RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W TPP1Q03796 238 aa4.51□□□□□ -1.69
LIF1YGL090W GSF2Q04697 403 aaKnown RBP4.51□□□□□ -1.69
LIF1YGL090W YCS4Q06156 1176 aa4.51□□□□□ -1.69
LIF1YGL090W NNK1P36003 928 aa4.5□□□□□ -1.69
LIF1YGL090W SNU71P53207 620 aaKnown RBP4.5□□□□□ -1.69
LIF1YGL090W TOS4Q06266 489 aa4.5□□□□□ -1.69
LIF1YGL090W PUS7Q08647 676 aaKnown RBP4.5□□□□□ -1.69
LIF1YGL090W MSH3P25336 1018 aa4.49□□□□□ -1.69
LIF1YGL090W YAR028WP39548 234 aa4.49□□□□□ -1.69
LIF1YGL090W UTP5Q04177 643 aaKnown RBP4.49□□□□□ -1.69
LIF1YGL090W RET1P22276 1149 aaKnown RBP4.48□□□□□ -1.69
LIF1YGL090W ARL1P38116 183 aaKnown RBP4.48□□□□□ -1.69
LIF1YGL090W CIC1P38779 376 aaKnown RBP4.48□□□□□ -1.69
LIF1YGL090W DAL4Q04895 635 aa4.48□□□□□ -1.69
LIF1YGL090W YLR257WQ06146 321 aaKnown RBP4.48□□□□□ -1.69
LIF1YGL090W PRP40P33203 583 aaKnown RBP4.47□□□□□ -1.69
LIF1YGL090W ETP1P38748 585 aaKnown RBP4.47□□□□□ -1.69
LIF1YGL090W XKS1P42826 600 aa4.47□□□□□ -1.69
LIF1YGL090W MTR4P47047 1073 aaKnown RBP4.47□□□□□ -1.69
LIF1YGL090W RSM26P47141 266 aa4.47□□□□□ -1.69
LIF1YGL090W YDL177CQ12257 170 aa4.47□□□□□ -1.69
LIF1YGL090W PHO4P07270 312 aaKnown RBP4.46□□□□□ -1.7
LIF1YGL090W MET4P32389 672 aa4.46□□□□□ -1.7
LIF1YGL090W TOD6P34219 525 aa4.46□□□□□ -1.7
LIF1YGL090W SHU2P38957 223 aa4.46□□□□□ -1.7
LIF1YGL090W ULP1Q02724 621 aa4.46□□□□□ -1.7
LIF1YGL090W NOG1Q02892 647 aaKnown RBP4.46□□□□□ -1.7
LIF1YGL090W SOD2P00447 233 aa4.45□□□□□ -1.7
LIF1YGL090W DAK2P43550 591 aa4.45□□□□□ -1.7
LIF1YGL090W RSA3Q05942 220 aaKnown RBP4.45□□□□□ -1.7
LIF1YGL090W SQT1P35184 431 aa4.44□□□□□ -1.7
LIF1YGL090W ABZ1P37254 787 aaPredicted RBP4.44□□□□□ -1.7
LIF1YGL090W YHL012WP38709 493 aa4.44□□□□□ -1.7
LIF1YGL090W PEX28P38848 579 aa4.44□□□□□ -1.7
LIF1YGL090W THI12P42883 340 aa4.44□□□□□ -1.7
LIF1YGL090W THI5P43534 340 aa4.44□□□□□ -1.7
LIF1YGL090W THI11P47183 340 aa4.44□□□□□ -1.7
LIF1YGL090W THI13Q07748 340 aa4.44□□□□□ -1.7
LIF1YGL090W WHI5Q12416 295 aa4.44□□□□□ -1.7
LIF1YGL090W TAD3Q9URQ3 322 aa4.44□□□□□ -1.7
LIF1YGL090W HEM13P11353 328 aaKnown RBP4.43□□□□□ -1.7
LIF1YGL090W SAM35P14693 329 aa4.43□□□□□ -1.7
LIF1YGL090W YJL045WP47052 634 aa4.43□□□□□ -1.7
LIF1YGL090W YPL277CQ08989 487 aa4.43□□□□□ -1.7
LIF1YGL090W RPS13P05756 151 aaKnown RBP4.42□□□□□ -1.7
LIF1YGL090W AIM26P32858 118 aa4.42□□□□□ -1.7
LIF1YGL090W ATG14P38270 344 aa4.42□□□□□ -1.7
LIF1YGL090W SSF1P38789 453 aaPredicted RBP4.42□□□□□ -1.7
LIF1YGL090W FAA3P39002 694 aa4.42□□□□□ -1.7
LIF1YGL090W DOS2P54858 310 aa4.42□□□□□ -1.7
LIF1YGL090W ASF1P32447 279 aa4.41□□□□□ -1.7
LIF1YGL090W GCD6P32501 712 aaKnown RBP4.41□□□□□ -1.7
LIF1YGL090W VPS35P34110 944 aa4.41□□□□□ -1.7
LIF1YGL090W FOL2P51601 243 aaKnown RBP4.41□□□□□ -1.7
LIF1YGL090W LAP2Q10740 671 aa4.41□□□□□ -1.7
LIF1YGL090W YTA7P40340 1379 aa4.4□□□□□ -1.7
LIF1YGL090W YLR358CO13565 187 aa4.4□□□□□ -1.71
LIF1YGL090W TUB2P02557 457 aaKnown RBP4.4□□□□□ -1.71
LIF1YGL090W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
LIF1YGL090W DED1P06634 604 aaKnown RBP4.4□□□□□ -1.71
LIF1YGL090W VMA4P22203 233 aaKnown RBP4.4□□□□□ -1.71
LIF1YGL090W SLD2P34252 453 aa4.4□□□□□ -1.71
LIF1YGL090W QNS1P38795 714 aaKnown RBP4.4□□□□□ -1.71
LIF1YGL090W YGL140CP53120 1219 aa4.4□□□□□ -1.71
LIF1YGL090W SNO2P53823 222 aa4.4□□□□□ -1.71
LIF1YGL090W SUB1P54000 292 aaKnown RBP4.4□□□□□ -1.71
LIF1YGL090W CLU1Q03690 1277 aaKnown RBP4.4□□□□□ -1.71
LIF1YGL090W PNS1Q12412 539 aa4.4□□□□□ -1.71
LIF1YGL090W KAR2P16474 682 aaKnown RBP4.39□□□□□ -1.71
LIF1YGL090W RPT1P33299 467 aaKnown RBP4.39□□□□□ -1.71
LIF1YGL090W SHM2P37291 469 aaKnown RBP4.39□□□□□ -1.71
LIF1YGL090W RDH54P38086 958 aa4.39□□□□□ -1.71
LIF1YGL090W HSE1P38753 452 aa4.39□□□□□ -1.71
LIF1YGL090W GPB2P39717 880 aa4.39□□□□□ -1.71
LIF1YGL090W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71 RIP-Chip
LIF1YGL090W RCL1Q08096 367 aaPredicted RBP4.39□□□□□ -1.71
LIF1YGL090W MSC6Q08818 692 aaKnown RBP4.39□□□□□ -1.71
LIF1YGL090W ADD66P36040 267 aa4.38□□□□□ -1.71
LIF1YGL090W PPX1P38698 397 aa4.38□□□□□ -1.71
LIF1YGL090W YPL109CQ02981 657 aa4.38□□□□□ -1.71
LIF1YGL090W HRK1Q08732 759 aaKnown RBP4.38□□□□□ -1.71
LIF1YGL090W OXR1Q08952 273 aa4.38□□□□□ -1.71
LIF1YGL090W AFG2P32794 780 aa4.37□□□□□ -1.71
LIF1YGL090W MDL2P33311 773 aa4.37□□□□□ -1.71
LIF1YGL090W MNN4P36044 1178 aa4.37□□□□□ -1.71
LIF1YGL090W PAM1P37304 830 aaKnown RBP4.37□□□□□ -1.71
LIF1YGL090W BRN1P38170 754 aa4.37□□□□□ -1.71
LIF1YGL090W IPL1P38991 367 aa4.37□□□□□ -1.71
LIF1YGL090W NUG1P40010 520 aaKnown RBP4.37□□□□□ -1.71
LIF1YGL090W PIC2P40035 300 aa4.37□□□□□ -1.71
LIF1YGL090W ADI1Q03677 179 aa4.37□□□□□ -1.71
LIF1YGL090W CTS1P29029 562 aa4.36□□□□□ -1.71
LIF1YGL090W YSC84P32793 468 aa4.36□□□□□ -1.71
LIF1YGL090W SWE1P32944 819 aa4.36□□□□□ -1.71
LIF1YGL090W MET10P39692 1035 aa4.36□□□□□ -1.71
LIF1YGL090W VPS72Q03388 795 aa4.36□□□□□ -1.71
LIF1YGL090W EST2Q06163 884 aa4.36□□□□□ -1.71
LIF1YGL090W HXK1P04806 485 aaKnown RBP4.35□□□□□ -1.71
LIF1YGL090W PRE10P21242 288 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
LIF1YGL090W KIP1P28742 1111 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms