RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	NFS1	P25374	497 aa		4.69	□□□□□ -1.66
VHR1	YIL056W	NNK1	P36003	928 aa		4.69	□□□□□ -1.66
VHR1	YIL056W	GCR1	P07261	785 aa		4.68	□□□□□ -1.66
VHR1	YIL056W	TAF13	P11747	167 aa		4.68	□□□□□ -1.66
VHR1	YIL056W	SAF1	P38352	637 aa		4.68	□□□□□ -1.66
VHR1	YIL056W	RPS4A	P0CX35	261 aa	Known RBP	4.68	□□□□□ -1.66
VHR1	YIL056W	RPS4B	P0CX36	261 aa	Known RBP	4.68	□□□□□ -1.66
VHR1	YIL056W	MSH4	P40965	878 aa	Predicted RBP	4.68	□□□□□ -1.66
VHR1	YIL056W	MMM1	P41800	426 aa		4.68	□□□□□ -1.66
VHR1	YIL056W	HDA2	Q06629	674 aa		4.68	□□□□□ -1.66
VHR1	YIL056W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
VHR1	YIL056W	RTT10	Q08924	1013 aa		4.68	□□□□□ -1.66
VHR1	YIL056W	MNR2	P35724	969 aa		4.67	□□□□□ -1.66
VHR1	YIL056W	ROD1	Q02805	837 aa		4.67	□□□□□ -1.66
VHR1	YIL056W	TMA46	Q12000	345 aa	Known RBP	4.67	□□□□□ -1.66
VHR1	YIL056W	RET1	P22276	1149 aa	Known RBP	4.66	□□□□□ -1.66
VHR1	YIL056W	SMY2	P32909	740 aa	Known RBP	4.66	□□□□□ -1.66
VHR1	YIL056W	WHI3	P34761	661 aa	Known RBP	4.66	□□□□□ -1.66
VHR1	YIL056W	NMD3	P38861	518 aa	Known RBP	4.66	□□□□□ -1.66
VHR1	YIL056W	YGR130C	P53278	816 aa		4.66	□□□□□ -1.66
VHR1	YIL056W	TPP1	Q03796	238 aa		4.66	□□□□□ -1.66
VHR1	YIL056W	YLR257W	Q06146	321 aa	Known RBP	4.66	□□□□□ -1.66
VHR1	YIL056W	PTC5	Q12511	572 aa		4.66	□□□□□ -1.66
VHR1	YIL056W	VPS53	P47061	822 aa		4.66	□□□□□ -1.66
VHR1	YIL056W	HRK1	Q08732	759 aa	Known RBP	4.66	□□□□□ -1.66
VHR1	YIL056W	CIT3	P43635	486 aa		4.65	□□□□□ -1.67
VHR1	YIL056W	RKM2	Q03942	479 aa		4.65	□□□□□ -1.67
VHR1	YIL056W	MSB1	P21339	1137 aa	Known RBP	4.64	□□□□□ -1.67
VHR1	YIL056W	SIW14	P53965	281 aa		4.64	□□□□□ -1.67
VHR1	YIL056W	RCM1	P53972	490 aa		4.64	□□□□□ -1.67
VHR1	YIL056W	GDE1	Q02979	1223 aa		4.64	□□□□□ -1.67
VHR1	YIL056W	RSA3	Q05942	220 aa	Known RBP	4.64	□□□□□ -1.67
VHR1	YIL056W	YLR122C	Q12312	125 aa		4.64	□□□□□ -1.67
VHR1	YIL056W	PAM1	P37304	830 aa	Known RBP	4.64	□□□□□ -1.67
VHR1	YIL056W	RDH54	P38086	958 aa		4.64	□□□□□ -1.67
VHR1	YIL056W	MCM7	P38132	845 aa		4.64	□□□□□ -1.67
VHR1	YIL056W	YOR059C	Q08448	450 aa	Known RBP	4.64	□□□□□ -1.67
VHR1	YIL056W	SYP1	P25623	870 aa	Known RBP	4.63	□□□□□ -1.67
VHR1	YIL056W	ALG3	P38179	458 aa		4.63	□□□□□ -1.67
VHR1	YIL056W	QNS1	P38795	714 aa	Known RBP	4.63	□□□□□ -1.67
VHR1	YIL056W	VAC8	P39968	578 aa		4.63	□□□□□ -1.67
VHR1	YIL056W	KRI1	P42846	591 aa	Known RBP	4.63	□□□□□ -1.67
VHR1	YIL056W	MED7	Q08278	222 aa		4.63	□□□□□ -1.67
VHR1	YIL056W	HEM13	P11353	328 aa	Known RBP	4.62	□□□□□ -1.67
VHR1	YIL056W	CDC34	P14682	295 aa		4.62	□□□□□ -1.67
VHR1	YIL056W	ENT3	P47160	408 aa		4.62	□□□□□ -1.67
VHR1	YIL056W	ALO1	P54783	526 aa	Known RBP	4.62	□□□□□ -1.67
VHR1	YIL056W	RAT1	Q02792	1006 aa	Known RBP	4.62	□□□□□ -1.67
VHR1	YIL056W	SPO20	Q04359	397 aa		4.62	□□□□□ -1.67
VHR1	YIL056W	PUS7	Q08647	676 aa	Known RBP	4.62	□□□□□ -1.67
VHR1	YIL056W	CYC7	P00045	113 aa		4.62	□□□□□ -1.67
VHR1	YIL056W	MKK2	P32491	506 aa		4.62	□□□□□ -1.67
VHR1	YIL056W	MAC1	P35192	417 aa		4.62	□□□□□ -1.67
VHR1	YIL056W	FAL1	Q12099	399 aa	Known RBP	4.62	□□□□□ -1.67
VHR1	YIL056W	LIP5	P32875	414 aa		4.61	□□□□□ -1.67
VHR1	YIL056W	PGM1	P33401	570 aa	Known RBP	4.61	□□□□□ -1.67
VHR1	YIL056W	ALT1	P52893	592 aa		4.61	□□□□□ -1.67
VHR1	YIL056W	ALD6	P54115	500 aa	Known RBP	4.61	□□□□□ -1.67
VHR1	YIL056W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
VHR1	YIL056W	VPS16	Q03308	798 aa		4.61	□□□□□ -1.67
VHR1	YIL056W	PIN2	Q12057	282 aa		4.61	□□□□□ -1.67
VHR1	YIL056W	OMA1	P36163	345 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	CNN1	P43618	361 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	EAR1	Q03212	550 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	WRS1	Q12109	432 aa	Known RBP	4.6	□□□□□ -1.67
VHR1	YIL056W	RER2	P35196	286 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	TOS1	P38288	455 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	GPB2	P39717	880 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	YJL045W	P47052	634 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	FAA4	P47912	694 aa	Known RBP	4.6	□□□□□ -1.67
VHR1	YIL056W	TYW3	P53177	273 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	SPO21	Q12411	609 aa		4.6	□□□□□ -1.67
VHR1	YIL056W	COQ4	O13525	335 aa		4.59	□□□□□ -1.67
VHR1	YIL056W	PRI2	P20457	528 aa		4.59	□□□□□ -1.67
VHR1	YIL056W	BAS1	P22035	811 aa		4.59	□□□□□ -1.67
VHR1	YIL056W	KIP1	P28742	1111 aa		4.59	□□□□□ -1.67
VHR1	YIL056W	MLS1	P30952	554 aa		4.59	□□□□□ -1.67
VHR1	YIL056W	LYP1	P32487	611 aa		4.59	□□□□□ -1.67
VHR1	YIL056W	YHL012W	P38709	493 aa		4.59	□□□□□ -1.67
VHR1	YIL056W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
VHR1	YIL056W	TRP3	P00937	484 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	DBP5	P20449	482 aa	Known RBP	4.58	□□□□□ -1.68
VHR1	YIL056W	AFG2	P32794	780 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	MOT2	P34909	587 aa	Known RBP	4.58	□□□□□ -1.68
VHR1	YIL056W	SNF7	P39929	240 aa	Known RBP	4.58	□□□□□ -1.68
VHR1	YIL056W	HNT2	P49775	206 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	RSB1	Q08417	382 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	YPL260W	Q08977	551 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	YVC1	Q12324	675 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	TRP2	P00899	507 aa	Known RBP	4.58	□□□□□ -1.68
VHR1	YIL056W	PRO1	P32264	428 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	GTS1	P40956	396 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	AOS1	Q06624	347 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	NBA1	Q08229	501 aa	Known RBP	4.58	□□□□□ -1.68
VHR1	YIL056W	TRE1	Q08919	783 aa		4.58	□□□□□ -1.68
VHR1	YIL056W	INO1	P11986	533 aa		4.57	□□□□□ -1.68
VHR1	YIL056W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
VHR1	YIL056W	RGD1	P38339	666 aa		4.57	□□□□□ -1.68
VHR1	YIL056W	HXT13	P39924	564 aa		4.57	□□□□□ -1.68
VHR1	YIL056W	GNP1	P48813	663 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 33 ms