382 aaKnown RBP6.38□□□□□ -1.39
LDB18YLL049W IDI1P15496 288 aa6.38□□□□□ -1.39
LDB18YLL049W URK1P27515 501 aa6.38□□□□□ -1.39
LDB18YLL049W SHP1P34223 423 aa6.38□□□□□ -1.39
LDB18YLL049W PHO88P38264 188 aaPredicted RBP6.38□□□□□ -1.39
LDB18YLL049W PRE3P38624 215 aa6.38□□□□□ -1.39
LDB18YLL049W FMP10P40098 244 aa6.38□□□□□ -1.39
LDB18YLL049W VPS72Q03388 795 aa6.38□□□□□ -1.39
LDB18YLL049W TMA64Q04600 565 aaKnown RBP6.38□□□□□ -1.39
LDB18YLL049W CSC1Q06538 782 aa6.38□□□□□ -1.39
LDB18YLL049W COX6P00427 148 aa6.37□□□□□ -1.39
LDB18YLL049W SWI6P09959 803 aa6.37□□□□□ -1.39
LDB18YLL049W POL3P15436 1097 aa6.37□□□□□ -1.39
LDB18YLL049W CHS3P29465 1165 aa6.37□□□□□ -1.39
LDB18YLL049W TFC4P33339 1025 aa6.37□□□□□ -1.39
LDB18YLL049W GEF1P37020 779 aa6.37□□□□□ -1.39
LDB18YLL049W PTC4P38089 393 aa6.37□□□□□ -1.39
LDB18YLL049W GUA1P38625 525 aaKnown RBP6.37□□□□□ -1.39
LDB18YLL049W SSF1P38789 453 aaPredicted RBP6.37□□□□□ -1.39
LDB18YLL049W YEL023CP39992 682 aa6.37□□□□□ -1.39
LDB18YLL049W POL32P47110 350 aa6.37□□□□□ -1.39
LDB18YLL049W AZR1P50080 613 aa6.37□□□□□ -1.39
LDB18YLL049W SPH1Q06160 661 aa6.37□□□□□ -1.39
LDB18YLL049W SPT2P06843 333 aaPredicted RBP6.36□□□□□ -1.39
LDB18YLL049W SAM2P19358 384 aaKnown RBP6.36□□□□□ -1.39
LDB18YLL049W DUR3P33413 735 aa6.36□□□□□ -1.39
LDB18YLL049W STB5P38699 743 aa6.36□□□□□ -1.39
LDB18YLL049W TVP23P38962 199 aa6.36□□□□□ -1.39
LDB18YLL049W YGR035CP53222 116 aa6.36□□□□□ -1.39
LDB18YLL049W DUS3Q06053 668 aaKnown RBP6.36□□□□□ -1.39
LDB18YLL049W SNA3P14359 133 aa6.35□□□□□ -1.39
LDB18YLL049W TKL1P23254 680 aaKnown RBP6.35□□□□□ -1.39
LDB18YLL049W MCR1P36060 302 aaKnown RBP6.35□□□□□ -1.39
LDB18YLL049W FLR1P38124 548 aa6.35□□□□□ -1.39
LDB18YLL049W ATF2P53296 535 aa6.35□□□□□ -1.39
LDB18YLL049W SYN8P31377 255 aa6.34□□□□□ -1.39
LDB18YLL049W SEC8P32855 1065 aa6.34□□□□□ -1.39
LDB18YLL049W PTC3P34221 468 aaKnown RBP6.34□□□□□ -1.39
LDB18YLL049W IOC3P43596 787 aa6.34□□□□□ -1.39
LDB18YLL049W MET13P53128 600 aa6.34□□□□□ -1.39
LDB18YLL049W KTR3P38130 404 aaPredicted RBP6.33□□□□□ -1.4
LDB18YLL049W REG2P38232 338 aa6.33□□□□□ -1.4
LDB18YLL049W YHL050CP38721 697 aa6.33□□□□□ -1.4
LDB18YLL049W HUL4P40985 892 aa6.33□□□□□ -1.4
LDB18YLL049W SPO74P45819 413 aa6.33□□□□□ -1.4
LDB18YLL049W CAN1P04817 590 aa6.32□□□□□ -1.4
LDB18YLL049W MAS2P11914 482 aa6.32□□□□□ -1.4
LDB18YLL049W DAL5P15365 543 aa6.32□□□□□ -1.4
LDB18YLL049W ALD5P40047 520 aaKnown RBP6.32□□□□□ -1.4
LDB18YLL049W INP51P40559 946 aaKnown RBP6.32□□□□□ -1.4
LDB18YLL049W HEH2Q03281 663 aa6.32□□□□□ -1.4
LDB18YLL049W MSC2Q03455 724 aa6.32□□□□□ -1.4
LDB18YLL049W ECM16Q04217 1267 aaKnown RBP6.32□□□□□ -1.4
LDB18YLL049W GUD1Q07729 489 aa6.32□□□□□ -1.4
LDB18YLL049W ATG11Q12527 1178 aa6.32□□□□□ -1.4
LDB18YLL049W PPZ1P26570 692 aa6.31□□□□□ -1.4
LDB18YLL049W RTS1P38903 757 aa6.31□□□□□ -1.4
LDB18YLL049W VID27P40157 782 aa6.31□□□□□ -1.4
LDB18YLL049W KAR5Q04746 504 aa6.31□□□□□ -1.4
LDB18YLL049W RAD61Q99359 647 aa6.31□□□□□ -1.4
LDB18YLL049W KEX2P13134 814 aa6.3□□□□□ -1.4
LDB18YLL049W GCD7P32502 381 aaPredicted RBP6.3□□□□□ -1.4
LDB18YLL049W IRC8P47046 822 aa6.3□□□□□ -1.4
LDB18YLL049W SKY1Q03656 742 aa6.3□□□□□ -1.4
LDB18YLL049W YDR344CQ05510 147 aa6.3□□□□□ -1.4
LDB18YLL049W CCH1P50077 2039 aa6.3□□□□□ -1.4
LDB18YLL049W RPL40AP0CH08 128 aaKnown RBP6.29□□□□□ -1.4
LDB18YLL049W RPL40BP0CH09 128 aaKnown RBP6.29□□□□□ -1.4
LDB18YLL049W SUI2P20459 304 aaKnown RBP6.29□□□□□ -1.4
LDB18YLL049W KTR4P38131 464 aa6.29□□□□□ -1.4
LDB18YLL049W YTA12P40341 825 aa6.29□□□□□ -1.4
LDB18YLL049W OPT1P40897 799 aa6.29□□□□□ -1.4
LDB18YLL049W YML020WQ03722 664 aa6.29□□□□□ -1.4
LDB18YLL049W IRC10Q08118 586 aa6.29□□□□□ -1.4
LDB18YLL049W RIF1P29539 1916 aa6.29□□□□□ -1.4
LDB18YLL049W FMP27Q06179 2628 aa6.29□□□□□ -1.4
LDB18YLL049W ACE2P21192 770 aa6.28□□□□□ -1.4
LDB18YLL049W FUB1P25659 250 aa6.28□□□□□ -1.4
LDB18YLL049W CTR1P49573 406 aa6.28□□□□□ -1.4
LDB18YLL049W YGL242CP53066 181 aa6.28□□□□□ -1.4
LDB18YLL049W LCD1Q04377 747 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms