RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W EST2Q06163 884 aa6.64□□□□□ -1.35
PTM1YKL039W PET112P33893 541 aa6.63□□□□□ -1.35
PTM1YKL039W HXT13P39924 564 aa6.63□□□□□ -1.35
PTM1YKL039W ALT1P52893 592 aa6.63□□□□□ -1.35
PTM1YKL039W HXT17P53631 564 aa6.63□□□□□ -1.35
PTM1YKL039W HXT15P54854 567 aa6.63□□□□□ -1.35
PTM1YKL039W SVF1Q05515 481 aa6.63□□□□□ -1.35
PTM1YKL039W AFG2P32794 780 aa6.62□□□□□ -1.35
PTM1YKL039W SMY2P32909 740 aaKnown RBP6.62□□□□□ -1.35
PTM1YKL039W DUT1P33317 147 aa6.61□□□□□ -1.35
PTM1YKL039W ENT3P47160 408 aa6.61□□□□□ -1.35
PTM1YKL039W ROD1Q02805 837 aa6.61□□□□□ -1.35
PTM1YKL039W DED1P06634 604 aaKnown RBP6.61□□□□□ -1.35
PTM1YKL039W NNK1P36003 928 aa6.61□□□□□ -1.35
PTM1YKL039W KAE1P36132 386 aa6.61□□□□□ -1.35
PTM1YKL039W ATG14P38270 344 aa6.61□□□□□ -1.35
PTM1YKL039W YNR063WP53749 607 aa6.61□□□□□ -1.35
PTM1YKL039W TCB3Q03640 1545 aaKnown RBP6.6□□□□□ -1.35
PTM1YKL039W RPS4AP0CX35 261 aaKnown RBP6.6□□□□□ -1.35
PTM1YKL039W RPS4BP0CX36 261 aaKnown RBP6.6□□□□□ -1.35
PTM1YKL039W CHS2P14180 963 aa6.6□□□□□ -1.35
PTM1YKL039W NFS1P25374 497 aa6.6□□□□□ -1.35
PTM1YKL039W WHI3P34761 661 aaKnown RBP6.6□□□□□ -1.35
PTM1YKL039W MNR2P35724 969 aa6.6□□□□□ -1.35
PTM1YKL039W EAR1Q03212 550 aa6.6□□□□□ -1.35
PTM1YKL039W RSA3Q05942 220 aaKnown RBP6.6□□□□□ -1.35
PTM1YKL039W RTT10Q08924 1013 aa6.6□□□□□ -1.35
PTM1YKL039W TY1B-DR4Q07793 1604 aa6.59□□□□□ -1.35
PTM1YKL039W CDC34P14682 295 aa6.59□□□□□ -1.35
PTM1YKL039W HSE1P38753 452 aa6.59□□□□□ -1.35
PTM1YKL039W MMM1P41800 426 aa6.59□□□□□ -1.35
PTM1YKL039W LAP2Q10740 671 aa6.59□□□□□ -1.35
PTM1YKL039W MSB1P21339 1137 aaKnown RBP6.58□□□□□ -1.36
PTM1YKL039W MKK2P32491 506 aa6.58□□□□□ -1.36
PTM1YKL039W RAT1Q02792 1006 aaKnown RBP6.58□□□□□ -1.36
PTM1YKL039W YLR257WQ06146 321 aaKnown RBP6.58□□□□□ -1.36
PTM1YKL039W JIP5Q06214 492 aaPredicted RBP6.58□□□□□ -1.36
PTM1YKL039W RET1P22276 1149 aaKnown RBP6.57□□□□□ -1.36
PTM1YKL039W YGR130CP53278 816 aa6.57□□□□□ -1.36
PTM1YKL039W TRP3P00937 484 aa6.57□□□□□ -1.36
PTM1YKL039W NAP1P25293 417 aaKnown RBP6.57□□□□□ -1.36
PTM1YKL039W YKR073CP36153 106 aa6.57□□□□□ -1.36
PTM1YKL039W MET10P39692 1035 aa6.57□□□□□ -1.36
PTM1YKL039W CIT3P43635 486 aa6.57□□□□□ -1.36
PTM1YKL039W VPS16Q03308 798 aa6.57□□□□□ -1.36
PTM1YKL039W PUS7Q08647 676 aaKnown RBP6.57□□□□□ -1.36
PTM1YKL039W ALG3P38179 458 aa6.56□□□□□ -1.36
PTM1YKL039W QNS1P38795 714 aaKnown RBP6.56□□□□□ -1.36
PTM1YKL039W VPS53P47061 822 aa6.56□□□□□ -1.36
PTM1YKL039W PIN2Q12057 282 aa6.56□□□□□ -1.36
PTM1YKL039W EEB1Q02891 456 aa6.55□□□□□ -1.36
PTM1YKL039W TPP1Q03796 238 aa6.55□□□□□ -1.36
PTM1YKL039W TMA46Q12000 345 aaKnown RBP6.55□□□□□ -1.36
PTM1YKL039W YVC1Q12324 675 aa6.55□□□□□ -1.36
PTM1YKL039W CLN2P20438 545 aa6.54□□□□□ -1.36
PTM1YKL039W RAD27P26793 382 aa6.54□□□□□ -1.36
PTM1YKL039W RER2P35196 286 aa6.54□□□□□ -1.36
PTM1YKL039W NMD3P38861 518 aaKnown RBP6.54□□□□□ -1.36
PTM1YKL039W HRK1Q08732 759 aaKnown RBP6.54□□□□□ -1.36
PTM1YKL039W PTC5Q12511 572 aa6.54□□□□□ -1.36
PTM1YKL039W SBP1P10080 294 aaKnown RBP6.53□□□□□ -1.36
PTM1YKL039W SYP1P25623 870 aaKnown RBP6.53□□□□□ -1.36
PTM1YKL039W MAD1P40957 749 aa6.53□□□□□ -1.36
PTM1YKL039W OYE3P41816 400 aaPredicted RBP6.53□□□□□ -1.36
PTM1YKL039W YJL045WP47052 634 aa6.53□□□□□ -1.36
PTM1YKL039W FAA4P47912 694 aaKnown RBP6.53□□□□□ -1.36
PTM1YKL039W RCM1P53972 490 aa6.53□□□□□ -1.36
PTM1YKL039W MED7Q08278 222 aa6.53□□□□□ -1.36
PTM1YKL039W YOR059CQ08448 450 aaKnown RBP6.53□□□□□ -1.36
PTM1YKL039W CYC7P00045 113 aa6.52□□□□□ -1.36
PTM1YKL039W DBP5P20449 482 aaKnown RBP6.52□□□□□ -1.36
PTM1YKL039W TOS1P38288 455 aa6.52□□□□□ -1.36
PTM1YKL039W ALO1P54783 526 aaKnown RBP6.52□□□□□ -1.36
PTM1YKL039W GCD1P09032 578 aaPredicted RBP6.52□□□□□ -1.37
PTM1YKL039W CNN1P43618 361 aa6.52□□□□□ -1.37
PTM1YKL039W MAG2Q06436 670 aaKnown RBP6.52□□□□□ -1.37
PTM1YKL039W TRP2P00899 507 aaKnown RBP6.51□□□□□ -1.37
PTM1YKL039W NOP7P53261 605 aaKnown RBP6.51□□□□□ -1.37
PTM1YKL039W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
PTM1YKL039W KIP1P28742 1111 aa6.5□□□□□ -1.37
PTM1YKL039W LYP1P32487 611 aa6.5□□□□□ -1.37
PTM1YKL039W YGR053CP53234 283 aa6.5□□□□□ -1.37
PTM1YKL039W TIF35Q04067 274 aaKnown RBP6.5□□□□□ -1.37
PTM1YKL039W AOS1Q06624 347 aa6.5□□□□□ -1.37
PTM1YKL039W RGD1P38339 666 aa6.49□□□□□ -1.37
PTM1YKL039W GPB2P39717 880 aa6.49□□□□□ -1.37
PTM1YKL039W GDE1Q02979 1223 aa6.49□□□□□ -1.37
PTM1YKL039W PEX7P39108 375 aa6.48□□□□□ -1.37
PTM1YKL039W MPH1P40562 993 aa6.48□□□□□ -1.37
PTM1YKL039W INP52P50942 1183 aa6.48□□□□□ -1.37
PTM1YKL039W ALD6P54115 500 aaKnown RBP6.48□□□□□ -1.37
PTM1YKL039W YPL260WQ08977 551 aa6.48□□□□□ -1.37
PTM1YKL039W SAM35P14693 329 aa6.48□□□□□ -1.37
PTM1YKL039W SDH1Q00711 640 aa6.48□□□□□ -1.37
PTM1YKL039W TRE1Q08919 783 aa6.48□□□□□ -1.37
PTM1YKL039W SPO21Q12411 609 aa6.48□□□□□ -1.37
PTM1YKL039W NSI1Q12457 570 aa6.48□□□□□ -1.37
PTM1YKL039W MLS1P30952 554 aa6.47□□□□□ -1.37
PTM1YKL039W YSC84P32793 468 aa6.47□□□□□ -1.37
PTM1YKL039W OMA1P36163 345 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms