RNA–Protein interactions for RNA: YKL150W

MCR1, Transcript of Mitochondrial NADH-cytochrome b5 reductase, yeast

Gene MCR1, Length 909 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCR1	YKL150W	DAL4	Q04895	635 aa		4.65	□□□□□ -1.67
MCR1	YKL150W	HRK1	Q08732	759 aa	Known RBP	4.65	□□□□□ -1.67
MCR1	YKL150W	RNQ1	P25367	405 aa		4.64	□□□□□ -1.67
MCR1	YKL150W	MET4	P32389	672 aa		4.64	□□□□□ -1.67
MCR1	YKL150W	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
MCR1	YKL150W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
MCR1	YKL150W	MDL2	P33311	773 aa		4.63	□□□□□ -1.67
MCR1	YKL150W	SLD2	P34252	453 aa		4.63	□□□□□ -1.67
MCR1	YKL150W	PTC7	P38797	343 aa		4.63	□□□□□ -1.67
MCR1	YKL150W	PEX28	P38848	579 aa		4.63	□□□□□ -1.67
MCR1	YKL150W	XKS1	P42826	600 aa		4.63	□□□□□ -1.67
MCR1	YKL150W	VPS53	P47061	822 aa		4.63	□□□□□ -1.67
MCR1	YKL150W	ADI1	Q03677	179 aa		4.63	□□□□□ -1.67
MCR1	YKL150W	TAF13	P11747	167 aa		4.62	□□□□□ -1.67
MCR1	YKL150W	GAS1	P22146	559 aa	Known RBP	4.62	□□□□□ -1.67
MCR1	YKL150W	ADD66	P36040	267 aa		4.62	□□□□□ -1.67
MCR1	YKL150W	THI12	P42883	340 aa		4.62	□□□□□ -1.67
MCR1	YKL150W	THI5	P43534	340 aa		4.62	□□□□□ -1.67
MCR1	YKL150W	THI11	P47183	340 aa		4.62	□□□□□ -1.67
MCR1	YKL150W	FOL2	P51601	243 aa	Known RBP	4.62	□□□□□ -1.67
MCR1	YKL150W	RSA3	Q05942	220 aa	Known RBP	4.62	□□□□□ -1.67
MCR1	YKL150W	THI13	Q07748	340 aa		4.62	□□□□□ -1.67
MCR1	YKL150W	LPX1	Q12405	387 aa	Known RBP	4.62	□□□□□ -1.67
MCR1	YKL150W	SRO9	P25567	434 aa	Known RBP	4.61	□□□□□ -1.67
MCR1	YKL150W	RDH54	P38086	958 aa		4.61	□□□□□ -1.67
MCR1	YKL150W	YHL012W	P38709	493 aa		4.61	□□□□□ -1.67
MCR1	YKL150W	SAM35	P14693	329 aa		4.6	□□□□□ -1.67
MCR1	YKL150W	TSA1	P34760	196 aa	Known RBP	4.6	□□□□□ -1.67
MCR1	YKL150W	QNS1	P38795	714 aa	Known RBP	4.6	□□□□□ -1.67
MCR1	YKL150W	GTS1	P40956	396 aa		4.6	□□□□□ -1.67
MCR1	YKL150W	YGL140C	P53120	1219 aa		4.6	□□□□□ -1.67
MCR1	YKL150W	YPL109C	Q02981	657 aa		4.6	□□□□□ -1.67
MCR1	YKL150W	HXK1	P04806	485 aa	Known RBP	4.59	□□□□□ -1.67
MCR1	YKL150W	UGA4	P32837	571 aa		4.59	□□□□□ -1.67
MCR1	YKL150W	ENV11	P53246	860 aa		4.59	□□□□□ -1.67
MCR1	YKL150W	YNR063W	P53749	607 aa		4.59	□□□□□ -1.67
MCR1	YKL150W	EST2	Q06163	884 aa		4.59	□□□□□ -1.67
MCR1	YKL150W	CDA2	Q06703	312 aa		4.59	□□□□□ -1.67
MCR1	YKL150W	NBA1	Q08229	501 aa	Known RBP	4.59	□□□□□ -1.67
MCR1	YKL150W	WHI5	Q12416	295 aa		4.59	□□□□□ -1.67
MCR1	YKL150W	SEC23	P15303	768 aa	Known RBP	4.58	□□□□□ -1.68
MCR1	YKL150W	RPT1	P33299	467 aa	Known RBP	4.58	□□□□□ -1.68
MCR1	YKL150W	MCD1	Q12158	566 aa		4.58	□□□□□ -1.68
MCR1	YKL150W	MRPS18	P42847	217 aa		4.57	□□□□□ -1.68
MCR1	YKL150W	MRPL22	P53881	309 aa		4.57	□□□□□ -1.68
MCR1	YKL150W	PRP6	P19735	899 aa	Predicted RBP	4.56	□□□□□ -1.68
MCR1	YKL150W	YSC84	P32793	468 aa		4.56	□□□□□ -1.68
MCR1	YKL150W	YJL045W	P47052	634 aa		4.56	□□□□□ -1.68
MCR1	YKL150W	ENT3	P47160	408 aa		4.56	□□□□□ -1.68
MCR1	YKL150W	YGR122W	P53272	402 aa		4.56	□□□□□ -1.68
MCR1	YKL150W	NMD3	P38861	518 aa	Known RBP	4.55	□□□□□ -1.68
MCR1	YKL150W	IPL1	P38991	367 aa		4.55	□□□□□ -1.68
MCR1	YKL150W	FAA3	P39002	694 aa		4.55	□□□□□ -1.68
MCR1	YKL150W	SNO2	P53823	222 aa		4.55	□□□□□ -1.68
MCR1	YKL150W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
MCR1	YKL150W	TOS4	Q06266	489 aa		4.55	□□□□□ -1.68
MCR1	YKL150W	RSC58	Q07979	502 aa		4.55	□□□□□ -1.68
MCR1	YKL150W	COQ4	O13525	335 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	HEM13	P11353	328 aa	Known RBP	4.54	□□□□□ -1.68
MCR1	YKL150W	PRE9	P23638	258 aa	Known RBP	4.54	□□□□□ -1.68
MCR1	YKL150W	YCR015C	P25616	317 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	AIM26	P32858	118 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	THI80	P35202	319 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	CCZ1	P38273	704 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	MGE1	P38523	228 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	RIM8	P53179	542 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	SEN54	Q02825	467 aa	Predicted RBP	4.54	□□□□□ -1.68
MCR1	YKL150W	HOS3	Q02959	697 aa	Known RBP	4.54	□□□□□ -1.68
MCR1	YKL150W	ESC8	Q08119	714 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	PTC5	Q12511	572 aa		4.54	□□□□□ -1.68
MCR1	YKL150W	SOD2	P00447	233 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	SPS1	P08458	490 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	KIP1	P28742	1111 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	BAP2	P38084	609 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	ETP1	P38748	585 aa	Known RBP	4.53	□□□□□ -1.68
MCR1	YKL150W	RPN3	P40016	523 aa	Known RBP	4.53	□□□□□ -1.68
MCR1	YKL150W	PIC2	P40035	300 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	HNT2	P49775	206 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	TNA1	P53322	534 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	YPL260W	Q08977	551 aa		4.53	□□□□□ -1.68
MCR1	YKL150W	YKL222C	P35995	705 aa		4.52	□□□□□ -1.69
MCR1	YKL150W	YDL177C	Q12257	170 aa		4.52	□□□□□ -1.69
MCR1	YKL150W	RAD2	P07276	1031 aa		4.51	□□□□□ -1.69
MCR1	YKL150W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
MCR1	YKL150W	AFG2	P32794	780 aa		4.51	□□□□□ -1.69
MCR1	YKL150W	AIM3	P38266	947 aa	Known RBP	4.51	□□□□□ -1.69
MCR1	YKL150W	PIK1	P39104	1066 aa		4.51	□□□□□ -1.69
MCR1	YKL150W	RSB1	Q08417	382 aa		4.51	□□□□□ -1.69
MCR1	YKL150W	YOR352W	Q08816	343 aa		4.51	□□□□□ -1.69
MCR1	YKL150W	CYC8	P14922	966 aa		4.5	□□□□□ -1.69
MCR1	YKL150W	ALG3	P38179	458 aa		4.5	□□□□□ -1.69
MCR1	YKL150W	SEC26	P41810	973 aa	Known RBP	4.5	□□□□□ -1.69
MCR1	YKL150W	SIW14	P53965	281 aa		4.5	□□□□□ -1.69
MCR1	YKL150W	HDA2	Q06629	674 aa		4.5	□□□□□ -1.69
MCR1	YKL150W	SEC8	P32855	1065 aa		4.49	□□□□□ -1.69
MCR1	YKL150W	RPS13	P05756	151 aa	Known RBP	4.48	□□□□□ -1.69
MCR1	YKL150W	DED1	P06634	604 aa	Known RBP	4.48	□□□□□ -1.69
MCR1	YKL150W	HEM3	P28789	327 aa		4.48	□□□□□ -1.69
MCR1	YKL150W	RGD1	P38339	666 aa		4.48	□□□□□ -1.69
MCR1	YKL150W	GIP4	P39732	760 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms