RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	SWI4	P25302	1093 aa	Known RBP	11.7	□□□□□ -0.54
SHB17	YKR043C	RXT2	P38255	430 aa		11.7	□□□□□ -0.54
SHB17	YKR043C	PRY3	P47033	881 aa		11.7	□□□□□ -0.54
SHB17	YKR043C	LIF1	P53150	421 aa		11.7	□□□□□ -0.54
SHB17	YKR043C	SLD5	Q03406	294 aa		11.7	□□□□□ -0.54
SHB17	YKR043C	RKM4	Q12504	494 aa		11.7	□□□□□ -0.54
SHB17	YKR043C	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
SHB17	YKR043C	HCA4	P20448	770 aa	Known RBP	11.69	□□□□□ -0.54
SHB17	YKR043C	UGA4	P32837	571 aa		11.69	□□□□□ -0.54
SHB17	YKR043C	OPY1	P38271	328 aa		11.69	□□□□□ -0.54
SHB17	YKR043C	PCI8	P40512	444 aa		11.69	□□□□□ -0.54
SHB17	YKR043C	VPS62	P53285	467 aa		11.69	□□□□□ -0.54
SHB17	YKR043C	BRE5	P53741	515 aa	Known RBP	11.69	□□□□□ -0.54
SHB17	YKR043C	YLR407W	Q06070	228 aa		11.69	□□□□□ -0.54
SHB17	YKR043C	PAN5	P38787	379 aa		11.68	□□□□□ -0.54
SHB17	YKR043C	RPN10	P38886	268 aa	Known RBP	11.68	□□□□□ -0.54
SHB17	YKR043C	CCT3	P39077	534 aa	Known RBP	11.68	□□□□□ -0.54
SHB17	YKR043C	GDE1	Q02979	1223 aa		11.68	□□□□□ -0.54
SHB17	YKR043C	TKL1	P23254	680 aa	Known RBP	11.67	□□□□□ -0.54
SHB17	YKR043C	PWP2	P25635	923 aa	Known RBP	11.67	□□□□□ -0.54
SHB17	YKR043C	YHL017W	P38745	532 aa		11.67	□□□□□ -0.54
SHB17	YKR043C	CTR1	P49573	406 aa		11.67	□□□□□ -0.54
SHB17	YKR043C	YGL039W	P53183	348 aa	Known RBP	11.67	□□□□□ -0.54
SHB17	YKR043C	YLR326W	Q06170	240 aa	Known RBP	11.67	□□□□□ -0.54
SHB17	YKR043C	ISA1	Q07821	250 aa	Predicted RBP	11.67	□□□□□ -0.54
SHB17	YKR043C	MSC6	Q08818	692 aa	Known RBP	11.67	□□□□□ -0.54
SHB17	YKR043C	SUT2	Q12286	268 aa		11.67	□□□□□ -0.54
SHB17	YKR043C	YOR131C	Q12486	218 aa		11.67	□□□□□ -0.54
SHB17	YKR043C	MAK11	P20484	414 aa	Known RBP	11.66	□□□□□ -0.54
SHB17	YKR043C	YUR1	P26725	428 aa		11.66	□□□□□ -0.54
SHB17	YKR043C	BCS1	P32839	456 aa		11.66	□□□□□ -0.54
SHB17	YKR043C	DBP7	P36120	742 aa	Known RBP	11.66	□□□□□ -0.54
SHB17	YKR043C	CTF18	P49956	741 aa		11.66	□□□□□ -0.54
SHB17	YKR043C	RLF2	Q12495	606 aa		11.66	□□□□□ -0.54
SHB17	YKR043C	REG2	P38232	338 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	AFG3	P39925	761 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	SCS3	P53012	380 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	YGL138C	P53122	345 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	PTA1	Q01329	785 aa	Predicted RBP	11.65	□□□□□ -0.54
SHB17	YKR043C	GIS4	Q04233	774 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	YMR321C	Q04898	105 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	OXR1	Q08952	273 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	YDR461C-A	Q2V2P7	80 aa		11.65	□□□□□ -0.54
SHB17	YKR043C	TY1B-A	O13527	1196 aa	Known RBP	11.64	□□□□□ -0.55
SHB17	YKR043C	CBP3	P21560	335 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	MCM4	P30665	933 aa	Known RBP	11.64	□□□□□ -0.55
SHB17	YKR043C	SEC8	P32855	1065 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	TFC4	P33339	1025 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	LDH1	P38139	375 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	SUL1	P38359	859 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	AIM21	P40563	679 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	YIR014W	P40570	242 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	YJR107W	P47145	328 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	PSK2	Q08217	1101 aa		11.64	□□□□□ -0.55
SHB17	YKR043C	MAC1	P35192	417 aa		11.63	□□□□□ -0.55
SHB17	YKR043C	BUD6	P41697	788 aa		11.63	□□□□□ -0.55
SHB17	YKR043C	VPS53	P47061	822 aa		11.63	□□□□□ -0.55
SHB17	YKR043C	ENT3	P47160	408 aa		11.63	□□□□□ -0.55
SHB17	YKR043C	SMD2	Q06217	110 aa	Known RBP	11.63	□□□□□ -0.55
SHB17	YKR043C	MDM20	Q12387	796 aa	Known RBP	11.63	□□□□□ -0.55
SHB17	YKR043C	ECM29	P38737	1868 aa		11.63	□□□□□ -0.55
SHB17	YKR043C	CDC6	P09119	513 aa		11.62	□□□□□ -0.55
SHB17	YKR043C	RPL19A	P0CX82	189 aa	Known RBP	11.62	□□□□□ -0.55
SHB17	YKR043C	RPL19B	P0CX83	189 aa	Predicted RBP	11.62	□□□□□ -0.55
SHB17	YKR043C	VPS1	P21576	704 aa	Known RBP	11.62	□□□□□ -0.55
SHB17	YKR043C	DBP1	P24784	617 aa	Known RBP	11.62	□□□□□ -0.55
SHB17	YKR043C	NAF1	P53919	492 aa	Known RBP	11.62	□□□□□ -0.55
SHB17	YKR043C	TRM11	Q12463	433 aa		11.62	□□□□□ -0.55
SHB17	YKR043C	ARP6	Q12509	438 aa		11.62	□□□□□ -0.55
SHB17	YKR043C	POX1	P13711	748 aa		11.61	□□□□□ -0.55
SHB17	YKR043C	SAS3	P34218	831 aa		11.61	□□□□□ -0.55
SHB17	YKR043C	KSP1	P38691	1029 aa	Known RBP	11.61	□□□□□ -0.55
SHB17	YKR043C	BNI5	P53890	448 aa	Known RBP	11.61	□□□□□ -0.55
SHB17	YKR043C	WHI4	Q07655	649 aa	Known RBP	11.61	□□□□□ -0.55
SHB17	YKR043C	CEX1	Q12453	761 aa		11.61	□□□□□ -0.55
SHB17	YKR043C	PDC1	P06169	563 aa	Known RBP	11.6	□□□□□ -0.55
SHB17	YKR043C	SES1	P07284	462 aa	Known RBP	11.6	□□□□□ -0.55
SHB17	YKR043C	TIM23	P32897	222 aa		11.6	□□□□□ -0.55
SHB17	YKR043C	UIP5	P36137	443 aa		11.6	□□□□□ -0.55
SHB17	YKR043C	VPS20	Q04272	221 aa		11.6	□□□□□ -0.55
SHB17	YKR043C	ELG1	Q12050	791 aa		11.6	□□□□□ -0.55
SHB17	YKR043C	MAM3	Q12296	706 aa		11.6	□□□□□ -0.55
SHB17	YKR043C	SRO9	P25567	434 aa	Known RBP	11.59	□□□□□ -0.55
SHB17	YKR043C	NOC2	P39744	710 aa	Known RBP	11.59	□□□□□ -0.55
SHB17	YKR043C	YGR273C	P53329	174 aa		11.59	□□□□□ -0.55
SHB17	YKR043C	RET3	P53600	189 aa		11.59	□□□□□ -0.55
SHB17	YKR043C	ORC4	P54791	529 aa		11.59	□□□□□ -0.55
SHB17	YKR043C	OYE2	Q03558	400 aa	Known RBP	11.59	□□□□□ -0.55
SHB17	YKR043C	HSP82	P02829	709 aa	Known RBP	11.58	□□□□□ -0.56
SHB17	YKR043C	CPA2	P03965	1118 aa	Known RBP	11.58	□□□□□ -0.56
SHB17	YKR043C	ASF1	P32447	279 aa		11.58	□□□□□ -0.56
SHB17	YKR043C	SKP2	P42843	763 aa		11.58	□□□□□ -0.56
SHB17	YKR043C	CIT3	P43635	486 aa		11.58	□□□□□ -0.56
SHB17	YKR043C	NPA3	P47122	385 aa		11.58	□□□□□ -0.56
SHB17	YKR043C	DSE4	P53753	1117 aa		11.58	□□□□□ -0.56
SHB17	YKR043C	AIM33	Q04516	312 aa		11.58	□□□□□ -0.56
SHB17	YKR043C	YPL150W	Q12152	901 aa		11.58	□□□□□ -0.56
SHB17	YKR043C	GET3	Q12154	354 aa	Known RBP	11.58	□□□□□ -0.56
SHB17	YKR043C	TTI1	P36097	1038 aa		11.57	□□□□□ -0.56
SHB17	YKR043C	ISW1	P38144	1129 aa		11.57	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms