RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
SWC4YGR002C GCR1P07261 785 aa4.51□□□□□ -1.69
SWC4YGR002C VMA4P22203 233 aaKnown RBP4.51□□□□□ -1.69
SWC4YGR002C LIP5P32875 414 aa4.51□□□□□ -1.69
SWC4YGR002C WHI3P34761 661 aaKnown RBP4.51□□□□□ -1.69
SWC4YGR002C YKR073CP36153 106 aa4.51□□□□□ -1.69
SWC4YGR002C ARL1P38116 183 aaKnown RBP4.51□□□□□ -1.69
SWC4YGR002C TOS1P38288 455 aa4.51□□□□□ -1.69
SWC4YGR002C YGR045CP53229 120 aa4.51□□□□□ -1.69
SWC4YGR002C YNR063WP53749 607 aa4.51□□□□□ -1.69
SWC4YGR002C UTP5Q04177 643 aaKnown RBP4.51□□□□□ -1.69
SWC4YGR002C HDA2Q06629 674 aa4.51□□□□□ -1.69
SWC4YGR002C NSI1Q12457 570 aa4.51□□□□□ -1.69
SWC4YGR002C RPS4AP0CX35 261 aaKnown RBP4.5□□□□□ -1.69
SWC4YGR002C RPS4BP0CX36 261 aaKnown RBP4.5□□□□□ -1.69
SWC4YGR002C RDH54P38086 958 aa4.5□□□□□ -1.69
SWC4YGR002C MSH4P40965 878 aaPredicted RBP4.5□□□□□ -1.69
SWC4YGR002C CIT3P43635 486 aa4.5□□□□□ -1.69
SWC4YGR002C NRD1P53617 575 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SWC4YGR002C NAP1P25293 417 aaKnown RBP4.49□□□□□ -1.69
SWC4YGR002C NFS1P25374 497 aa4.49□□□□□ -1.69
SWC4YGR002C YAR028WP39548 234 aa4.49□□□□□ -1.69
SWC4YGR002C ROD1Q02805 837 aa4.49□□□□□ -1.69
SWC4YGR002C VPS16Q03308 798 aa4.49□□□□□ -1.69
SWC4YGR002C CDC34P14682 295 aa4.48□□□□□ -1.69
SWC4YGR002C CLN2P20438 545 aa4.48□□□□□ -1.69
SWC4YGR002C SMY2P32909 740 aaKnown RBP4.48□□□□□ -1.69
SWC4YGR002C MNR2P35724 969 aa4.48□□□□□ -1.69
SWC4YGR002C NNK1P36003 928 aa4.48□□□□□ -1.69
SWC4YGR002C EST2Q06163 884 aa4.48□□□□□ -1.69
SWC4YGR002C RTT10Q08924 1013 aa4.48□□□□□ -1.69
SWC4YGR002C LAP2Q10740 671 aa4.48□□□□□ -1.69
SWC4YGR002C TAF13P11747 167 aa4.47□□□□□ -1.69
SWC4YGR002C ADD66P36040 267 aa4.47□□□□□ -1.69
SWC4YGR002C HSE1P38753 452 aa4.47□□□□□ -1.69
SWC4YGR002C GNP1P48813 663 aa4.47□□□□□ -1.69
SWC4YGR002C CWC24P53769 259 aa4.47□□□□□ -1.69
SWC4YGR002C RCM1P53972 490 aa4.47□□□□□ -1.69
SWC4YGR002C ALD6P54115 500 aaKnown RBP4.47□□□□□ -1.69
SWC4YGR002C YOR059CQ08448 450 aaKnown RBP4.47□□□□□ -1.69
SWC4YGR002C PIN2Q12057 282 aa4.47□□□□□ -1.69
SWC4YGR002C RAD27P26793 382 aa4.46□□□□□ -1.69
SWC4YGR002C DUT1P33317 147 aa4.46□□□□□ -1.69
SWC4YGR002C VAC8P39968 578 aa4.46□□□□□ -1.69
SWC4YGR002C INP52P50942 1183 aa4.46□□□□□ -1.69
SWC4YGR002C SIW14P53965 281 aa4.46□□□□□ -1.69
SWC4YGR002C GDE1Q02979 1223 aa4.46□□□□□ -1.69
SWC4YGR002C MAG2Q06436 670 aaKnown RBP4.46□□□□□ -1.69
SWC4YGR002C PUB1P32588 453 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
SWC4YGR002C NMD3P38861 518 aaKnown RBP4.46□□□□□ -1.7
SWC4YGR002C HXT13P39924 564 aa4.46□□□□□ -1.7
SWC4YGR002C FAA4P47912 694 aaKnown RBP4.46□□□□□ -1.7
SWC4YGR002C ALT1P52893 592 aa4.46□□□□□ -1.7
SWC4YGR002C HXT17P53631 564 aa4.46□□□□□ -1.7
SWC4YGR002C HXT15P54854 567 aa4.46□□□□□ -1.7
SWC4YGR002C SDH1Q00711 640 aa4.46□□□□□ -1.7
SWC4YGR002C RAT1Q02792 1006 aaKnown RBP4.46□□□□□ -1.7
SWC4YGR002C EAR1Q03212 550 aa4.46□□□□□ -1.7
SWC4YGR002C TPP1Q03796 238 aa4.46□□□□□ -1.7
SWC4YGR002C BRE4Q07660 1125 aa4.46□□□□□ -1.7
SWC4YGR002C GCD1P09032 578 aaPredicted RBP4.45□□□□□ -1.7
SWC4YGR002C RET1P22276 1149 aaKnown RBP4.45□□□□□ -1.7
SWC4YGR002C MKK2P32491 506 aa4.45□□□□□ -1.7
SWC4YGR002C AFG2P32794 780 aa4.45□□□□□ -1.7
SWC4YGR002C EEB1Q02891 456 aa4.45□□□□□ -1.7
SWC4YGR002C RKM2Q03942 479 aa4.45□□□□□ -1.7
SWC4YGR002C YLR257WQ06146 321 aaKnown RBP4.45□□□□□ -1.7
SWC4YGR002C TMA46Q12000 345 aaKnown RBP4.45□□□□□ -1.7
SWC4YGR002C RER2P35196 286 aa4.44□□□□□ -1.7
SWC4YGR002C PUS7Q08647 676 aaKnown RBP4.44□□□□□ -1.7
SWC4YGR002C YVC1Q12324 675 aa4.44□□□□□ -1.7
SWC4YGR002C TRP2P00899 507 aaKnown RBP4.43□□□□□ -1.7
SWC4YGR002C PRI2P20457 528 aa4.43□□□□□ -1.7
SWC4YGR002C ALG3P38179 458 aa4.43□□□□□ -1.7
SWC4YGR002C ENT3P47160 408 aa4.43□□□□□ -1.7
SWC4YGR002C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SWC4YGR002C RSA3Q05942 220 aaKnown RBP4.43□□□□□ -1.7
SWC4YGR002C HRK1Q08732 759 aaKnown RBP4.43□□□□□ -1.7
SWC4YGR002C PTC5Q12511 572 aa4.43□□□□□ -1.7
SWC4YGR002C SYP1P25623 870 aaKnown RBP4.42□□□□□ -1.7
SWC4YGR002C OYE3P41816 400 aaPredicted RBP4.42□□□□□ -1.7
SWC4YGR002C CTH1P47976 325 aa4.42□□□□□ -1.7
SWC4YGR002C AOS1Q06624 347 aa4.42□□□□□ -1.7
SWC4YGR002C TRE1Q08919 783 aa4.42□□□□□ -1.7
SWC4YGR002C MOT2P34909 587 aaKnown RBP4.41□□□□□ -1.7
SWC4YGR002C QNS1P38795 714 aaKnown RBP4.41□□□□□ -1.7
SWC4YGR002C CNN1P43618 361 aa4.41□□□□□ -1.7
SWC4YGR002C VPS53P47061 822 aa4.41□□□□□ -1.7
SWC4YGR002C YGR053CP53234 283 aa4.41□□□□□ -1.7
SWC4YGR002C FAL1Q12099 399 aaKnown RBP4.41□□□□□ -1.7
SWC4YGR002C DBP5P20449 482 aaKnown RBP4.4□□□□□ -1.7
SWC4YGR002C BAS1P22035 811 aa4.4□□□□□ -1.7
SWC4YGR002C ADP1P25371 1049 aa4.4□□□□□ -1.7
SWC4YGR002C PRO1P32264 428 aa4.4□□□□□ -1.7
SWC4YGR002C LYP1P32487 611 aa4.4□□□□□ -1.7
SWC4YGR002C MCM7P38132 845 aa4.4□□□□□ -1.7
SWC4YGR002C GPB2P39717 880 aa4.4□□□□□ -1.7
SWC4YGR002C YJL045WP47052 634 aa4.4□□□□□ -1.7
SWC4YGR002C TYW3P53177 273 aa4.4□□□□□ -1.7
SWC4YGR002C TIF35Q04067 274 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms