RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	CDC53	Q12018	815 aa	Known RBP	4.46	□□□□□ -1.7
NDC80	YIL144W	YPL066W	Q12194	479 aa		4.46	□□□□□ -1.7
NDC80	YIL144W	DED1	P06634	604 aa	Known RBP	4.45	□□□□□ -1.7
NDC80	YIL144W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
NDC80	YIL144W	YKL077W	P36081	392 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	PGM2	P37012	569 aa	Known RBP	4.45	□□□□□ -1.7
NDC80	YIL144W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
NDC80	YIL144W	YFL066C	P43538	392 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	TIF35	Q04067	274 aa	Known RBP	4.45	□□□□□ -1.7
NDC80	YIL144W	TY4B-P	A0A0B7P3V8	1104 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	ERS1	P17261	260 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	MOT2	P34909	587 aa	Known RBP	4.45	□□□□□ -1.7
NDC80	YIL144W	SPC42	P36094	363 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	SHU2	P38957	223 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	EST2	Q06163	884 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	TY4A-H	Q6Q5P6	413 aa		4.45	□□□□□ -1.7
NDC80	YIL144W	LYP1	P32487	611 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	YBR184W	P38299	523 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	SPO74	P45819	413 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	PFD1	P46988	109 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	YRB30	P53107	440 aa	Predicted RBP	4.44	□□□□□ -1.7
NDC80	YIL144W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
NDC80	YIL144W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
NDC80	YIL144W	AGP1	P25376	633 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	ADD66	P36040	267 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	VBA5	P36172	582 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	LEM3	P42838	414 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	MEC3	Q02574	474 aa		4.44	□□□□□ -1.7
NDC80	YIL144W	ALG6	Q12001	544 aa	Known RBP	4.44	□□□□□ -1.7
NDC80	YIL144W	RAD27	P26793	382 aa		4.43	□□□□□ -1.7
NDC80	YIL144W	SPO71	Q03868	1245 aa		4.43	□□□□□ -1.7
NDC80	YIL144W	ALG14	P38242	237 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	ENT3	P47160	408 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	GCV1	P48015	400 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	SLP1	Q12232	587 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	AI1	P03875	834 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	SYP1	P25623	870 aa	Known RBP	4.42	□□□□□ -1.7
NDC80	YIL144W	NCE103	P53615	221 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	NAN1	Q02931	896 aa	Known RBP	4.42	□□□□□ -1.7
NDC80	YIL144W	SHE9	Q04172	456 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	AOS1	Q06624	347 aa		4.42	□□□□□ -1.7
NDC80	YIL144W	INO1	P11986	533 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	RPL8B	P29453	256 aa	Known RBP	4.41	□□□□□ -1.7
NDC80	YIL144W	ARL1	P38116	183 aa	Known RBP	4.41	□□□□□ -1.7
NDC80	YIL144W	REI1	P38344	393 aa	Predicted RBP	4.41	□□□□□ -1.7
NDC80	YIL144W	NMD2	P38798	1089 aa	Known RBP	4.41	□□□□□ -1.7
NDC80	YIL144W	MPH1	P40562	993 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	TIM54	P47045	478 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	YNR063W	P53749	607 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	DOS2	P54858	310 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	FLC1	Q08967	793 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	ELG1	Q12050	791 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	ALG12	P53730	551 aa		4.41	□□□□□ -1.7
NDC80	YIL144W	DBP5	P20449	482 aa	Known RBP	4.4	□□□□□ -1.71
NDC80	YIL144W	SBA1	P28707	216 aa	Known RBP	4.4	□□□□□ -1.71
NDC80	YIL144W	TIM23	P32897	222 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	BRN1	P38170	754 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	ALG3	P38179	458 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	MBP1	P39678	833 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	RSP5	P39940	809 aa	Known RBP	4.4	□□□□□ -1.71
NDC80	YIL144W	MTR4	P47047	1073 aa	Known RBP	4.4	□□□□□ -1.71
NDC80	YIL144W	YGR045C	P53229	120 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	RKM2	Q03942	479 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	FMP25	Q08023	583 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	YPR053C	Q6Q5F3	151 aa		4.4	□□□□□ -1.71
NDC80	YIL144W	SIP5	P40210	489 aa	Known RBP	4.39	□□□□□ -1.71
NDC80	YIL144W	CNN1	P43618	361 aa		4.39	□□□□□ -1.71
NDC80	YIL144W	YGL176C	P46945	554 aa		4.39	□□□□□ -1.71
NDC80	YIL144W	ATG36	P46983	293 aa		4.39	□□□□□ -1.71
NDC80	YIL144W	KIP3	P53086	805 aa	Known RBP	4.39	□□□□□ -1.71
NDC80	YIL144W	SPO20	Q04359	397 aa		4.39	□□□□□ -1.71
NDC80	YIL144W	NHA1	Q99271	985 aa		4.39	□□□□□ -1.71
NDC80	YIL144W	IRR1	P40541	1150 aa		4.39	□□□□□ -1.71
NDC80	YIL144W	ERR1	P0CX10	437 aa		4.38	□□□□□ -1.71
NDC80	YIL144W	ERR2	P0CX11	437 aa		4.38	□□□□□ -1.71
NDC80	YIL144W	SAC7	P17121	654 aa		4.38	□□□□□ -1.71
NDC80	YIL144W	MLS1	P30952	554 aa		4.38	□□□□□ -1.71
NDC80	YIL144W	PPG1	P32838	368 aa		4.38	□□□□□ -1.71
NDC80	YIL144W	SBE2	P42223	864 aa	Known RBP	4.38	□□□□□ -1.71
NDC80	YIL144W	TY1A-NL1	Q12391	440 aa	Known RBP	4.38	□□□□□ -1.71
NDC80	YIL144W	YAR028W	P39548	234 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	NUP82	P40368	713 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	YGR125W	P53273	1036 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	GAS5	Q08193	484 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	CAN1	P04817	590 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	DBP2	P24783	546 aa	Known RBP	4.37	□□□□□ -1.71
NDC80	YIL144W	MRP8	P35719	219 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	MAE1	P36013	669 aa	Known RBP	4.37	□□□□□ -1.71
NDC80	YIL144W	RRM3	P38766	723 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	ELA1	P53861	379 aa	Predicted RBP	4.37	□□□□□ -1.71
NDC80	YIL144W	YOR131C	Q12486	218 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	RKM4	Q12504	494 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	PTC5	Q12511	572 aa		4.37	□□□□□ -1.71
NDC80	YIL144W	MCM7	P38132	845 aa		4.36	□□□□□ -1.71
NDC80	YIL144W	DSE4	P53753	1117 aa		4.36	□□□□□ -1.71
NDC80	YIL144W	FAR11	P53917	953 aa		4.36	□□□□□ -1.71
NDC80	YIL144W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	RIP-Chip
NDC80	YIL144W	TAF8	Q03750	510 aa		4.36	□□□□□ -1.71
NDC80	YIL144W	UBX5	Q06682	500 aa		4.36	□□□□□ -1.71
NDC80	YIL144W	YER152C	P10356	443 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 71.9 ms